BLASTX nr result
ID: Cocculus22_contig00030213
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00030213
(414 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera] 190 2e-46
ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containi... 186 3e-45
ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containi... 185 7e-45
ref|XP_006575401.1| PREDICTED: pentatricopeptide repeat-containi... 182 3e-44
ref|XP_006417007.1| hypothetical protein EUTSA_v10009648mg [Eutr... 182 3e-44
gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical ... 177 2e-42
ref|NP_172899.1| pentatricopeptide repeat-containing protein [Ar... 177 2e-42
ref|XP_006307192.1| hypothetical protein CARUB_v10008784mg [Caps... 175 5e-42
ref|XP_002519368.1| pentatricopeptide repeat-containing protein,... 175 5e-42
ref|XP_007023780.1| Pentatricopeptide repeat superfamily protein... 172 3e-41
ref|XP_007023779.1| Pentatricopeptide repeat superfamily protein... 172 3e-41
ref|XP_007148596.1| hypothetical protein PHAVU_006G221900g [Phas... 172 4e-41
ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40
ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40
ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arab... 169 3e-40
ref|XP_007225169.1| hypothetical protein PRUPE_ppa002283mg [Prun... 166 2e-39
ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containi... 165 5e-39
ref|XP_003624026.1| Pentatricopeptide repeat-containing protein ... 159 3e-37
ref|XP_003624021.1| Pentatricopeptide repeat-containing protein ... 157 2e-36
gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula] 157 2e-36
>emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 190 bits (483), Expect = 2e-46
Identities = 91/130 (70%), Positives = 109/130 (83%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G++PDETTWVTVIS+ + RGDP LA SLV +L ++ I LNCFV+TALLDMYAKCG + A
Sbjct: 255 GIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAA 314
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
R+IF E+G + N V+WNAMISAY RVG+L SAR LFN MP +NVV+WNSMIAGYAQNG S
Sbjct: 315 RRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQS 374
Query: 52 SLAIELFKEM 23
++AIELFKEM
Sbjct: 375 AMAIELFKEM 384
Score = 85.9 bits (211), Expect = 5e-15
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 32/123 (26%)
Frame = -3
Query: 295 NCFVKTALLDMYAKCGELTTARQIFYEMGTHA---------------------------- 200
+ FV+ A++DMYA+ G + AR++F E+ +
Sbjct: 129 DAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDV 188
Query: 199 ----NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELF 32
NV++W AM++ YA+V DL +ARR F+ MPE++VVSWN+M++GYAQNG + + LF
Sbjct: 189 MPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLF 248
Query: 31 KEM 23
EM
Sbjct: 249 DEM 251
Score = 62.8 bits (151), Expect = 5e-08
Identities = 37/103 (35%), Positives = 55/103 (53%)
Frame = -3
Query: 409 LQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTAR 230
L PDE T V+VIS+ G L +V L I L+ A++ MY++CG + A+
Sbjct: 390 LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAK 449
Query: 229 QIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNV 101
++F EM T +VVS+N +IS +A G A L + M E +
Sbjct: 450 RVFQEMATR-DVVSYNTLISGFAAHGHGVEAINLMSTMKEGGI 491
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Frame = -3
Query: 391 TWVTVISSLAERGDPGLAKSLV-ESLDRRHINLNCFVKTALLDMYAKCGELTTAR----- 230
TW ++I+ A+ G +A L E + + + + + ++ + + CG L
Sbjct: 360 TWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPD---EVTMVSVISACGHLGALELGNWV 416
Query: 229 -QIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
+ E ++ NAMI Y+R G + A+R+F +M ++VVS+N++I+G+A +GH
Sbjct: 417 VRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHG 476
Query: 52 SLAIELFKEM 23
AI L M
Sbjct: 477 VEAINLMSTM 486
>ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Solanum lycopersicum]
Length = 758
Score = 186 bits (472), Expect = 3e-45
Identities = 88/127 (69%), Positives = 107/127 (84%)
Frame = -3
Query: 403 PDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQI 224
PDETTWVTVIS + GD LA+ LV+ ++ + + LNCF KTALLDMYAKCG L AR+I
Sbjct: 256 PDETTWVTVISLCSSHGDVSLAEGLVKMINEKGVRLNCFAKTALLDMYAKCGNLAMARKI 315
Query: 223 FYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLA 44
F E+GT+ N+V+WNAMISAYARVGDLASAR LF+K+PEKNV+SWNS+IAGYAQNG S +A
Sbjct: 316 FDELGTYKNLVTWNAMISAYARVGDLASARGLFDKVPEKNVISWNSIIAGYAQNGESKVA 375
Query: 43 IELFKEM 23
I+LFK+M
Sbjct: 376 IDLFKDM 382
Score = 86.7 bits (213), Expect = 3e-15
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 30/119 (25%)
Frame = -3
Query: 289 FVKTALLDMYAKCGELTTARQIFYEMGTHA------------------------------ 200
FV+ A++D+Y K G L AR++F E+ A
Sbjct: 131 FVRNAIMDVYGKFGPLEIARELFDEIPERAVADWNAMISGCWNWGDEVEARSLFDLMPEK 190
