BLASTX nr result
ID: Cocculus22_contig00030220
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00030220
(349 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608... 54 4e-13
ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614... 55 4e-13
ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617... 54 1e-12
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607... 57 1e-12
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] 62 1e-07
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi... 60 3e-07
gb|AAD20432.1| putative retroelement pol polyprotein [Arabidopsi... 59 7e-07
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o... 58 2e-06
gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana] 57 3e-06
emb|CAN81323.1| hypothetical protein VITISV_019409 [Vitis vinifera] 56 6e-06
emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera] 55 1e-05
>ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608416 [Citrus sinensis]
Length = 1313
Score = 53.9 bits (128), Expect(2) = 4e-13
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = -1
Query: 166 KGKAYRLLQEQHNTFAWSHKDMPGIDLSIASHRLNTDPTVRPVKQKKRSLGNQK 5
K + + LQ + FAWSH+DMPGID IA H+L RPV+QK+R +++
Sbjct: 663 KTELVKCLQSHADIFAWSHEDMPGIDRRIACHKLAVKKGARPVRQKRRCFNHKR 716
Score = 45.8 bits (107), Expect(2) = 4e-13
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 348 GDQRESRSCYTVSVNH--HVNCLDIPSTLRDARGEVAETLEEVQIG-SGPDQTDKIGGGL 178
GDQR +RSCY + V LD ++ R E E LEEV + S P + K+G L
Sbjct: 599 GDQRMARSCYATAAKETLQVTSLDNRGDSKNGRQEPVEKLEEVVVSRSDPSRVVKVGSEL 658
Query: 177 ARDIKAKLI 151
R+IK +L+
Sbjct: 659 GREIKTELV 667
>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
Length = 1089
Score = 55.5 bits (132), Expect(2) = 4e-13
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = -1
Query: 166 KGKAYRLLQEQHNTFAWSHKDMPGIDLSIASHRLNTDPTVRPVKQKKRSLGNQK 5
K + + LQ + FAWSH+DMPGID IA H+L RPV+QK+R +++
Sbjct: 651 KAELVKCLQSHADVFAWSHEDMPGIDRGIACHKLAVKRGARPVRQKRRCFNHER 704
Score = 44.3 bits (103), Expect(2) = 4e-13
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = -2
Query: 348 GDQRESRSCYTVSVNH--HVNCLDIPSTLRDARGEVAETLEEVQIG-SGPDQTDKIGGGL 178
GDQR +RSCY + V LD ++ R E E LEEV I S P + K+G L
Sbjct: 587 GDQRMARSCYATAAKETLQVTSLDNRGDSKNGRQEPVEKLEEVVISRSDPSRVVKVGSEL 646
Query: 177 ARDIKAKLI 151
IKA+L+
Sbjct: 647 GEAIKAELV 655
>ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617447 [Citrus sinensis]
Length = 1100
Score = 53.5 bits (127), Expect(2) = 1e-12
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = -1
Query: 166 KGKAYRLLQEQHNTFAWSHKDMPGIDLSIASHRLNTDPTVRPVKQKKRSLGNQK 5
+GK + LQ + + FAWSH+D PGI+ +A H+L RPV+QK+R ++
Sbjct: 517 RGKLVKCLQSRADIFAWSHEDTPGINRGVACHKLAIKKEARPVRQKRRCFNQER 570
Score = 45.1 bits (105), Expect(2) = 1e-12
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -2
Query: 348 GDQRESRSCYTVSVNH--HVNCLDIPSTLRDARGEVAETLEEVQIG-SGPDQTDKIGGGL 178
GDQR +RSCY + V LD + R E E LEEV + S P + KIG GL
Sbjct: 453 GDQRMARSCYATAAKETLQVTSLDNRGDSKKGRQEPVEKLEEVAVSKSNPSRVVKIGSGL 512
