BLASTX nr result
ID: Cocculus22_contig00029972
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00029972
(437 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi... 135 6e-30
ref|XP_007041899.1| Pentatricopeptide repeat (PPR-like) superfam... 132 7e-29
ref|XP_007201591.1| hypothetical protein PRUPE_ppa020837mg [Prun... 132 7e-29
ref|XP_004288346.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
ref|XP_002528283.1| pentatricopeptide repeat-containing protein,... 118 1e-24
gb|EXB39277.1| hypothetical protein L484_024972 [Morus notabilis] 115 6e-24
ref|XP_006404547.1| hypothetical protein EUTSA_v10000418mg [Eutr... 112 5e-23
ref|XP_006296137.1| hypothetical protein CARUB_v10025289mg [Caps... 110 2e-22
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi... 110 3e-22
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi... 110 3e-22
ref|XP_002880355.1| pentatricopeptide repeat-containing protein ... 107 1e-21
ref|NP_179705.1| pentatricopeptide repeat-containing protein [Ar... 107 1e-21
ref|XP_006479937.1| PREDICTED: pentatricopeptide repeat-containi... 101 9e-20
ref|XP_006479936.1| PREDICTED: pentatricopeptide repeat-containi... 101 9e-20
ref|XP_007015858.1| Tetratricopeptide repeat (TPR)-like superfam... 101 9e-20
ref|XP_006349117.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_004251045.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
gb|AAM15176.1| putative selenium-binding protein [Arabidopsis th... 100 4e-19
ref|NP_180329.1| pentatricopeptide repeat-containing protein [Ar... 100 4e-19
ref|XP_006409754.1| hypothetical protein EUTSA_v10017649mg [Eutr... 99 6e-19
>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 135 bits (340), Expect = 6e-30
Identities = 66/94 (70%), Positives = 82/94 (87%), Gaps = 1/94 (1%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
KAAE LIELEPQSS AYVLLS+IYA +G WESV+K+R LMN+RQV+KE+AISW+E+E ++
Sbjct: 515 KAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKV 574
Query: 183 HSFTVFDQSHPVKDEIYLVVEHLAGQM-EDESLF 281
HSF+V D SHP+K++IY V+E LAGQM ED SLF
Sbjct: 575 HSFSVSDSSHPLKEQIYSVLEQLAGQMEEDASLF 608
>ref|XP_007041899.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508705834|gb|EOX97730.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 610
Score = 132 bits (331), Expect = 7e-29
Identities = 64/94 (68%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
KAAE LIELEPQSSAAYVLLS+IY ++G WE VEK+RHLMNKRQVRKE A+SW+E+E ++
Sbjct: 511 KAAEQLIELEPQSSAAYVLLSSIYGALGKWELVEKVRHLMNKRQVRKEVALSWIELENKV 570
Query: 183 HSFTVFDQSHPVKDEIYLVVEHLAGQM-EDESLF 281
H+FTV D HP+K IY +++ LAGQ+ ED SLF
Sbjct: 571 HTFTVSDTLHPLKGAIYSILDQLAGQLDEDASLF 604
>ref|XP_007201591.1| hypothetical protein PRUPE_ppa020837mg [Prunus persica]
gi|462396991|gb|EMJ02790.1| hypothetical protein
PRUPE_ppa020837mg [Prunus persica]
Length = 610
Score = 132 bits (331), Expect = 7e-29
Identities = 62/91 (68%), Positives = 79/91 (86%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
K AEHLIELEPQSSAAYVLLS+IYA G WE VEK+R LM++R VRKE+A+SW+EVE R+
Sbjct: 513 KVAEHLIELEPQSSAAYVLLSSIYAEHGKWELVEKVRQLMDERHVRKERALSWIEVENRV 572