Query: 199 NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKEM 23
NVV+W AM++ Y+R DL +AR+ F++MPE++VVSWN+M++GYAQNG + I+LF EM
Sbjct: 191 NVVTWTAMVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGCAEEVIKLFNEM 249
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/101 (33%), Positives = 53/101 (52%)
Frame = -3
Query: 403 PDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQI 224
PDE T V+VIS+ G V L++ I L+ AL+ MY+KCG + A ++
Sbjct: 389 PDEVTMVSVISACGHLGALEFGNWAVNFLEKHQIKLSISGYNALIFMYSKCGNMKDAEKV 448
Query: 223 FYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNV 101
F M +V+S+N +I+ A G+ A L KM ++N+
Sbjct: 449 FQSMEAR-DVISYNTLITGVAAYGNAIEAVELLWKMKKENI 488
>ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Solanum tuberosum]
Length = 758
Score = 185 bits (469), Expect = 7e-45
Identities = 87/130 (66%), Positives = 108/130 (83%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G+ PDETTWVTVIS + GD LA+ LV+ ++ + + NCF KTALLDMYAKCG L +
Sbjct: 253 GVCPDETTWVTVISLCSSHGDASLAEGLVKMINDKGVRFNCFAKTALLDMYAKCGNLAMS 312
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
R+IF E+GT+ N+V+WNAMISAYARVGDLASARRLF+ +PEKNV+SWNS+IAGYAQNG S
Sbjct: 313 RKIFDELGTYKNLVTWNAMISAYARVGDLASARRLFDTVPEKNVISWNSIIAGYAQNGQS 372
Query: 52 SLAIELFKEM 23
+AI+LFK+M
Sbjct: 373 KVAIDLFKDM 382
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 30/119 (25%)
Frame = -3
Query: 289 FVKTALLDMYAKCGELTTARQIFYEMGTHA------------------------------ 200
FV+ A++DMY K G L AR++F E+ A
Sbjct: 131 FVRNAIMDMYGKFGPLEIARELFDEIPERAVADWNAMISGCWNWGNEVEARSLFDLMPEK 190
Query: 199 NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKEM 23
NVV+W AM++ Y+R DL +AR+ F++MPE++VVSWN+M++GYAQNG S I LF EM
Sbjct: 191 NVVTWTAMVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGCSEEVIRLFNEM 249
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/101 (33%), Positives = 55/101 (54%)
Frame = -3
Query: 403 PDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQI 224
PDE T V+VIS+ G V L++ I L+ AL+ MY+KCG + A ++
Sbjct: 389 PDEVTMVSVISACGHLGALEFGNWAVNFLEKHQIKLSISGDNALIFMYSKCGNMKDAEKV 448
Query: 223 FYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNV 101
F M + +V+S+N +I+ +A G+ A L KM ++N+
Sbjct: 449 FQSMDSR-DVISYNTLITGFAAYGNAVEAVELLWKMKKENI 488
>ref|XP_006575401.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 640
Score = 182 bits (463), Expect = 3e-44
Identities = 90/137 (65%), Positives = 108/137 (78%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G +PDETTWVTV+SS + GDP LA+S+V LDR + N FVKTALLDM+AKCG L A
Sbjct: 259 GNEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNYFVKTALLDMHAKCGNLEVA 318
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
++IF ++G + N V+WNAMISAYARVGDL+ AR LFNKMPE+N VSWNSMIAGYAQNG S
Sbjct: 319 QKIFEQLGVYKNSVTWNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAGYAQNGES 378
Query: 52 SLAIELFKEMTMTNNFK 2
AI+LFKEM + + K
Sbjct: 379 LKAIQLFKEMISSKDSK 395
Score = 79.0 bits (193), Expect = 7e-13
Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Frame = -3
Query: 379 VISSLAERGDPGLAKSLVESL-DRRHINLNCFVKTALLDMYAKCGELTTARQIFYEMG-T 206
++ A+ G LA+ L + + DR + N ++ Y KCG A ++F MG +
Sbjct: 140 IMGIYAKYGCIELARKLFDEMPDRTAADWN-----VIISGYWKCGNEKEATRLFCMMGES 194
Query: 205 HANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKE 26
NV++W M++ +A++ +L +AR F++MPE+ V SWN+M++GYAQ+G + + LF +
Sbjct: 195 EKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYAQSGAAQETVRLFDD 254
Query: 25 MTMTNN 8
M + N
Sbjct: 255 MLSSGN 260
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/102 (36%), Positives = 53/102 (51%)
Frame = -3
Query: 406 QPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQ 227
+PDE T V+V S+ G GL V L HI L+ +L+ MY +CG + AR
Sbjct: 395 KPDEVTMVSVFSACGHLGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLRCGSMEDARI 454
Query: 226 IFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNV 101
F EM T ++VS+N +IS A G + +L +KM E +
Sbjct: 455 TFQEMAT-KDLVSYNTLISGLAAHGHGTESIKLMSKMKEDGI 495
Score = 60.1 bits (144), Expect = 3e-07
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 35/165 (21%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRH-INLNCFV---------------- 284
G+ + TW +IS+ A GD LA+ L + R+ ++ N +
Sbjct: 326 GVYKNSVTWNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLF 385
Query: 283 ------------KTALLDMYAKCGEL------TTARQIFYEMGTHANVVSWNAMISAYAR 158
+ ++ +++ CG L A I +E ++ +N++I Y R
Sbjct: 386 KEMISSKDSKPDEVTMVSVFSACGHLGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLR 445
Query: 157 VGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKEM 23
G + AR F +M K++VS+N++I+G A +GH + +I+L +M
Sbjct: 446 CGSMEDARITFQEMATKDLVSYNTLISGLAAHGHGTESIKLMSKM 490
>ref|XP_006417007.1| hypothetical protein EUTSA_v10009648mg [Eutrema salsugineum]
