BLASTX nr result
ID: Cocculus22_contig00030127
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00030127
(294 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containi... 67 6e-19
emb|CAN82148.1| hypothetical protein VITISV_043500 [Vitis vinifera] 67 6e-19
ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 67 2e-16
ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-16
ref|XP_002885776.1| pentatricopeptide repeat-containing protein ... 56 2e-14
emb|CBI19521.3| unnamed protein product [Vitis vinifera] 52 2e-14
gb|EXC19764.1| hypothetical protein L484_006339 [Morus notabilis] 63 3e-14
ref|XP_006299811.1| hypothetical protein CARUB_v10016012mg, part... 54 2e-13
ref|NP_178563.2| pentatricopeptide repeat-containing protein [Ar... 55 5e-13
gb|ABK28484.1| unknown [Arabidopsis thaliana] 55 5e-13
gb|AAD22320.1| hypothetical protein [Arabidopsis thaliana] gi|91... 55 5e-13
ref|XP_006418543.1| hypothetical protein EUTSA_v10002423mg [Eutr... 52 8e-13
gb|ABC47857.1| PPR-repeat containing protein [Glycine max] 51 4e-12
ref|XP_002510219.1| pentatricopeptide repeat-containing protein,... 72 1e-10
ref|XP_007017243.1| Tetratricopeptide repeat (TPR)-like superfam... 67 2e-09
ref|XP_007225449.1| hypothetical protein PRUPE_ppa000328mg [Prun... 54 3e-09
gb|EPS57776.1| hypothetical protein M569_17040, partial [Genlise... 56 7e-09
ref|XP_004292817.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_004493626.1| PREDICTED: pentatricopeptide repeat-containi... 50 3e-08
ref|XP_007224413.1| hypothetical protein PRUPE_ppa021206mg [Prun... 54 5e-08
>ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 67.4 bits (163), Expect(2) = 6e-19
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = -1
Query: 291 AARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
AA +LFEE F K+ VSWNTMIGAYG N DEA+L+FK+M E VE N VTI+
Sbjct: 207 AAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTII 259
Score = 52.4 bits (124), Expect(2) = 6e-19
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = -2
Query: 134 CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFNQ 3
C N+E A LLY MPQ++LVSLTA+IS YAEKG++ + F Q
Sbjct: 297 CGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQ 340
>emb|CAN82148.1| hypothetical protein VITISV_043500 [Vitis vinifera]
Length = 662
Score = 67.4 bits (163), Expect(2) = 6e-19
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = -1
Query: 291 AARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
AA +LFEE F K+ VSWNTMIGAYG N DEA+L+FK+M E VE N VTI+
Sbjct: 214 AAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTII 266
Score = 52.4 bits (124), Expect(2) = 6e-19
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = -2
Query: 134 CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFNQ 3
C N+E A LLY MPQ++LVSLTA+IS YAEKG++ + F Q
Sbjct: 304 CGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQ 347
>ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g04860-like [Cucumis sativus]
Length = 704
Score = 66.6 bits (161), Expect(2) = 2e-16
Identities = 34/54 (62%), Positives = 40/54 (74%)
Frame = -1
Query: 294 DAARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
D +LLF E KSVVSWNTMIGA+G N EA+L+FK+ML E V ANSVT+V
Sbjct: 216 DGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMV 269
Score = 44.3 bits (103), Expect(2) = 2e-16
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = -2
Query: 134 CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDI 30
C +E+A L+Y S +K+LV+LTAIIS YAEKGD+
Sbjct: 307 CGYIELAELIYMSKLKKNLVALTAIISHYAEKGDM 341
>ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Cucumis sativus]
Length = 704
Score = 66.6 bits (161), Expect(2) = 2e-16
Identities = 34/54 (62%), Positives = 40/54 (74%)
Frame = -1
Query: 294 DAARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
D +LLF E KSVVSWNTMIGA+G N EA+L+FK+ML E V ANSVT+V
Sbjct: 216 DGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMV 269
Score = 44.3 bits (103), Expect(2) = 2e-16
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = -2
Query: 134 CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDI 30
C +E+A L+Y S +K+LV+LTAIIS YAEKGD+
Sbjct: 307 CGYIELAELIYMSKLKKNLVALTAIISHYAEKGDM 341
>ref|XP_002885776.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331616|gb|EFH62035.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 582
Score = 56.2 bits (134), Expect(2) = 2e-14
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = -1
Query: 294 DAARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
D+A +LF E +KS VSWNTMIGAY + +EA+ +FK M + VE + VTI+
Sbjct: 93 DSAEVLFREMKDKSTVSWNTMIGAYSQSGLMEEAITVFKNMFEKSVEISPVTII 146
Score = 48.5 bits (114), Expect(2) = 2e-14
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = -2
Query: 134 CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFNQ 3