Query: 183 HSFTVFDQSHPVKDEIYLVVEHLAGQMEDES 275
++FTV D+ HP+K+EIY V+E LAGQME+++
Sbjct: 573 NAFTVSDRLHPLKEEIYSVLEQLAGQMEEDA 603
>ref|XP_004288346.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Fragaria vesca subsp. vesca]
Length = 614
Score = 127 bits (318), Expect = 2e-27
Identities = 61/94 (64%), Positives = 77/94 (81%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
K AEHL+ELEPQSSA YVLLS+IYA G WE VEK+R LM++R VRKE+AISW+EV RL
Sbjct: 517 KVAEHLLELEPQSSAPYVLLSSIYAEEGRWELVEKVRRLMDERHVRKERAISWLEVGSRL 576
Query: 183 HSFTVFDQSHPVKDEIYLVVEHLAGQMEDESLFT 284
H+FTV D+ HP+K+EIY V++ LA QME+++ T
Sbjct: 577 HAFTVSDRLHPLKEEIYSVLKQLADQMEEDASLT 610
>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 602
Score = 118 bits (295), Expect = 1e-24
Identities = 53/89 (59%), Positives = 74/89 (83%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
+ AE +IEL+PQSSAAYVLLS+I+A++G WE VE +R LMN+R VRK++AISW+E+E ++
Sbjct: 506 EVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQLMNERHVRKDRAISWIEIENKV 565
Query: 183 HSFTVFDQSHPVKDEIYLVVEHLAGQMED 269
HSFT D+ HP+K+ IYL ++ LAG ME+
Sbjct: 566 HSFTASDRLHPLKEVIYLALKQLAGHMEE 594
>gb|EXB39277.1| hypothetical protein L484_024972 [Morus notabilis]
Length = 637
Score = 115 bits (288), Expect = 6e-24
Identities = 53/93 (56%), Positives = 72/93 (77%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
KAAEHLIEL PQS AYV LS+IYA +G WE V K+R LMN+R V+KE+A+SW+E++ ++
Sbjct: 538 KAAEHLIELNPQSPDAYVFLSSIYAVLGRWELVRKVRQLMNRRHVKKERAVSWIEIDNKV 597
Query: 183 HSFTVFDQSHPVKDEIYLVVEHLAGQMEDESLF 281
++F D+ HP+K+ IY V+E LAGQME + F
Sbjct: 598 YTFMASDKLHPMKEVIYSVLEELAGQMEVDVSF 630
>ref|XP_006404547.1| hypothetical protein EUTSA_v10000418mg [Eutrema salsugineum]
gi|557105675|gb|ESQ46000.1| hypothetical protein
EUTSA_v10000418mg [Eutrema salsugineum]
Length = 596
Score = 112 bits (280), Expect = 5e-23
Identities = 52/91 (57%), Positives = 73/91 (80%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
+AAE LI+L+P+SSA Y+LLS+IYA G+WESVEK+R +M R+V KEKA+SW+E+EK++
Sbjct: 503 RAAEELIKLDPESSAPYILLSSIYADHGNWESVEKLRGVMKMRRVNKEKALSWIEIEKKI 562
Query: 183 HSFTVFDQSHPVKDEIYLVVEHLAGQMEDES 275
+F V D SH K+EIY V+ +LA ME+E+
Sbjct: 563 ETFAVSDGSHQRKEEIYSVLHNLAALMEEEA 593
>ref|XP_006296137.1| hypothetical protein CARUB_v10025289mg [Capsella rubella]
gi|482564845|gb|EOA29035.1| hypothetical protein
CARUB_v10025289mg [Capsella rubella]
Length = 597
Score = 110 bits (275), Expect = 2e-22
Identities = 52/93 (55%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
KAAE L++L+P+SSA Y+LLS IYA G WESVEK+R +M KR+V KEKA+SW+E+EK++
Sbjct: 502 KAAEELLKLDPESSAPYILLSGIYADHGKWESVEKLRGIMKKRRVNKEKAVSWIEIEKKV 561
Query: 183 HSFTVFDQS--HPVKDEIYLVVEHLAGQMEDES 275
+FTV D S H K+EIY ++ +L ME+E+
Sbjct: 562 EAFTVSDGSHAHARKEEIYFILHNLVALMEEEA 594
>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 110 bits (274), Expect = 3e-22
Identities = 50/92 (54%), Positives = 72/92 (78%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
K AE +IEL+PQSSAAYV L+++YA +G WESVEK+R LM+++ +RKE+ ISW++V +