gi|557094778|gb|ESQ35360.1| hypothetical protein
EUTSA_v10009648mg [Eutrema salsugineum]
Length = 490
Score = 182 bits (463), Expect = 3e-44
Identities = 85/137 (62%), Positives = 111/137 (81%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G++P+ETTWV VIS+ + RGDP LA SLV+ +D + + LNCF+KTALLDM+AKC ++ +A
Sbjct: 248 GVKPNETTWVIVISACSSRGDPSLAHSLVKLIDEQRVRLNCFLKTALLDMHAKCRDIVSA 307
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
R+IF E+GT N+V+WNAMIS Y R+GDL+ AR+LF+ MPEKNVVSWNSMIAG+A NG
Sbjct: 308 RRIFNELGTQRNLVTWNAMISGYTRIGDLSLARQLFDTMPEKNVVSWNSMIAGFAHNGQP 367
Query: 52 SLAIELFKEMTMTNNFK 2
+LAIE FKEM + + K
Sbjct: 368 ALAIEFFKEMIDSGDSK 384
Score = 72.4 bits (176), Expect = 6e-11
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 15/145 (10%)
Frame = -3
Query: 412 GLQPDETTWVTVISS----------LAER----GDPGLAKSLVESLDRRHINLNCFVKTA 275
G+ PD ++ VI S L E+ GDP +S + D+ + C
Sbjct: 101 GIMPDAFSFPVVIKSAGKFGVLFHALVEKLGYFGDPYSVESARKVFDQITRRM-CSDWNV 159
Query: 274 LLDMYAKCGELTTARQIFYEMGTH-ANVVSWNAMISAYARVGDLASARRLFNKMPEKNVV 98
++ Y K G+ A F M + + VSW MI+ +A++ DL SAR F++M EK+VV
Sbjct: 160 MISGYWKWGKKEEACNFFDIMPENKTDAVSWTVMITGFAKLKDLKSARWYFDQMQEKSVV 219
Query: 97 SWNSMIAGYAQNGHSSLAIELFKEM 23
+WN+M++GYAQNG + + LF +M
Sbjct: 220 TWNAMLSGYAQNGFTEETLRLFNDM 244
>gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC004044.1 and contains two domains PF|01535
of unknown function [Arabidopsis thaliana]
Length = 455
Score = 177 bits (448), Expect = 2e-42
Identities = 79/130 (60%), Positives = 109/130 (83%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G++P+ETTWV VIS+ + R DP L +SLV+ +D + + LNCFVKTALLDM+AKC ++ +A
Sbjct: 174 GVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 233
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
R+IF E+GT N+V+WNAMIS Y R+GD++SAR+LF+ MP++NVVSWNS+IAGYA NG +
Sbjct: 234 RRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQA 293
Query: 52 SLAIELFKEM 23
+LAIE F++M
Sbjct: 294 ALAIEFFEDM 303
Score = 88.2 bits (217), Expect = 1e-15
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 30/160 (18%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G+ PD ++ VI S G L ++LVE L + +V+ ++DMY K + +A
Sbjct: 16 GIMPDAFSFPVVIKSAGRFGI--LFQALVEKLG---FFKDPYVRNVIMDMYVKHESVESA 70
Query: 232 RQIF------------------------------YEMGTHANVVSWNAMISAYARVGDLA 143
R++F ++M +VVSW MI+ +A+V DL
Sbjct: 71 RKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLE 130
Query: 142 SARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKEM 23
+AR+ F++MPEK+VVSWN+M++GYAQNG + A+ LF +M
Sbjct: 131 NARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM 170
>ref|NP_172899.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806395|sp|Q9M9R6.2|PPR43_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g14470 gi|332191047|gb|AEE29168.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 540
Score = 177 bits (448), Expect = 2e-42
Identities = 79/130 (60%), Positives = 109/130 (83%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G++P+ETTWV VIS+ + R DP L +SLV+ +D + + LNCFVKTALLDM+AKC ++ +A
Sbjct: 259 GVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
R+IF E+GT N+V+WNAMIS Y R+GD++SAR+LF+ MP++NVVSWNS+IAGYA NG +
Sbjct: 319 RRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQA 378
Query: 52 SLAIELFKEM 23
+LAIE F++M
Sbjct: 379 ALAIEFFEDM 388
Score = 88.2 bits (217), Expect = 1e-15
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 30/160 (18%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G+ PD ++ VI S G L ++LVE L + +V+ ++DMY K + +A
Sbjct: 101 GIMPDAFSFPVVIKSAGRFGI--LFQALVEKLG---FFKDPYVRNVIMDMYVKHESVESA 155
Query: 232 RQIF------------------------------YEMGTHANVVSWNAMISAYARVGDLA 143
R++F ++M +VVSW MI+ +A+V DL
Sbjct: 156 RKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLE 215
Query: 142 SARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKEM 23
+AR+ F++MPEK+VVSWN+M++GYAQNG + A+ LF +M
Sbjct: 216 NARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM 255
>ref|XP_006307192.1| hypothetical protein CARUB_v10008784mg [Capsella rubella]
gi|482575903|gb|EOA40090.1| hypothetical protein
CARUB_v10008784mg [Capsella rubella]
Length = 543
Score = 175 bits (444), Expect = 5e-42
Identities = 81/130 (62%), Positives = 106/130 (81%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G++P+ETTWV VIS+ + R DP LA SLV+ + + + LNC+VKTALLDM+AKC ++ +A
Sbjct: 261 GVKPNETTWVIVISACSLRADPSLAHSLVKLIHEQRVRLNCYVKTALLDMHAKCRDILSA 320
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
R+IF E+GT N+V+WNAMIS Y R+GDL SAR+LF+ MPE+N+VSWNSMIAGYA NG
Sbjct: 321 RRIFNELGTQKNLVTWNAMISGYTRIGDLTSARQLFDIMPERNIVSWNSMIAGYAHNGQP 380
Query: 52 SLAIELFKEM 23
+LAIE F+EM
Sbjct: 381 ALAIEFFEEM 390
