BLASTX nr result
ID: Cocculus22_contig00029794
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00029794
(355 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007207044.1| hypothetical protein PRUPE_ppb025057mg [Prun... 80 4e-13
ref|XP_004980437.1| PREDICTED: uncharacterized protein LOC101781... 74 2e-11
ref|XP_007052567.1| Gag-pol polyprotein, putative [Theobroma cac... 74 2e-11
ref|XP_004292437.1| PREDICTED: uncharacterized protein LOC101306... 74 2e-11
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 72 1e-10
emb|CAD40072.1| OSJNBa0085C10.25 [Oryza sativa Japonica Group] 72 1e-10
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 71 1e-10
gb|ABC49720.1| gag-pol polyprotein [Fargesia robusta] 71 2e-10
gb|ABA96965.2| retrotransposon protein, putative, Ty3-gypsy subc... 71 2e-10
ref|XP_004977878.1| PREDICTED: uncharacterized protein LOC101763... 70 2e-10
emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera] 70 2e-10
gb|AAX95950.1| retrotransposon protein, putative, Ty3-gypsy sub-... 70 3e-10
gb|AAX14648.1| gag-pol polyprotein [Cenchrus compressus] 69 5e-10
ref|XP_004983356.1| PREDICTED: uncharacterized protein LOC101755... 69 7e-10
ref|XP_004983355.1| PREDICTED: uncharacterized protein LOC101754... 69 7e-10
ref|XP_004983333.1| PREDICTED: uncharacterized protein LOC101780... 69 7e-10
ref|XP_004980447.1| PREDICTED: uncharacterized protein LOC101759... 69 7e-10
ref|XP_004979207.1| PREDICTED: uncharacterized protein LOC101775... 69 7e-10
ref|XP_004973185.1| PREDICTED: uncharacterized protein LOC101760... 69 7e-10
ref|XP_004973182.1| PREDICTED: uncharacterized protein LOC101759... 69 7e-10
>ref|XP_007207044.1| hypothetical protein PRUPE_ppb025057mg [Prunus persica]
gi|462402686|gb|EMJ08243.1| hypothetical protein
PRUPE_ppb025057mg [Prunus persica]
Length = 317
Score = 79.7 bits (195), Expect = 4e-13
Identities = 47/98 (47%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = -3
Query: 296 GNGNTQLLSMPQFSKVMND-GVVYMLVSFDQHVEKAIPPAITHLLEEFCDVFXXXXXXXX 120
G GN L++ +F K + G+VYMLVS + + P + LLEEF DV
Sbjct: 32 GEGNN-FLNLSKFVKESEESGIVYMLVSKENVRDSEAPGVVHSLLEEFSDVLPDDLPSGL 90
Query: 119 XXLRDIQHQIDLVPGSVLPNRPHYRMSPKEHEELVKQV 6
LRDIQHQIDL PG+ L N+ HYRMS KEHEEL ++V
Sbjct: 91 PPLRDIQHQIDLFPGASLLNKAHYRMSLKEHEELKRRV 128
>ref|XP_004980437.1| PREDICTED: uncharacterized protein LOC101781709 [Setaria italica]
Length = 1055
Score = 73.9 bits (180), Expect = 2e-11
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Frame = -3
Query: 353 HNKVKITLVPSNELGLKSHGNGNTQLLSMPQFSKVMNDGVVYMLV------SFDQHVEKA 192
H +V ++ P E G+K G L + +++ +D V Y L+ S D + +
Sbjct: 622 HQQVASSVSPP-EKGIKL--KGGVMLATKCDLAEISDDDVCYALICKRALFSLDD-IASS 677
Query: 191 IPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHYRMSPKEHEELVK 12
+PPAIT++L+E+ D+F LR I+HQIDL+PG+ LPNR YR +P+E +E+ +
Sbjct: 678 LPPAITNILQEYEDIFPAEIPPGLPPLRGIEHQIDLIPGATLPNRAAYRTNPEETKEIQR 737
Query: 11 QV 6
QV
Sbjct: 738 QV 739
>ref|XP_007052567.1| Gag-pol polyprotein, putative [Theobroma cacao]
gi|508704828|gb|EOX96724.1| Gag-pol polyprotein,
putative [Theobroma cacao]
Length = 794
Score = 73.9 bits (180), Expect = 2e-11
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = -3
Query: 341 KITLVPSNELGLKSHGNGNTQLLSMPQFSKVMNDG--VVYMLVSFDQHVEKAIPPAITHL 168
KI L P + L++M +K + +LV + V + + +
Sbjct: 494 KIMLTPLKPEDCPKKQEKDKALITMSGLNKAFRKSSLLYLLLVCEENEVSSPLSKDVKPI 553
Query: 167 LEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHYRMSPKEHEELVKQV 6
+EEFCDV +RDIQH ID +PGS++PN+P YRMSP+EH+EL QV
Sbjct: 554 IEEFCDVVPEEIPHGLPPMRDIQHAIDFIPGSIIPNKPAYRMSPQEHKELQHQV 607
>ref|XP_004292437.1| PREDICTED: uncharacterized protein LOC101306407 [Fragaria vesca
subsp. vesca]
Length = 1300
Score = 73.9 bits (180), Expect = 2e-11
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = -3
Query: 299 HGNGNTQLLSMPQFSKVMNDGVVYMLVSFDQHVEK-AIPPAITHLLEEFCDVFXXXXXXX 123
H G+ L ++ +G+ YML+ + + P + LL+EF DV
Sbjct: 591 HAEGDNFLTMCNFLNESKEEGMFYMLIGREANDNAHEAPEVVASLLKEFVDVVPEELPVG 650
Query: 122 XXXLRDIQHQIDLVPGSVLPNRPHYRMSPKEHEELVKQV 6
LRDIQH ID VPG+ LPN+PHYRMSP+E++EL K V
Sbjct: 651 LPPLRDIQHHIDFVPGASLPNKPHYRMSPQEYDELNKYV 689
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 71.6 bits (174), Expect = 1e-10
Identities = 43/121 (35%), Positives = 70/121 (57%), Gaps = 6/121 (4%)
Frame = -3
Query: 350 NKVKITLVPSNELGLKSHGNGNTQLLSMPQFSKVM-NDGVVYMLVSFD-----QHVEKAI 189
N I +V +N+ G+K G+ L + +++ + V Y LV D Q ++ ++
Sbjct: 623 NNKNIKVVGNNKDGIKL--KGHCLLATKTDVNELFASTTVAYALVCKDALISIQDMQHSL 680
Query: 188 PPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHYRMSPKEHEELVKQ 9
PP IT++L+E+ DVF +R I+HQIDL+PG+ LPNR YR +P+E +E+ +Q
Sbjct: 681 PPVITNILQEYSDVFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQ 740
Query: 8 V 6
V
Sbjct: 741 V 741
>emb|CAD40072.1| OSJNBa0085C10.25 [Oryza sativa Japonica Group]
Length = 625
Score = 71.6 bits (174), Expect = 1e-10
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
Frame = -3
Query: 341 KITLVPSNEL-GLKSHGNGNTQLLSMPQFSKVMNDGVVYML------VSFDQHVEKAIPP 183
K L PS+++ G+K G L + + + ND + Y L VS D + +IPP
Sbjct: 328 KDKLSPSSKVEGIKL--KGGVMLATKCDIADISNDDMRYFLICKQALVSLDD-IASSIPP 384
Query: 182 AITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHYRMSPKEHEELVKQV 6
+T+LL+E+ DVF +R I+HQIDL+PG+ LPNR YR +P E +E+ +QV
Sbjct: 385 VVTNLLQEYEDVFPAEIPPGLPPMRGIEHQIDLIPGASLPNRAAYRTNPDETKEIQRQV 443
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/73 (46%), Positives = 51/73 (69%)
Frame = -3
Query: 224 LVSFDQHVEKAIPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHYR 45
L SF+ V ++PPA+T++L+EF DVF +R I+HQIDL+PG+ LPNR YR
Sbjct: 711 LFSFED-VPSSLPPAVTNILQEFTDVFPQDVPPGLPPIRGIEHQIDLIPGASLPNRAPYR 769
Query: 44 MSPKEHEELVKQV 6
+P+E +E+++QV
Sbjct: 770 TNPEETKEIMRQV 782
>gb|ABC49720.1| gag-pol polyprotein [Fargesia robusta]
Length = 222
Score = 70.9 bits (172), Expect = 2e-10
Identities = 34/73 (46%), Positives = 51/73 (69%)
Frame = -3
Query: 224 LVSFDQHVEKAIPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHYR 45
L SF++ V ++PPA+T+LL+E+ DVF +R I+HQIDL+PG+ LPNR YR
Sbjct: 117 LFSFEE-VPSSVPPAVTNLLQEYMDVFPKDVPPGLPPVRGIEHQIDLIPGASLPNRAPYR 175
Query: 44 MSPKEHEELVKQV 6
+P+E +E+ +QV
Sbjct: 176 TNPEETKEIQRQV 188
>gb|ABA96965.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 70.9 bits (172), Expect = 2e-10
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
Frame = -3
Query: 341 KITLVPSNEL-GLKSHGNGNTQLLSMPQFSKVMNDGVVYML------VSFDQHVEKAIPP 183
K L PS+++ G+K G + + + +++ +D + Y L VS D + ++PP
Sbjct: 472 KDKLSPSSKVEGIKL--KGGVMIATKCEIAEISDDDMCYFLICKQALVSLDD-IASSMPP 528
Query: 182 AITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHYRMSPKEHEELVKQV 6
+T+LL+E+ DVF +R I+HQIDL+PG+ LPNR YR +P+E +E+ +QV
Sbjct: 529 VVTNLLQEYEDVFPAEIPLGLPPMRGIEHQIDLIPGASLPNRAAYRTNPEETKEIQRQV 587
>ref|XP_004977878.1| PREDICTED: uncharacterized protein LOC101763064 [Setaria italica]
Length = 1131