C L+ A LY S Q S+V LT+I+SSYAEKGD+ A+ YF++
Sbjct: 184 CGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSK 227
>emb|CBI19521.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 52.4 bits (124), Expect(2) = 2e-14
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = -2
Query: 134 CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFNQ 3
C N+E A LLY MPQ++LVSLTA+IS YAEKG++ + F Q
Sbjct: 352 CGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQ 395
Score = 52.0 bits (123), Expect(2) = 2e-14
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = -1
Query: 246 SWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
SWNTMIGAYG N DEA+L+FK+M E VE N VTI+
Sbjct: 308 SWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTII 345
>gb|EXC19764.1| hypothetical protein L484_006339 [Morus notabilis]
Length = 715
Score = 62.8 bits (151), Expect(2) = 3e-14
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = -1
Query: 291 AARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
AA LFEE KSVVSWNTMIGA+G N + +A+L+FK+M +VEAN VT+V
Sbjct: 208 AAECLFEEIVGKSVVSWNTMIGAFGQNGFFGKAMLVFKQMRKGNVEANPVTMV 260
Score = 41.2 bits (95), Expect(2) = 3e-14
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = -2
Query: 128 NLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYF 9
N + A LY S PQK+LV++TAII S+ EKG++ AM F
Sbjct: 300 NSKSAERLYMSFPQKNLVAVTAIIQSHTEKGNMLSAMECF 339
>ref|XP_006299811.1| hypothetical protein CARUB_v10016012mg, partial [Capsella rubella]
gi|482568520|gb|EOA32709.1| hypothetical protein
CARUB_v10016012mg, partial [Capsella rubella]
Length = 700
Score = 54.3 bits (129), Expect(2) = 2e-13
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = -1
Query: 294 DAARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
++A +LF + +KS VSWNTMIGAY + D+A+ +FK M+ ++VE + VTI+
Sbjct: 211 ESAEVLFRDMRDKSTVSWNTMIGAYSQSGLQDKAISVFKNMVEKNVEISPVTII 264
Score = 47.0 bits (110), Expect(2) = 2e-13
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = -2
Query: 134 CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFNQ 3
C + + A LY S Q S+V LT+I+SSYAEKGD+ A+ YF++
Sbjct: 302 CWDSDSAECLYASANQDSIVGLTSIVSSYAEKGDMDRAVVYFSK 345
>ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g04860 gi|330250783|gb|AEC05877.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 692
Score = 54.7 bits (130), Expect(2) = 5e-13
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = -1
Query: 291 AARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
+A +LF E +KS VSWNTMIGAY + +EA+ +FK M ++VE + VTI+
Sbjct: 204 SAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTII 256
Score = 45.1 bits (105), Expect(2) = 5e-13
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -2
Query: 134 CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFNQ 3
C L A LY S Q S+V LT+I+S YAEKGD+ A+ YF++
Sbjct: 294 CGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSK 337
>gb|ABK28484.1| unknown [Arabidopsis thaliana]
Length = 583
Score = 54.7 bits (130), Expect(2) = 5e-13
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = -1
Query: 291 AARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
+A +LF E +KS VSWNTMIGAY + +EA+ +FK M ++VE + VTI+
Sbjct: 94 SAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTII 146
Score = 45.1 bits (105), Expect(2) = 5e-13
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -2
Query: 134 CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFNQ 3
C L A LY S Q S+V LT+I+S YAEKGD+ A+ YF++
Sbjct: 184 CGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSK 227
>gb|AAD22320.1| hypothetical protein [Arabidopsis thaliana]
gi|91806147|gb|ABE65802.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 582
Score = 54.7 bits (130), Expect(2) = 5e-13
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = -1
Query: 291 AARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
+A +LF E +KS VSWNTMIGAY + +EA+ +FK M ++VE + VTI+
Sbjct: 94 SAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTII 146
Score = 45.1 bits (105), Expect(2) = 5e-13
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -2
Query: 134 CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFNQ 3
C L A LY S Q S+V LT+I+S YAEKGD+ A+ YF++
Sbjct: 184 CGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSK 227
>ref|XP_006418543.1| hypothetical protein EUTSA_v10002423mg [Eutrema salsugineum]
gi|557096471|gb|ESQ36979.1| hypothetical protein
EUTSA_v10002423mg [Eutrema salsugineum]
Length = 690
Score = 51.6 bits (122), Expect(2) = 8e-13
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = -1
Query: 294 DAARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
D+A +LF E ++S VSWNTMIGAY + +EA +F+ M + VE + VT++
Sbjct: 200 DSAEVLFTEMEDRSTVSWNTMIGAYSQSALQEEAFAVFRDMFEKRVEISPVTVI 253
Score = 47.4 bits (111), Expect(2) = 8e-13
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = -2