Score = 83.2 bits (204), Expect = 3e-14
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 33/163 (20%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G+ PD ++ VI S E G L +++VE L + +V+ ++DMY K + +A
Sbjct: 101 GILPDAWSFPVVIKSAGEFGV--LFQAIVEKLG---FFKDPYVRNVIMDMYVKHESVQSA 155
Query: 232 RQIFYEMGTH---------------------------------ANVVSWNAMISAYARVG 152
R++F ++ TH +VVSW MI+ +A++
Sbjct: 156 RKVFDQI-THRVGSDWNVMISGYWKWGNKEEACKLFDMMPENDTDVVSWTVMITGFAKLK 214
Query: 151 DLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKEM 23
DL +AR+ F+ MPEK+VVSWN+M++GYAQNG + I LF +M
Sbjct: 215 DLENARKYFDLMPEKSVVSWNAMLSGYAQNGFTEETIRLFNDM 257
Score = 70.9 bits (172), Expect = 2e-10
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 4/133 (3%)
Frame = -3
Query: 406 QPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQ 227
+PDE T ++V+S+ GD L +V+ + + I LN +L+ MYA+CG L A++
Sbjct: 397 KPDEVTMISVLSACGHMGDLELGNCIVDYISKNQIKLNVSGYRSLIFMYARCGNLWEAKR 456
Query: 226 IFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMP----EKNVVSWNSMIAGYAQNG 59
+F E +VVS+N ++SA+A GD RLF+KM E + ++ S++ + G
Sbjct: 457 VFDET-KERDVVSYNTLLSAFAANGDGVETLRLFSKMKGEGIEPDHTTYTSVLTACNRAG 515
Query: 58 HSSLAIELFKEMT 20
++F+ +T
Sbjct: 516 LLQEGQKIFESIT 528
>ref|XP_002519368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541435|gb|EEF42985.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 524
Score = 175 bits (444), Expect = 5e-42
Identities = 87/130 (66%), Positives = 103/130 (79%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G+QP+ETTW TVISS + GDP A+S V+ LD+R I +N FVKTALLDM AKCG L A
Sbjct: 182 GVQPNETTWATVISSCSSCGDPCRAESFVKLLDKRKIKMNYFVKTALLDMNAKCGNLEAA 241
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
R IF E+G N +WNAMISAY RVGDL SAR LF+KMPE++ VSWN+MI+GYAQNG S
Sbjct: 242 RGIFNELGVSRNSSTWNAMISAYTRVGDLLSARDLFDKMPERDAVSWNTMISGYAQNGQS 301
Query: 52 SLAIELFKEM 23
++AIELFKEM
Sbjct: 302 AMAIELFKEM 311
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/80 (46%), Positives = 55/80 (68%)
Frame = -3
Query: 262 YAKCGELTTARQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSM 83
Y KCG T A +F M NV++W AM++ ++++ +L SAR+ F+ MP KN+VSWN++
Sbjct: 100 YWKCGNETEACSLF-SMTPERNVITWTAMVTGFSKIKELDSARKYFDDMPVKNIVSWNAI 158
Query: 82 IAGYAQNGHSSLAIELFKEM 23
I+GYAQNG A++LF M
Sbjct: 159 ISGYAQNGFVEEALKLFNHM 178
Score = 68.9 bits (167), Expect = 7e-10
Identities = 32/93 (34%), Positives = 56/93 (60%)
Frame = -3
Query: 289 FVKTALLDMYAKCGELTTARQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPE 110
+++ +LDMYAK + AR++F EM T ++ WN+MI Y + G+ A LF+ PE
Sbjct: 60 YIRNVILDMYAKHSLIENARKLFDEM-TERSLADWNSMICGYWKCGNETEACSLFSMTPE 118
Query: 109 KNVVSWNSMIAGYAQNGHSSLAIELFKEMTMTN 11
+NV++W +M+ G+++ A + F +M + N
Sbjct: 119 RNVITWTAMVTGFSKIKELDSARKYFDDMPVKN 151
Score = 62.8 bits (151), Expect = 5e-08
Identities = 38/102 (37%), Positives = 56/102 (54%)
Frame = -3
Query: 406 QPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQ 227
QPDE T V++IS+ G L +V + I L AL+ MY+KCG + A++
Sbjct: 318 QPDEVTMVSIISACGHLGALELGTWIVNFISEYRIELTISGYNALIFMYSKCGNMKEAQR 377
Query: 226 IFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNV 101
IF EM T +VVS+N++I +A G+ A +L M E+ V
Sbjct: 378 IFQEMETR-DVVSYNSLIGGFAAHGEGNEAIKLLLSMKEEGV 418
Score = 62.4 bits (150), Expect = 6e-08
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Frame = -3
Query: 400 DETTWVTVISSLAERGDPGLAKSLV-ESLDRRHINLNCFVKTALLDMYAKCGEL------ 242
D +W T+IS A+ G +A L E +D + + + ++ + + CG L
Sbjct: 284 DAVSWNTMISGYAQNGQSAMAIELFKEMIDAKDSQPD---EVTMVSIISACGHLGALELG 340
Query: 241 TTARQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQN 62
T E + +NA+I Y++ G++ A+R+F +M ++VVS+NS+I G+A +
Sbjct: 341 TWIVNFISEYRIELTISGYNALIFMYSKCGNMKEAQRIFQEMETRDVVSYNSLIGGFAAH 400
Query: 61 GHSSLAIELFKEM 23
G + AI+L M
Sbjct: 401 GEGNEAIKLLLSM 413
>ref|XP_007023780.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
cacao] gi|590617403|ref|XP_007023781.1|
Pentatricopeptide repeat superfamily protein isoform 2
[Theobroma cacao] gi|508779146|gb|EOY26402.1|
Pentatricopeptide repeat superfamily protein isoform 2
[Theobroma cacao] gi|508779147|gb|EOY26403.1|
Pentatricopeptide repeat superfamily protein isoform 2
[Theobroma cacao]
Length = 777
Score = 172 bits (437), Expect = 3e-41
Identities = 83/137 (60%), Positives = 106/137 (77%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G++P++ TWV VISS + DP LA S+V+ LD++ I LN ++KTALLDM+AKCG L TA
Sbjct: 271 GIEPNQITWVAVISSCSSLADPCLADSVVKFLDKKKIQLNSYLKTALLDMHAKCGNLETA 330
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
++IF E G H + +WNAMISAY R G+LA AR LF+KMP +NVVSWNSMIAG+AQNG
Sbjct: 331 QKIFDEFGEHRSCTTWNAMISAYMRFGNLALARELFDKMPVRNVVSWNSMIAGFAQNGQP 390
Query: 52 SLAIELFKEMTMTNNFK 2