Sbjct: 518 KVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKT 577
Query: 183 HSFTVFDQSHPVKDEIYLVVEHLAGQMEDESL 278
HSF D+ HP+K+EIYL++E LA E++ L
Sbjct: 578 HSFIASDRLHPLKEEIYLLLEQLARHTEEDFL 609
>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 110 bits (274), Expect = 3e-22
Identities = 50/92 (54%), Positives = 72/92 (78%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
K AE +IEL+PQSSAAYV L+++YA +G WESVEK+R LM+++ +RKE+ ISW++V +
Sbjct: 518 KVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKT 577
Query: 183 HSFTVFDQSHPVKDEIYLVVEHLAGQMEDESL 278
HSF D+ HP+K+EIYL++E LA E++ L
Sbjct: 578 HSFIASDRLHPLKEEIYLLLEQLARHTEEDFL 609
>ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297326194|gb|EFH56614.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 599
Score = 107 bits (268), Expect = 1e-21
Identities = 52/95 (54%), Positives = 72/95 (75%), Gaps = 4/95 (4%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
KAAE LI+L+P+SSA Y+LLS+IYA G WE VEK+R +M KR+V KEKA+SW+E+E ++
Sbjct: 502 KAAEELIKLDPESSAPYILLSSIYADHGKWELVEKLRGIMKKRRVNKEKAVSWIEIENKV 561
Query: 183 HSFTVFDQS----HPVKDEIYLVVEHLAGQMEDES 275
+FTV D S H K+EIY ++ +LA ME+E+
Sbjct: 562 KAFTVSDGSHAHAHARKEEIYFILHNLAALMEEEA 596
>ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g21090 gi|4803934|gb|AAD29807.1| unknown protein
[Arabidopsis thaliana] gi|330252028|gb|AEC07122.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 597
Score = 107 bits (268), Expect = 1e-21
Identities = 51/93 (54%), Positives = 73/93 (78%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
KAA+ LI+L+P+SSA Y+LLS+IYA G WE VEK+R +M KR+V KEKA+SW+E+EK++
Sbjct: 502 KAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKV 561
Query: 183 HSFTVFDQS--HPVKDEIYLVVEHLAGQMEDES 275
+FTV D S H K+EIY ++ +LA +E+E+
Sbjct: 562 EAFTVSDGSHAHARKEEIYFILHNLAAVIEEEA 594
>ref|XP_006479937.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like isoform X2 [Citrus sinensis]
Length = 578
Score = 101 bits (252), Expect = 9e-20
Identities = 45/91 (49%), Positives = 70/91 (76%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
K + LI+ PQSSA + LLS+IY+++G VEK+R L+N+RQ +KE+AISW+E+E ++
Sbjct: 481 KVVDQLIDQNPQSSATHGLLSSIYSALGKGRLVEKVRQLINERQFKKEQAISWIEIENKV 540
Query: 183 HSFTVFDQSHPVKDEIYLVVEHLAGQMEDES 275
H+F+V D HP++D +Y V+E LAGQM +++
Sbjct: 541 HAFSVSDSLHPMRDVLYSVLEQLAGQMGEDA 571
>ref|XP_006479936.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like isoform X1 [Citrus sinensis]
Length = 605
Score = 101 bits (252), Expect = 9e-20
Identities = 45/91 (49%), Positives = 70/91 (76%)
Frame = +3
Query: 3 KAAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRL 182
K + LI+ PQSSA + LLS+IY+++G VEK+R L+N+RQ +KE+AISW+E+E ++
Sbjct: 508 KVVDQLIDQNPQSSATHGLLSSIYSALGKGRLVEKVRQLINERQFKKEQAISWIEIENKV 567
Query: 183 HSFTVFDQSHPVKDEIYLVVEHLAGQMEDES 275
H+F+V D HP++D +Y V+E LAGQM +++
Sbjct: 568 HAFSVSDSLHPMRDVLYSVLEQLAGQMGEDA 598
>ref|XP_007015858.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508786221|gb|EOY33477.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 875
Score = 101 bits (252), Expect = 9e-20