Query: 134 CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFNQ 3
C L+ A LY S Q S+V LT+I+SSYAEKGDI + YF++
Sbjct: 291 CGYLDSAERLYASGAQDSIVGLTSIVSSYAEKGDIDVVVAYFSK 334
>gb|ABC47857.1| PPR-repeat containing protein [Glycine max]
Length = 611
Score = 50.8 bits (120), Expect(2) = 4e-12
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -1
Query: 258 KSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
K+V+SWNTMIGAYG N + D+A+L FK ML E + + VT++
Sbjct: 185 KNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGLLPSPVTMM 226
Score = 45.8 bits (107), Expect(2) = 4e-12
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = -2
Query: 122 EMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFNQ 3
+MA+L+YE P K L+SLT IISSY+EKG++ + F Q
Sbjct: 258 DMAKLIYEYYPTKDLISLTGIISSYSEKGEVESVVQGFIQ 297
>ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550920|gb|EEF52406.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1113
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = -1
Query: 294 DAARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
+AA LFEE +KSVVSWNTMIGAYG N + DEA+ +FKRM+G VE + VTI+
Sbjct: 595 EAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIM 648
>ref|XP_007017243.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508722571|gb|EOY14468.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 717
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/53 (60%), Positives = 41/53 (77%)
Frame = -1
Query: 291 AARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
AA +LFEE KSVV+WNTMIGAYG N DEA+++FK+M +EANSVT++
Sbjct: 200 AAEILFEEMVEKSVVAWNTMIGAYGQNGLFDEAMVLFKKMRENTLEANSVTVM 252
>ref|XP_007225449.1| hypothetical protein PRUPE_ppa000328mg [Prunus persica]
gi|462422385|gb|EMJ26648.1| hypothetical protein
PRUPE_ppa000328mg [Prunus persica]
Length = 1279
Score = 53.5 bits (127), Expect(2) = 3e-09
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = -2
Query: 131 RNLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYF 9
RN E +LLY+S+PQK+LVSLTA++SSY EKGD+ M F
Sbjct: 208 RNTESGKLLYKSLPQKNLVSLTALMSSYTEKGDLFQVMSCF 248
Score = 33.5 bits (75), Expect(2) = 3e-09
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 288 ARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
A LF++ ++ VVSWN +I + N EAL +F +M E + T+V
Sbjct: 116 AHRLFDDMPDRDVVSWNALICGFSRNGCDFEALKLFVQMCKEGFFPHQTTLV 167
>gb|EPS57776.1| hypothetical protein M569_17040, partial [Genlisea aurea]
Length = 770
Score = 56.2 bits (134), Expect(2) = 7e-09
Identities = 29/58 (50%), Positives = 40/58 (68%)
Frame = -1
Query: 294 DAARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV*ELR 121
+AARL+F+E ++SVVSWN+MI Y YS+EAL +F++M E VE VT + LR
Sbjct: 263 EAARLMFDEISSRSVVSWNSMIDGYAQCGYSEEALDLFRKMRDEGVEPTDVTFMGVLR 320
Score = 29.3 bits (64), Expect(2) = 7e-09
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -2
Query: 134 CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFNQ 3
CR +++A L+ + +K+LVS +I +A+ G A+ F +
Sbjct: 360 CRRVDIAAELFGKLKEKTLVSWNTMILGHAQNGSAVEALRLFRR 403
>ref|XP_004292817.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Fragaria vesca subsp. vesca]
Length = 706
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = -1
Query: 294 DAARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
+AA +LFEE K V SWNTMIGAYG N DEA+L+F+RM E V+AN VT+V
Sbjct: 210 EAAEVLFEEIVYKGVDSWNTMIGAYGQNGCFDEAMLVFRRMREESVQANVVTMV 263
>ref|XP_004493626.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cicer arietinum]
Length = 666
Score = 50.1 bits (118), Expect(2) = 3e-08
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = -1
Query: 288 ARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
AR +F+E+ +K VV+W TMI Y S EA+ +FK ML DVE N VT++
Sbjct: 201 AREVFDESSDKDVVTWTTMIDGYAAQKCSHEAMEVFKLMLLGDVEPNEVTLI 252
Score = 33.5 bits (75), Expect(2) = 3e-08
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = -2
Query: 152 LIQLL*CRNLEMARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFNQ 3
L+ + C +L AR L++ + + + S T +++ YA+ GD+ A +F+Q
Sbjct: 290 LVMYVKCGHLIAARELFDRVETRDVYSWTCMVNGYAKCGDLESARRFFDQ 339
>ref|XP_007224413.1| hypothetical protein PRUPE_ppa021206mg [Prunus persica]
gi|462421349|gb|EMJ25612.1| hypothetical protein
PRUPE_ppa021206mg [Prunus persica]
Length = 597
Score = 53.5 bits (127), Expect(2) = 5e-08
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = -1
Query: 288 ARLLFEENFNKSVVSWNTMIGAYGLNYYSDEALLMFKRMLGEDVEANSVTIV 133
AR +F+E F + VV+W TMI Y SDEA+ +F ML DVE N VTI+
Sbjct: 171 ARKVFDETFVRDVVTWTTMIDGYATRTCSDEAMKLFGSMLVSDVEPNEVTII 222
Score = 29.3 bits (64), Expect(2) = 5e-08
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = -2
Query: 116 ARLLYESMPQKSLVSLTAIISSYAEKGDISYAMYYFN 6
A+ +++M + + S T++++ YA+ GD++ A +FN
Sbjct: 236 AKETFDNMKVRDVFSWTSMVNGYAKLGDLNSARKFFN 272