Query: 177 ARDIKAKLI 151
++ KL+
Sbjct: 513 VGAVRGKLV 521
>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
Length = 1866
Score = 57.4 bits (137), Expect(2) = 1e-12
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = -1
Query: 166 KGKAYRLLQEQHNTFAWSHKDMPGIDLSIASHRLNTDPTVRPVKQKKRSLGNQK 5
KG+ + LQ + FAWSH+DMPGID IA H+L RPV+QK+R +++
Sbjct: 818 KGELVKCLQSHADIFAWSHEDMPGIDRGIACHKLAVKRGARPVRQKRRCFNHER 871
Score = 40.8 bits (94), Expect(2) = 1e-12
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -2
Query: 348 GDQRESRSCYTVSVNH--HVNCLDIPSTLRDARGEVAETLEEVQIG-SGPDQTDKIGGGL 178
GDQR +RSCY + V LD ++ R E E L+EV + S P + K+G L
Sbjct: 754 GDQRMARSCYATAAKETLQVTSLDNRGDSKNGRQEPVEKLKEVVVSRSDPSKVVKVGSEL 813
Query: 177 ARDIKAKLI 151
IK +L+
Sbjct: 814 GEAIKGELV 822
>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = -1
Query: 148 LLQEQHNTFAWSHKDMPGIDLSIASHRLNTDPTVRPVKQKKRSLGNQKS 2
LL+ TFAWS +DM GID +I +H LN DPT +PVKQK+R LG +++
Sbjct: 789 LLKRNSKTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQKRRKLGPERA 837
>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1787
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = -1
Query: 145 LQEQHNTFAWSHKDMPGIDLSIASHRLNTDPTVRPVKQKKRSLGNQKS 2
L++ TFAWS +DMPGID ++ H LN DPT +P+KQK+R LG ++
Sbjct: 748 LRQNAATFAWSVEDMPGIDSAVTCHELNVDPTYKPLKQKRRKLGPDRT 795
>gb|AAD20432.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 152
Score = 58.9 bits (141), Expect = 7e-07
Identities = 22/43 (51%), Positives = 33/43 (76%)
Frame = -1
Query: 130 NTFAWSHKDMPGIDLSIASHRLNTDPTVRPVKQKKRSLGNQKS 2
+TF WS +D+PG+ + I +H LN DPT +PVKQK+R LG +++
Sbjct: 4 STFVWSPEDLPGVSVEIVAHELNVDPTFKPVKQKRRKLGRERA 46
>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
Length = 1181
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = -1
Query: 181 LS*RYKGKAYRLLQEQHNTFAWSHKDMPGIDLSIASHRLNTDPTVRPVKQKKR 23
LS K L++E + FAW+++DMPG+D +A HRLN DP V+PVKQ++R
Sbjct: 636 LSSSEKENLISLIREYIDVFAWNYEDMPGLDPKVAMHRLNIDPDVKPVKQQQR 688
>gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]
Length = 755
Score = 56.6 bits (135), Expect = 3e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -1
Query: 145 LQEQHNTFAWSHKDMPGIDLSIASHRLNTDPTVRPVKQKKRSLGNQKS 2
L+E N FAWS +D+PG+ + + SH L D T +P+KQK+R LG +++
Sbjct: 463 LKENVNAFAWSPEDLPGVSVDVVSHELIIDSTFKPIKQKRRKLGRERA 510
>emb|CAN81323.1| hypothetical protein VITISV_019409 [Vitis vinifera]
Length = 2174
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = -1
Query: 151 RLLQEQHNTFAWSHKDMPGIDLSIASHRLNTDPTVRPVKQKKRSL 17
+LL+ N FAWS++DMPG+D SI HRL P VRPVKQK R L
Sbjct: 1126 QLLRSYLNVFAWSYEDMPGLDPSIVQHRLPLLPHVRPVKQKLRRL 1170
>emb|CAN71857.1| hypothetical protein VITISV_012968 [Vitis vinifera]
Length = 781
Score = 55.1 bits (131), Expect = 1e-05
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -1
Query: 145 LQEQHNTFAWSHKDMPGIDLSIASHRLNTDPTVRPVKQKKR 23
L++ H+ FAW+H DM GI SI SHRLN PT RP++Q+ R
Sbjct: 485 LRQNHDVFAWAHSDMKGIHPSITSHRLNVLPTARPIQQRVR 525