++AI+LFKEM T N K
Sbjct: 391 AMAIQLFKEMIATTNLK 407
Score = 79.0 bits (193), Expect = 7e-13
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 32/119 (26%)
Frame = -3
Query: 283 KTALLDMYAKCGELTTARQIFYEM------------------GTHA-------------- 200
+ AL+D YAK G + AR++F EM G A
Sbjct: 147 RNALMDSYAKFGPIEAARKLFDEMPGRMAEDWNSMISGYWKWGKEAEACCLFNLMPENKR 206
Query: 199 NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKEM 23
NVV+W AM++ A + DL +ARR F++MP +NVVSWN+M++GYA+NG + A+ LF M
Sbjct: 207 NVVTWTAMVTGSANMKDLITARRYFDRMPRRNVVSWNAMLSGYAKNGFAKEALHLFLHM 265
>ref|XP_007023779.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508779145|gb|EOY26401.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
Length = 833
Score = 172 bits (437), Expect = 3e-41
Identities = 83/137 (60%), Positives = 106/137 (77%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G++P++ TWV VISS + DP LA S+V+ LD++ I LN ++KTALLDM+AKCG L TA
Sbjct: 271 GIEPNQITWVAVISSCSSLADPCLADSVVKFLDKKKIQLNSYLKTALLDMHAKCGNLETA 330
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
++IF E G H + +WNAMISAY R G+LA AR LF+KMP +NVVSWNSMIAG+AQNG
Sbjct: 331 QKIFDEFGEHRSCTTWNAMISAYMRFGNLALARELFDKMPVRNVVSWNSMIAGFAQNGQP 390
Query: 52 SLAIELFKEMTMTNNFK 2
++AI+LFKEM T N K
Sbjct: 391 AMAIQLFKEMIATTNLK 407
Score = 79.0 bits (193), Expect = 7e-13
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 32/119 (26%)
Frame = -3
Query: 283 KTALLDMYAKCGELTTARQIFYEM------------------GTHA-------------- 200
+ AL+D YAK G + AR++F EM G A
Sbjct: 147 RNALMDSYAKFGPIEAARKLFDEMPGRMAEDWNSMISGYWKWGKEAEACCLFNLMPENKR 206
Query: 199 NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKEM 23
NVV+W AM++ A + DL +ARR F++MP +NVVSWN+M++GYA+NG + A+ LF M
Sbjct: 207 NVVTWTAMVTGSANMKDLITARRYFDRMPRRNVVSWNAMLSGYAKNGFAKEALHLFLHM 265
>ref|XP_007148596.1| hypothetical protein PHAVU_006G221900g [Phaseolus vulgaris]
gi|561021819|gb|ESW20590.1| hypothetical protein
PHAVU_006G221900g [Phaseolus vulgaris]
Length = 638
Score = 172 bits (436), Expect = 4e-41
Identities = 85/137 (62%), Positives = 106/137 (77%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G +PDETTWVTV+SS + GDP LA+S+V+ LD+ N FVKTALLDM+AKCG L A
Sbjct: 257 GNEPDETTWVTVLSSCSSLGDPSLAESIVKKLDKMSFRSNYFVKTALLDMHAKCGNLELA 316
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
++IF ++G + V+WNAMISAYARVG+L+ AR LFN MPE++ VSWNSMIAGYAQNG S
Sbjct: 317 QKIFDQLGLYKTSVTWNAMISAYARVGNLSLARDLFNTMPERDTVSWNSMIAGYAQNGES 376
Query: 52 SLAIELFKEMTMTNNFK 2
AI+LFKEM + + K
Sbjct: 377 LKAIKLFKEMMSSKDSK 393
Score = 78.6 bits (192), Expect = 9e-13
Identities = 35/90 (38%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = -3
Query: 274 LLDMYAKCGELTTARQIFYEMG-THANVVSWNAMISAYARVGDLASARRLFNKMPEKNVV 98
++ Y KCG A ++F MG + NV++W M++ +A++ +L +AR F++MPE++VV
Sbjct: 169 IISGYWKCGNEYEASRLFCTMGESKRNVITWTTMVTGHAKMRNLKAARIYFDEMPERSVV 228
Query: 97 SWNSMIAGYAQNGHSSLAIELFKEMTMTNN 8
SWN+M++GYAQ+G + + LF +M + N
Sbjct: 229 SWNAMLSGYAQSGAAQETLSLFNDMLSSGN 258
Score = 66.6 bits (161), Expect = 3e-09
Identities = 41/102 (40%), Positives = 54/102 (52%)
Frame = -3
Query: 406 QPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQ 227
+PDE T VTV S+ G GL V L HI L+ AL+ MY +CG L AR
Sbjct: 393 KPDEVTMVTVFSACGHLGRLGLGNWAVSILSENHIKLSISGYNALIFMYLRCGSLEDARI 452
Query: 226 IFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNV 101
IF +M T ++VS+N +IS A G + RL +KM E +
Sbjct: 453 IFQKMATR-DLVSYNTLISGLAAHGHGTESFRLMSKMREGGI 493
>ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 170 bits (430), Expect = 2e-40
Identities = 82/130 (63%), Positives = 102/130 (78%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G+ PD+TTWV ISS + GDP LA S++ +D++HI LN FVKTALLDM+AK G L A
Sbjct: 253 GITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIA 312
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
R IF E+G+ N V+WN MISAY RVG L+ AR LF+ MP+++VVSWNSMIAGYAQNG S
Sbjct: 313 RNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGES 372
Query: 52 SLAIELFKEM 23
+++IELFKEM
Sbjct: 373 AMSIELFKEM 382
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 30/119 (25%)
Frame = -3
Query: 289 FVKTALLDMYAKCGELTTARQIFYEMGTHA------------------------------ 200
F++ A+LDMYAK G++ AR +F +M
Sbjct: 131 FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR 190
Query: 199 NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKEM 23
N+++W +M++ YA++GDL SARR F++MPE++VVSWN+M + YAQ A+ LF +M
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQM 249
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/136 (24%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
Frame = -3
Query: 400 DETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFV----KTALLDMYAKCGELTTA 233
D +W ++I+ A+ G+ ++ L + + ++C + + + + CG +
