BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00029947
         (541 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16226.3| unnamed protein product [Vitis vinifera]              338   7e-91
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   338   7e-91
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   334   9e-90
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   332   3e-89
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   332   3e-89
gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus...   326   2e-87
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...   325   3e-87
ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   325   6e-87
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   325   6e-87
gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus...   324   7e-87
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...   324   7e-87
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s...   324   7e-87
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s...   323   1e-86
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...   321   6e-86
ref|XP_003606553.1| DNA-directed RNA polymerase [Medicago trunca...   319   2e-85
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family...   319   3e-85
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...   318   4e-85
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...   318   5e-85
ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III s...   318   5e-85
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s...   318   5e-85

>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  338 bits (866), Expect = 7e-91
 Identities = 162/180 (90%), Positives = 168/180 (93%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQC+ NGP KYPGA  IRYPD S+  L +S RKR A+ELKYGYIVERHLEDGDVVLF
Sbjct: 401 EKLRQCILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLF 460

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALML
Sbjct: 461 NRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALML 520

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMD +DLPT
Sbjct: 521 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPT 580


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
           vinifera]
          Length = 1383

 Score =  338 bits (866), Expect = 7e-91
 Identities = 162/180 (90%), Positives = 168/180 (93%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQC+ NGP KYPGA  IRYPD S+  L +S RKR A+ELKYGYIVERHLEDGDVVLF
Sbjct: 401 EKLRQCILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLF 460

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALML
Sbjct: 461 NRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALML 520

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMD +DLPT
Sbjct: 521 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPT 580


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Solanum lycopersicum]
          Length = 1390

 Score =  334 bits (856), Expect = 9e-90
 Identities = 158/180 (87%), Positives = 171/180 (95%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQCVRNGP KYPGA FIR+PD + M L +SSRKR A+ELK+GYIV+RHLEDGD+VLF
Sbjct: 398 EKLRQCVRNGPNKYPGAKFIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLF 457

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALML
Sbjct: 458 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALML 517

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPK+GEILVASTQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD MDP DLP+
Sbjct: 518 MGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPS 577


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X2 [Solanum tuberosum]
          Length = 1243

 Score =  332 bits (852), Expect = 3e-89
 Identities = 157/180 (87%), Positives = 171/180 (95%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQCVRNGP KYPGA FIR+PD S + L ++SRKR A+ELK+GYIV+RHLEDGD+VLF
Sbjct: 398 EKLRQCVRNGPNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLF 457

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALML
Sbjct: 458 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALML 517

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPK+GEILVASTQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD MDP DLP+
Sbjct: 518 MGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPS 577


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X1 [Solanum tuberosum]
          Length = 1394

 Score =  332 bits (852), Expect = 3e-89
 Identities = 157/180 (87%), Positives = 171/180 (95%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQCVRNGP KYPGA FIR+PD S + L ++SRKR A+ELK+GYIV+RHLEDGD+VLF
Sbjct: 398 EKLRQCVRNGPNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLF 457

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALML
Sbjct: 458 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALML 517

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPK+GEILVASTQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD MDP DLP+
Sbjct: 518 MGVQNNLCTPKSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPS 577


>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
          Length = 1394

 Score =  326 bits (836), Expect = 2e-87
 Identities = 154/180 (85%), Positives = 168/180 (93%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           E+LRQCVRNGP KYPGA FI++PD + + L    R RAA++LKYGYIV RHL+DGD++LF
Sbjct: 403 ERLRQCVRNGPTKYPGAKFIKHPDGTEISLTGKIRHRAADDLKYGYIVCRHLQDGDIILF 462

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALML
Sbjct: 463 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALML 522

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDRA+FSL+CSYMGD MDPIDLPT
Sbjct: 523 MGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPT 582


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
           gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
           Japonica Group] gi|38347455|emb|CAD41360.2|
           OSJNBa0076N16.24 [Oryza sativa Japonica Group]
           gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
           Japonica Group] gi|116310339|emb|CAH67354.1|
           OSIGBa0130B08.14 [Oryza sativa Indica Group]
           gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
           Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218195112|gb|EEC77539.1| hypothetical protein
           OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score =  325 bits (834), Expect = 3e-87
 Identities = 152/180 (84%), Positives = 167/180 (92%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQC+RNGP K+PGANFI  PD + +HL+Y  R+ AA +LKYG +VERHLEDGD+VLF
Sbjct: 391 EKLRQCIRNGPHKHPGANFIIQPDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLF 450

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML
Sbjct: 451 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 510