Identities = 48/88 (54%), Positives = 63/88 (71%)
Frame = +3
Query: 6 AAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLH 185
AAE LI L+PQ SAAYVLLSNIYA+ G+W+ K+R LM KR+VRKE SW+EV+ + H
Sbjct: 694 AAEQLISLQPQDSAAYVLLSNIYAATGNWQERTKVRKLMEKRKVRKEPGYSWIEVKNKTH 753
Query: 186 SFTVFDQSHPVKDEIYLVVEHLAGQMED 269
SF D SHP+ D IY ++ L +++D
Sbjct: 754 SFLAGDLSHPMSDHIYSKLDELKTRLKD 781
>ref|XP_006349117.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Solanum tuberosum]
Length = 871
Score = 100 bits (249), Expect = 2e-19
Identities = 46/88 (52%), Positives = 65/88 (73%)
Frame = +3
Query: 6 AAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLH 185
AAE+LI L+PQ SAAYVLLSN+YA+ G W+ K+R LM+ R+V+KE SW+EV+ + +
Sbjct: 690 AAENLISLQPQDSAAYVLLSNLYAATGDWQERAKVRKLMDVRKVKKEIGYSWIEVKNKTY 749
Query: 186 SFTVFDQSHPVKDEIYLVVEHLAGQMED 269
SF D SHP+ D IY+ +E L G+++D
Sbjct: 750 SFMAGDASHPLSDSIYMKLEELRGRLKD 777
>ref|XP_004251045.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Solanum lycopersicum]
Length = 871
Score = 100 bits (248), Expect = 3e-19
Identities = 46/88 (52%), Positives = 65/88 (73%)
Frame = +3
Query: 6 AAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLH 185
AAE+LI L+PQ SAAYVLLSN+YA+ G W+ K+R LM+ R+V+KE SW+EV+ + +
Sbjct: 690 AAENLISLQPQDSAAYVLLSNLYAATGDWQERAKVRKLMDVRKVKKEIGYSWIEVKNKTY 749
Query: 186 SFTVFDQSHPVKDEIYLVVEHLAGQMED 269
SF D SHP+ D IY+ +E L G+++D
Sbjct: 750 SFMAGDVSHPLSDSIYMKLEELRGRLKD 777
>gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 99.8 bits (247), Expect = 4e-19
Identities = 44/88 (50%), Positives = 66/88 (75%)
Frame = +3
Query: 6 AAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLH 185
AAE +I ++P+ SAAYVLLSN+YA G W+ K+R LMN+R V+KE SW+EV+ + +
Sbjct: 290 AAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTY 349
Query: 186 SFTVFDQSHPVKDEIYLVVEHLAGQMED 269
SF D+SHP+KD+IY+ +E L+ +++D
Sbjct: 350 SFLAGDRSHPLKDQIYMKLEDLSTRLKD 377
>ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g27610 gi|3860271|gb|AAC73039.1| putative
selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 99.8 bits (247), Expect = 4e-19
Identities = 44/88 (50%), Positives = 66/88 (75%)
Frame = +3
Query: 6 AAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLH 185
AAE +I ++P+ SAAYVLLSN+YA G W+ K+R LMN+R V+KE SW+EV+ + +
Sbjct: 686 AAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTY 745
Query: 186 SFTVFDQSHPVKDEIYLVVEHLAGQMED 269
SF D+SHP+KD+IY+ +E L+ +++D
Sbjct: 746 SFLAGDRSHPLKDQIYMKLEDLSTRLKD 773
>ref|XP_006409754.1| hypothetical protein EUTSA_v10017649mg [Eutrema salsugineum]
gi|557110923|gb|ESQ51207.1| hypothetical protein
EUTSA_v10017649mg [Eutrema salsugineum]
Length = 861
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/88 (48%), Positives = 67/88 (76%)
Frame = +3
Query: 6 AAEHLIELEPQSSAAYVLLSNIYASMGSWESVEKMRHLMNKRQVRKEKAISWVEVEKRLH 185
AAE +IE++P+ SAAYVLLSN+YA G W+ K+R LM++R V+KE SW+EV+ + +
Sbjct: 679 AAEKIIEMKPEDSAAYVLLSNMYAESGDWQKRAKVRKLMDERNVKKEAGYSWIEVKNKTY 738
Query: 186 SFTVFDQSHPVKDEIYLVVEHLAGQMED 269
+F D+SHP+KD+IY+ +E L+ +++D
Sbjct: 739 AFLAGDRSHPLKDQIYMKLEDLSTRLKD 766