Sbjct: 355 DVVSWNSMIAGYAQNGESAMSIELFKEM------ISCMDIQPDEVTIASVLSACGHIGAL 408
Query: 232 RQIFY------EMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGY 71
+ ++ E + +N++I Y++ G +A A R+F M ++VVS+N++I+G+
Sbjct: 409 KLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGF 468
Query: 70 AQNGHSSLAIELFKEM 23
A NGH AI+L M
Sbjct: 469 AANGHGKEAIKLVLTM 484
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/103 (33%), Positives = 58/103 (56%)
Frame = -3
Query: 409 LQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTAR 230
+QPDE T +V+S+ G L+ +++ + ++I L +L+ MY+KCG + A
Sbjct: 388 IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAH 447
Query: 229 QIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNV 101
+IF MGT +VVS+N +IS +A G A +L M E+ +
Sbjct: 448 RIFQTMGTR-DVVSFNTLISGFAANGHGKEAIKLVLTMEEEGI 489
>ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 170 bits (430), Expect = 2e-40
Identities = 82/130 (63%), Positives = 102/130 (78%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G+ PD+TTWV ISS + GDP LA S++ +D++HI LN FVKTALLDM+AK G L A
Sbjct: 253 GITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIA 312
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
R IF E+G+ N V+WN MISAY RVG L+ AR LF+ MP+++VVSWNSMIAGYAQNG S
Sbjct: 313 RNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGES 372
Query: 52 SLAIELFKEM 23
+++IELFKEM
Sbjct: 373 AMSIELFKEM 382
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 30/119 (25%)
Frame = -3
Query: 289 FVKTALLDMYAKCGELTTARQIFYEMGTHA------------------------------ 200
F++ A+LDMYAK G++ AR +F +M
Sbjct: 131 FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR 190
Query: 199 NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKEM 23
N+++W +M++ YA++GDL SARR F++MPE++VVSWN+M + YAQ A+ LF +M
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQM 249
Score = 58.9 bits (141), Expect = 7e-07
Identities = 33/136 (24%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
Frame = -3
Query: 400 DETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFV----KTALLDMYAKCGELTTA 233
D +W ++I+ A+ G+ ++ L + + ++C + + + + CG +
Sbjct: 355 DVVSWNSMIAGYAQNGESAMSIELFKEM------ISCMDIQPDEVTIASVLSACGHIGAL 408
Query: 232 RQIFY------EMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGY 71
+ ++ E + +N++I Y++ G +A A R+F M ++VVS+N++I+G+
Sbjct: 409 KLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGF 468
Query: 70 AQNGHSSLAIELFKEM 23
A NGH AI+L M
Sbjct: 469 AANGHGKEAIKLVLTM 484
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/103 (33%), Positives = 58/103 (56%)
Frame = -3
Query: 409 LQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTAR 230
+QPDE T +V+S+ G L+ +++ + ++I L +L+ MY+KCG + A
Sbjct: 388 IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAH 447
Query: 229 QIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNV 101
+IF MGT +VVS+N +IS +A G A +L M E+ +
Sbjct: 448 RIFQTMGTR-DVVSFNTLISGFAANGHGKEAIKLVLTMEEEGI 489
>ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arabidopsis lyrata subsp.
lyrata] gi|297335898|gb|EFH66315.1| hypothetical protein
ARALYDRAFT_888825 [Arabidopsis lyrata subsp. lyrata]
Length = 790
Score = 169 bits (429), Expect = 3e-40
Identities = 79/130 (60%), Positives = 106/130 (81%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G++P+ETTWV VIS+ + R DP LA SLV+ + + I LN FVKTALLDM+AKC ++ +A
Sbjct: 261 GVRPNETTWVIVISACSFRADPSLAHSLVKLIGEKRIRLNFFVKTALLDMHAKCRDILSA 320
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
R+IF E+GT N+V+WNAMIS Y R+GD++SAR+LF+ MP++NVVSWNS+IAGYA NG
Sbjct: 321 RRIFNELGTQKNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSVIAGYAHNGQP 380
Query: 52 SLAIELFKEM 23
+LAIE F++M
Sbjct: 381 ALAIEFFEDM 390
Score = 82.8 bits (203), Expect = 5e-14
Identities = 54/163 (33%), Positives = 86/163 (52%), Gaps = 33/163 (20%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G+ PD + VI S + G L ++LVE + I + +V+ ++DMYAK + +A
Sbjct: 101 GIMPDTFFFPVVIKSAGKFGV--LFQALVEKMG---IFKDPYVRNVIMDMYAKHESVESA 155
Query: 232 RQIFYEMGTHA---------------------------------NVVSWNAMISAYARVG 152
R++F ++ TH +VVSW MI+ +A++
Sbjct: 156 RKVFDQI-THRKGSDWNVMISGYWKYGNKEEACKLFDMMPEGKIDVVSWTVMITGFAKLK 214
Query: 151 DLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKEM 23
DL +ARR F+ MPEK+VVSWN+M++GY+QNG + + LF +M
Sbjct: 215 DLENARRCFDCMPEKSVVSWNAMLSGYSQNGFTEETLRLFNDM 257
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/132 (31%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Frame = -3
Query: 406 QPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQ 227
+PDE T ++V+S+ GD L +V+ + ++ I LN +L+ MYA+CG L A++
Sbjct: 397 KPDEVTMISVLSACGHMGDLELGDCIVDYIGKKQIKLNDSGYRSLIFMYARCGNLWEAKR 456
Query: 226 IFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNV----VSWNSMIAGYAQNG 59