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKD FYDR++FSL+CSY+GD M+ IDLPT
Sbjct: 511 MGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPT 570


>ref|XP_004169848.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
           subunit rpc1-like, partial [Cucumis sativus]
          Length = 693

 Score =  325 bits (832), Expect = 6e-87
 Identities = 155/180 (86%), Positives = 164/180 (91%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQCV NGP KYPGA  +R+ D S+  L  S RKR A+ELKYG IVERHLEDGDVVLF
Sbjct: 95  EKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLF 154

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIM HR R+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++L
Sbjct: 155 NRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILL 214

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMD +DLPT
Sbjct: 215 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPT 274


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Cucumis sativus]
          Length = 1400

 Score =  325 bits (832), Expect = 6e-87
 Identities = 155/180 (86%), Positives = 164/180 (91%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQCV NGP KYPGA  +R+ D S+  L  S RKR A+ELKYG IVERHLEDGDVVLF
Sbjct: 397 EKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLF 456

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIM HR R+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++L
Sbjct: 457 NRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILL 516

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMD +DLPT
Sbjct: 517 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPT 576


>gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus guttatus]
          Length = 1109

 Score =  324 bits (831), Expect = 7e-87
 Identities = 153/180 (85%), Positives = 167/180 (92%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           E+LRQCVRNGP KYPGA FI++PD + + L    R R A++LKYGYIV RHL+DGD++LF
Sbjct: 107 ERLRQCVRNGPTKYPGAKFIKHPDGTEISLTSKVRHRHADDLKYGYIVCRHLQDGDIILF 166

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALML
Sbjct: 167 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALML 226

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPKNGEILVASTQDFLTSS+LITRKDTFYDRA+FSL+CSYMGD MDPIDLPT
Sbjct: 227 MGVQNNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPT 286


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
           gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
           [Theobroma cacao]
          Length = 1395

 Score =  324 bits (831), Expect = 7e-87
 Identities = 156/180 (86%), Positives = 164/180 (91%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQCVRNGP KYPGA  +RYPD S   L    RKR A+ELK+G +V+RHLEDGD+VLF
Sbjct: 398 EKLRQCVRNGPSKYPGARMVRYPDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLF 457

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALML
Sbjct: 458 NRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALML 517

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD FYDRAAFSL+CSYMGDGMD IDLPT
Sbjct: 518 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPT 577


>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Brachypodium distachyon]
          Length = 1392

 Score =  324 bits (831), Expect = 7e-87
 Identities = 152/180 (84%), Positives = 166/180 (92%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQC+RNGP K+PGANF+  PD + +HL+Y  R+ AA +LKYG IVERHLEDGD+VLF
Sbjct: 391 EKLRQCIRNGPHKHPGANFVTQPDGTKLHLKYCDRRIAARDLKYGCIVERHLEDGDIVLF 450

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML
Sbjct: 451 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 510

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD FYDR+ F+L+CSY+GD M+ IDLPT
Sbjct: 511 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDNFYDRSYFTLLCSYLGDAMENIDLPT 570


>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Brachypodium distachyon]
          Length = 1400

 Score =  323 bits (829), Expect = 1e-86
 Identities = 151/180 (83%), Positives = 166/180 (92%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQC+RNGP K+PGANFI  PD++ +HL Y  R RAA +LKYG IVERHLEDGD+VLF
Sbjct: 396 EKLRQCIRNGPHKHPGANFIIQPDETKLHLNYCDRSRAARDLKYGCIVERHLEDGDIVLF 455

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA +L
Sbjct: 456 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFLL 515

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQ+NLCTPKNGEILVASTQDFLTSSFL+TRKDTFYDR+ F+L+CSY+GD M+ IDLPT
Sbjct: 516 MGVQSNLCTPKNGEILVASTQDFLTSSFLVTRKDTFYDRSYFTLLCSYLGDAMENIDLPT 575


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
           brachyantha]
          Length = 1389

 Score =  321 bits (823), Expect = 6e-86
 Identities = 150/180 (83%), Positives = 166/180 (92%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQC+RNGP K+PGANFI   D + +HL+Y  R+ AA +LKYG +VERHLEDGD+VLF
Sbjct: 391 EKLRQCIRNGPHKHPGANFIIQTDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLF 450

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML
Sbjct: 451 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 510

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKD FYDR++F+L+CSY+GD M+ IDLPT
Sbjct: 511 MGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDNFYDRSSFTLLCSYLGDAMENIDLPT 570


>ref|XP_003606553.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355507608|gb|AES88750.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 807

