BLASTX nr result
ID: Cocculus22_contig00030238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00030238
(437 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEW07558.1| hypothetical protein 0_5075_01, partial [Pinus la... 60 4e-07
gb|AFG60447.1| hypothetical protein 0_5075_01, partial [Pinus ta... 58 1e-06
gb|AEW07559.1| hypothetical protein 0_5075_01, partial [Pinus ra... 58 1e-06
gb|ABR18161.1| unknown [Picea sitchensis] 57 2e-06
gb|ABR17177.1| unknown [Picea sitchensis] 57 2e-06
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec... 56 6e-06
>gb|AEW07558.1| hypothetical protein 0_5075_01, partial [Pinus lambertiana]
Length = 130
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +1
Query: 244 SAARMSLLFGGAAALRPSGDLISDFSPS--DERQPDYGYSKPFVVLDVIWNFAFVLVSIV 417
SAAR GG +R L+ + + +ERQ D+ YSKP V+LD++WN +FV+VS+V
Sbjct: 32 SAARFIRRAGGRRMMREPSMLVRENAAQQLEERQSDWAYSKPVVILDILWNLSFVVVSVV 91
Query: 418 VLMSTL 435
+L STL
Sbjct: 92 ILSSTL 97
>gb|AFG60447.1| hypothetical protein 0_5075_01, partial [Pinus taeda]
gi|383156392|gb|AFG60448.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156393|gb|AFG60449.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156394|gb|AFG60450.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156395|gb|AFG60451.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156396|gb|AFG60452.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156397|gb|AFG60453.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156398|gb|AFG60454.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156399|gb|AFG60455.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156400|gb|AFG60456.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156401|gb|AFG60457.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156402|gb|AFG60458.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156403|gb|AFG60459.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156404|gb|AFG60460.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156405|gb|AFG60461.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156406|gb|AFG60462.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156407|gb|AFG60463.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
gi|383156408|gb|AFG60464.1| hypothetical protein
0_5075_01, partial [Pinus taeda]
Length = 130
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +1
Query: 244 SAARMSLLFGGAAALRPSGDLISDFSPS--DERQPDYGYSKPFVVLDVIWNFAFVLVSIV 417
SA+R GG +R L+ + + +ERQ D+ YSKP ++LD++WN +FV+VS+V
Sbjct: 32 SASRFIRRAGGRRMMREPSMLVRENAAQQLEERQSDWAYSKPVIILDILWNLSFVVVSVV 91
Query: 418 VLMSTL 435
+L STL
Sbjct: 92 ILSSTL 97
>gb|AEW07559.1| hypothetical protein 0_5075_01, partial [Pinus radiata]
Length = 130
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +1
Query: 244 SAARMSLLFGGAAALRPSGDLISDFSPS--DERQPDYGYSKPFVVLDVIWNFAFVLVSIV 417
SA+R GG +R L+ + + +ERQ D+ YSKP ++LD++WN +FV+VS+V
Sbjct: 32 SASRFIRRAGGRRMMREPSMLVRENAAQQLEERQSDWAYSKPVIILDILWNLSFVVVSVV 91
Query: 418 VLMSTL 435
+L STL
Sbjct: 92 ILSSTL 97
>gb|ABR18161.1| unknown [Picea sitchensis]
Length = 373
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +1
Query: 244 SAARMSLLFGGAAALRPSGDLISDFSPS--DERQPDYGYSKPFVVLDVIWNFAFVLVSIV 417
SAAR GG +R ++ + + +ERQ D+ YSKP V+LD++WN +FV+VS+V
Sbjct: 32 SAARFLRRAGGRRMMREPSMMVRENAAQQLEERQSDWAYSKPVVMLDLLWNLSFVVVSVV 91
Query: 418 VLMSTL 435
+L STL
Sbjct: 92 ILTSTL 97
>gb|ABR17177.1| unknown [Picea sitchensis]
Length = 373
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +1
Query: 244 SAARMSLLFGGAAALRPSGDLISDFSPS--DERQPDYGYSKPFVVLDVIWNFAFVLVSIV 417
SAAR GG +R ++ + + +ERQ D+ YSKP V+LD++WN +FV+VS+V
Sbjct: 32 SAARFLRRAGGRRMMREPSMMVRENAAQQLEERQSDWAYSKPVVMLDLLWNLSFVVVSVV 91
Query: 418 VLMSTL 435
+L STL
Sbjct: 92 ILTSTL 97
>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Fragaria vesca subsp. vesca]
Length = 1009
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Frame = +1
Query: 238 TDSAARMSLLFGGAAALRPSGDLISDFSPS--DERQPDYGYSKPFVVLDVIWNFAFVLVS 411
T A +++L G A R L+ + + DER+ D+GYSKP V LD++WN AFV+VS
Sbjct: 683 TTRPATLAMLLGRATGRRGPSMLVRETAARELDERRADWGYSKPVVALDMMWNTAFVVVS 742
Query: 412 IVVLMST 432
+V+L+ T
Sbjct: 743 VVMLILT 749