+F EM +VVS+N + SA+A GD L +KM ++ + V++ S++ + G
Sbjct: 457 VFDEM-KERDVVSYNTLFSAFAANGDGVKTLNLLSKMKDEGIEPDRVTYTSVLTACNRAG 515
Query: 58 HSSLAIELFKEM 23
+FK +
Sbjct: 516 LLEEGQRIFKSI 527
>ref|XP_007225169.1| hypothetical protein PRUPE_ppa002283mg [Prunus persica]
gi|462422105|gb|EMJ26368.1| hypothetical protein
PRUPE_ppa002283mg [Prunus persica]
Length = 692
Score = 166 bits (421), Expect = 2e-39
Identities = 82/128 (64%), Positives = 102/128 (79%)
Frame = -3
Query: 406 QPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQ 227
QP+ETTW VIS+ + GD LA S V+ L+++ I+L+ F KTALLDMYAK G L ARQ
Sbjct: 187 QPNETTWAIVISACSSCGDCSLADSFVQKLNQKRIHLSYFAKTALLDMYAKRGSLQAARQ 246
Query: 226 IFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSL 47
+F E+G N V+WNAMISAY RVGDLASAR LF+KM E++VV+WNSMI+GYAQNG S+L
Sbjct: 247 VFDELGVSRNTVTWNAMISAYTRVGDLASARELFDKMLERDVVTWNSMISGYAQNGQSAL 306
Query: 46 AIELFKEM 23
AI+LFK+M
Sbjct: 307 AIDLFKDM 314
Score = 83.2 bits (204), Expect = 3e-14
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 30/119 (25%)
Frame = -3
Query: 289 FVKTALLDMYAKCGELTTARQIFYEM------------------GTHA------------ 200
+++ A++ +YAK G + AR +F EM G A
Sbjct: 63 YIRNAIMGLYAKYGPVENARDVFAEMHERTLADWNNMIFGYWNWGNKAEACRLFDMMPER 122
Query: 199 NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELFKEM 23
NVV+W AM++ YAR+ DL +ARR F+++PEKNVVSWN+M++ YAQN A++LF +M
Sbjct: 123 NVVTWTAMVTGYARMKDLENARRYFDEIPEKNVVSWNAMLSAYAQNRFPEEALKLFDDM 181
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Frame = -3
Query: 409 LQPDETTWVTVISSLAERGDPGLA----KSLVESLDRRHINLNCFVKTALLDMYAKCGEL 242
L+ D TW ++IS A+ G LA K ++ + D + + ++ + + CG L
Sbjct: 284 LERDVVTWNSMISGYAQNGQSALAIDLFKDMITAADDPKPD-----EVTMVSVISACGHL 338
Query: 241 TTAR------QIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMI 80
I + ++ +N++I Y++ G + A+R F +M ++VVS+N++I
Sbjct: 339 GALDIGNWVISIVRKNHIKLSISGYNSLIFLYSKCGSMDDAKRTFQEMTTRDVVSYNTLI 398
Query: 79 AGYAQNGHSSLAIELFKEM 23
AG+A +GH A++L +M
Sbjct: 399 AGFAAHGHGMEAVKLLSKM 417
>ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Fragaria vesca subsp. vesca]
Length = 764
Score = 165 bits (418), Expect = 5e-39
Identities = 78/137 (56%), Positives = 108/137 (78%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTA 233
G+QP+ETTW VIS+ + GD + S ++ L+++ ++L+ F KTA+LDMYAK G + A
Sbjct: 258 GVQPNETTWAVVISACSSCGDSSVVDSFIQKLNQKRMHLSYFGKTAMLDMYAKRGSIERA 317
Query: 232 RQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHS 53
R++F E+G + + +WNAMISAYARVGDL SAR LF+KM E++V+SWNSMI+GYAQNG S
Sbjct: 318 REVFDELGVYKSSGTWNAMISAYARVGDLTSARELFDKMLERDVISWNSMISGYAQNGQS 377
Query: 52 SLAIELFKEMTMTNNFK 2
+LAI+LFK+MT +NN K
Sbjct: 378 ALAIDLFKDMTASNNPK 394
Score = 82.4 bits (202), Expect = 6e-14
Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Frame = -3
Query: 412 GLQPDETTWVTVISSLAERGDPGLAKSLVESLDRRH-INLNCFVKTALLDMYAKCGELTT 236
GL D V+S ++ G A+ + E + R ++ N V Y K G+
Sbjct: 130 GLVSDRYVRNAVMSVYSKYGPVEHARKVFEEMPERSLVDWNNMVSG-----YWKWGDKVE 184
Query: 235 ARQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGH 56
A ++F +M +VVSW AM++ YAR+ DL +ARR F+ +PEKNVVSWN+M++ YAQNG
Sbjct: 185 ACKLF-DMMPEKDVVSWTAMVTGYARMKDLENARRCFDDVPEKNVVSWNAMLSAYAQNGC 243
Query: 55 SSLAIELFKEM 23
A+ LF +M
Sbjct: 244 PEEALRLFDDM 254
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/100 (36%), Positives = 58/100 (58%)
Frame = -3
Query: 406 QPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQ 227
+P+E T +VIS+ G + V L + HIN + V +L+ +Y+KCG + A++
Sbjct: 394 KPNEVTMASVISACGHLGALEIGNWAVNFLTKHHINPSISVYNSLISLYSKCGSMDDAKR 453
Query: 226 IFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEK 107
IF E+ + +VVS+NA+IS +A G A +L KM E+
Sbjct: 454 IFDEI-KNRDVVSYNALISGFAAHGHGMEAVKLMMKMKEE 492
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/135 (26%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Frame = -3
Query: 409 LQPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTT-- 236
L+ D +W ++IS A+ G LA L + D N + + + + CG L
Sbjct: 357 LERDVISWNSMISGYAQNGQSALAIDLFK--DMTASNNPKPNEVTMASVISACGHLGALE 414
Query: 235 ----ARQIFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYA 68
A + + ++ +N++IS Y++ G + A+R+F+++ ++VVS+N++I+G+A
Sbjct: 415 IGNWAVNFLTKHHINPSISVYNSLISLYSKCGSMDDAKRIFDEIKNRDVVSYNALISGFA 474
Query: 67 QNGHSSLAIELFKEM 23
+GH A++L +M
Sbjct: 475 AHGHGMEAVKLMMKM 489
>ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 646
Score = 159 bits (403), Expect = 3e-37
Identities = 84/139 (60%), Positives = 103/139 (74%), Gaps = 3/139 (2%)
Frame = -3
Query: 409 LQPDETTWVTVISSLAERGDPGLAKSLVESLDRR-HINLNCFVKTALLDMYAKCGELTTA 233
+QPDETTWVTVISS + GDP L++S+V LD N FVKTALLDM+AKCG L A
Sbjct: 263 VQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAA 322