 Score =  319 bits (818), Expect = 2e-85
 Identities = 151/180 (83%), Positives = 166/180 (92%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQCVRNGP KYPGA  ++    +  +LR SSR R A+ELK+G IVERH+EDGD+V+F
Sbjct: 160 EKLRQCVRNGPDKYPGARMLKEAGGNSWNLRVSSRTRRADELKFGDIVERHIEDGDIVIF 219

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMS+MSHRAR+MPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL+L
Sbjct: 220 NRQPSLHRMSMMSHRARVMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLL 279

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           M VQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR++FSL+CSYMGDGMDPIDLPT
Sbjct: 280 MTVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSSFSLICSYMGDGMDPIDLPT 339


>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
          Length = 1030

 Score =  319 bits (817), Expect = 3e-85
 Identities = 151/180 (83%), Positives = 163/180 (90%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQC+RNGP KYPGANF+  PD     L+Y  R+  A +LK G IVERHLEDGDVVLF
Sbjct: 391 EKLRQCIRNGPFKYPGANFVTQPDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLF 450

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML
Sbjct: 451 NRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 510

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKDTFYDR++F+L+CSY+GDGM+ IDLPT
Sbjct: 511 MGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDTFYDRSSFTLLCSYLGDGMENIDLPT 570


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
           gi|241937900|gb|EES11045.1| hypothetical protein
           SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score =  318 bits (816), Expect = 4e-85
 Identities = 151/180 (83%), Positives = 163/180 (90%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQC+RNGP KYPGANF+  PD     L+Y  R+  A +LK G IVERHLEDGDVVLF
Sbjct: 391 EKLRQCIRNGPFKYPGANFVTQPDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLF 450

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML
Sbjct: 451 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 510

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQNNLCTPKNGEILVASTQDFLTSSFL+TRKDTFYDR++F+L+CSY+GD M+ IDLPT
Sbjct: 511 MGVQNNLCTPKNGEILVASTQDFLTSSFLVTRKDTFYDRSSFTLLCSYLGDAMENIDLPT 570


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
           gi|548832896|gb|ERM95665.1| hypothetical protein
           AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  318 bits (815), Expect = 5e-85
 Identities = 153/180 (85%), Positives = 166/180 (92%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQCVRNGP KYPGANF+    D+L  LRY ++KR A+ELK+G  VERHLEDG++VLF
Sbjct: 398 EKLRQCVRNGPVKYPGANFVISGGDTLS-LRYGNKKRKADELKFGDFVERHLEDGEIVLF 456

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMSIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALML
Sbjct: 457 NRQPSLHRMSIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNIHVPQTEEARTEALML 516

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           MGVQ+NLCTPKNGEILVASTQDFLTSS+LITRKDTFYDRA FSLMCSYMGDGM+ IDLPT
Sbjct: 517 MGVQHNLCTPKNGEILVASTQDFLTSSYLITRKDTFYDRATFSLMCSYMGDGMENIDLPT 576


>ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X2 [Cicer arietinum]
          Length = 1291

 Score =  318 bits (815), Expect = 5e-85
 Identities = 151/180 (83%), Positives = 165/180 (91%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQC+RNGP KYPGA  +R+   +  +L+ S RKR A+EL++G IV+RHLEDGDVVLF
Sbjct: 290 EKLRQCLRNGPDKYPGAKLLRHAGGTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLF 349

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMS+M HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL+L
Sbjct: 350 NRQPSLHRMSMMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLL 409

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           M VQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR+ FSL+CSYMGDGMDPIDLPT
Sbjct: 410 MTVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPT 469


>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X1 [Cicer arietinum]
          Length = 1399

 Score =  318 bits (815), Expect = 5e-85
 Identities = 151/180 (83%), Positives = 165/180 (91%)
 Frame = -2

Query: 540 EKLRQCVRNGPQKYPGANFIRYPDDSLMHLRYSSRKRAAEELKYGYIVERHLEDGDVVLF 361
           EKLRQC+RNGP KYPGA  +R+   +  +L+ S RKR A+EL++G IV+RHLEDGDVVLF
Sbjct: 398 EKLRQCLRNGPDKYPGAKLLRHAGGTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLF 457

Query: 360 NRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALML 181
           NRQPSLHRMS+M HRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAL+L
Sbjct: 458 NRQPSLHRMSMMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLL 517

Query: 180 MGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPIDLPT 1
           M VQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR+ FSL+CSYMGDGMDPIDLPT
Sbjct: 518 MTVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPT 577