Query: 232 RQIFYEMGTHA--NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNG 59
+IF ++G + + V WNAMISAYARVGDL SAR LF+KMP+++ VSWNSMIAGY QNG
Sbjct: 323 HKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNG 382
Query: 58 HSSLAIELFKEMTMTNNFK 2
S AI+LF+EM + + K
Sbjct: 383 ESVKAIKLFEEMISSEDSK 401
Score = 82.0 bits (201), Expect = 8e-14
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Frame = -3
Query: 379 VISSLAERGDPGLAKSLVESL-DRRHINLNCFVKTALLDMYAKCGELTTARQIFYEMGTH 203
++ A+ G A+ L + + DR + N ++ Y KCG A +F+ MG
Sbjct: 140 ILGIYAKYGPIEFARKLFDEMPDRTVADWN-----VMISGYWKCGNEEEASTLFHVMGDQ 194
Query: 202 A---NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELF 32
NV++W MI+ +A+ G+L +AR F+KMPE++VVSWN+M++GYAQ G I LF
Sbjct: 195 EISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLF 254
Query: 31 KEMTMTNN 8
+M N
Sbjct: 255 NDMLSPGN 262
Score = 65.9 bits (159), Expect = 6e-09
Identities = 37/102 (36%), Positives = 55/102 (53%)
Frame = -3
Query: 406 QPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQ 227
+PDE T V+V S+ G+ GL V L HI ++ V +L+ MY++CG + A
Sbjct: 401 KPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVL 460
Query: 226 IFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNV 101
IF EM T ++VS+N +IS +A G + L KM E +
Sbjct: 461 IFQEMATR-DLVSYNTLISGFAEHGHGMESIELLLKMKEDGI 501
>ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 632
Score = 157 bits (396), Expect = 2e-36
Identities = 81/132 (61%), Positives = 100/132 (75%), Gaps = 3/132 (2%)
Frame = -3
Query: 409 LQPDETTWVTVISSLAERGDPGLAKSLVESLDRR-HINLNCFVKTALLDMYAKCGELTTA 233
+QPDETTW TVISS + GDP L++S+V LD + N FVKTALLDM+AKCG L A
Sbjct: 248 VQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAA 307
Query: 232 RQIFYEMGTHA--NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNG 59
+IF ++G + + V WNAMISAYARVGDL SA+ LF+KMP+++ VSWNSMIAGY QNG
Sbjct: 308 HKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNG 367
Query: 58 HSSLAIELFKEM 23
S AI+LF+EM
Sbjct: 368 ESFKAIKLFEEM 379
Score = 82.0 bits (201), Expect = 8e-14
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Frame = -3
Query: 379 VISSLAERGDPGLAKSLVESL-DRRHINLNCFVKTALLDMYAKCGELTTARQIFYEMGTH 203
++ A+ G A+ L + + DR + N ++ Y KCG A +F+ MG
Sbjct: 125 ILGIYAKYGPIEFARKLFDEMPDRTVADWN-----VMISGYWKCGNEEEASTLFHVMGDQ 179
Query: 202 A---NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELF 32
NV++W MI+ +A+ G+L +AR F+KMPE++VVSWN+M++GYAQ G I LF
Sbjct: 180 EISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLF 239
Query: 31 KEMTMTNN 8
+M N
Sbjct: 240 NDMLSPGN 247
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/102 (36%), Positives = 57/102 (55%)
Frame = -3
Query: 406 QPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQ 227
+PDE T V+V S+ G+ GL V L HI ++ V +L++MY++CG + A
Sbjct: 387 KPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVL 446
Query: 226 IFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNV 101
IF EM T ++VS+N +IS +A G + L +KM E +
Sbjct: 447 IFQEMATR-DLVSYNTLISGFAEHGHGMESIELLSKMKEDGI 487
>gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 157 bits (396), Expect = 2e-36
Identities = 81/132 (61%), Positives = 100/132 (75%), Gaps = 3/132 (2%)
Frame = -3
Query: 409 LQPDETTWVTVISSLAERGDPGLAKSLVESLDRR-HINLNCFVKTALLDMYAKCGELTTA 233
+QPDETTW TVISS + GDP L++S+V LD + N FVKTALLDM+AKCG L A
Sbjct: 191 VQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAA 250
Query: 232 RQIFYEMGTHA--NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNG 59
+IF ++G + + V WNAMISAYARVGDL SA+ LF+KMP+++ VSWNSMIAGY QNG
Sbjct: 251 HKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNG 310
Query: 58 HSSLAIELFKEM 23
S AI+LF+EM
Sbjct: 311 ESFKAIKLFEEM 322
Score = 82.0 bits (201), Expect = 8e-14
Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Frame = -3
Query: 379 VISSLAERGDPGLAKSLVESL-DRRHINLNCFVKTALLDMYAKCGELTTARQIFYEMGTH 203
++ A+ G A+ L + + DR + N ++ Y KCG A +F+ MG
Sbjct: 68 ILGIYAKYGPIEFARKLFDEMPDRTVADWN-----VMISGYWKCGNEEEASTLFHVMGDQ 122
Query: 202 A---NVVSWNAMISAYARVGDLASARRLFNKMPEKNVVSWNSMIAGYAQNGHSSLAIELF 32
NV++W MI+ +A+ G+L +AR F+KMPE++VVSWN+M++GYAQ G I LF
Sbjct: 123 EISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLF 182
Query: 31 KEMTMTNN 8
+M N
Sbjct: 183 NDMLSPGN 190
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/102 (36%), Positives = 57/102 (55%)
Frame = -3
Query: 406 QPDETTWVTVISSLAERGDPGLAKSLVESLDRRHINLNCFVKTALLDMYAKCGELTTARQ 227
+PDE T V+V S+ G+ GL V L HI ++ V +L++MY++CG + A
Sbjct: 330 KPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVL 389
Query: 226 IFYEMGTHANVVSWNAMISAYARVGDLASARRLFNKMPEKNV 101
IF EM T ++VS+N +IS +A G + L +KM E +
Sbjct: 390 IFQEMATR-DLVSYNTLISGFAEHGHGMESIELLSKMKEDGI 430