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = -3
Query: 245 NDGVVYMLVSFD-----QHVEKAIPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLV 81
N V Y L+ Q + ++PPA+T+LL+E+ D+F R I+HQIDL+
Sbjct: 681 NTAVCYALICKQTLFSLQEIPSSLPPAVTNLLQEYADIFPNEVPPGLPPTRGIEHQIDLI 740
Query: 80 PGSVLPNRPHYRMSPKEHEELVKQV 6
PG+ LPNR YR +P+E +E+ +QV
Sbjct: 741 PGASLPNRAPYRTNPEETKEIQRQV 765
>emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera]
Length = 1292
Score = 70.5 bits (171), Expect = 2e-10
Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Frame = -3
Query: 353 HNKVKITLVPSNELGLKSHGNGNTQ---LLSMPQFSKVMNDG-VVYML----VSFDQHVE 198
HN K L P E+ + N Q +LSM QF + V++ L V + +
Sbjct: 438 HNGCKTILRPMKEVSPIKKSDENAQPKKVLSMCQFENESKETKVIFALMARKVEESKEQD 497
Query: 197 KAIPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHYRMSPKEHEEL 18
K P + +L++F D + +RD+QH IDL+PG+ LPN P YRM+P EH EL
Sbjct: 498 KEYPANVRKILDDFSDFWPTELPNQLPPMRDVQHAIDLIPGASLPNLPAYRMNPTEHAEL 557
Query: 17 VKQVN 3
+QV+
Sbjct: 558 KRQVD 562
>gb|AAX95950.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550294|gb|ABA93091.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 901
Score = 70.1 bits (170), Expect = 3e-10
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Frame = -3
Query: 332 LVPSNEL-GLKSHGNGNTQLLSMPQFSKVMNDGVVYML------VSFDQHVEKAIPPAIT 174
L PS+++ G+K G L + +++ +D + Y L VS D + +IPP +T
Sbjct: 148 LSPSSKVEGIKL--KGGVMLATKCDIAEISDDDICYSLICKQALVSLDD-IGSSIPPVVT 204
Query: 173 HLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHYRMSPKEHEELVKQV 6
+LL+E+ DVF +R I+ QIDL+PG+ LPNR YR +PKE +E+ +QV
Sbjct: 205 NLLQEYEDVFPAEIPPGLPPMRGIERQIDLIPGASLPNRAAYRTNPKETKEIQRQV 260
>gb|AAX14648.1| gag-pol polyprotein [Cenchrus compressus]
Length = 207
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = -3
Query: 251 VMNDGVVYMLVSFD-----QHVEKAIPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQID 87
+ + + Y LV D Q ++ ++PPAI ++L+E+ DVF +R I+HQID
Sbjct: 85 IASTSIAYALVCKDALISIQDMQHSLPPAIANILQEYSDVFPSEIPAGLPPIRGIEHQID 144
Query: 86 LVPGSVLPNRPHYRMSPKEHEELVKQV 6
L+PG+ LPNR YR +P+E +E+ +QV
Sbjct: 145 LIPGASLPNRAPYRTNPEETKEIQRQV 171
>ref|XP_004983356.1| PREDICTED: uncharacterized protein LOC101755676, partial [Setaria
italica]
Length = 425
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -3
Query: 227 MLVSFDQHVEKAIPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHY 48
+LVS D IPPA+ ++L+E+ DVF LR I+HQIDL+PG+ LPNR Y
Sbjct: 204 VLVSLDDAPSLDIPPAVANILQEYADVFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPY 263
Query: 47 RMSPKEHEELVKQV 6
R +P E +E+ +QV
Sbjct: 264 RTNPDETKEIQRQV 277
>ref|XP_004983355.1| PREDICTED: uncharacterized protein LOC101754866, partial [Setaria
italica]
Length = 456
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -3
Query: 227 MLVSFDQHVEKAIPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHY 48
+LVS D IPPA+ ++L+E+ DVF LR I+HQIDL+PG+ LPNR Y
Sbjct: 204 VLVSLDDTPSLDIPPAVANILQEYADVFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPY 263
Query: 47 RMSPKEHEELVKQV 6
R +P E +E+ +QV
Sbjct: 264 RTNPDETKEIQRQV 277
>ref|XP_004983333.1| PREDICTED: uncharacterized protein LOC101780524, partial [Setaria
italica]
Length = 456
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -3
Query: 227 MLVSFDQHVEKAIPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHY 48
+LVS D IPPA+ ++L+E+ DVF LR I+HQIDL+PG+ LPNR Y
Sbjct: 204 VLVSLDDAPSLDIPPAVANILQEYADVFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPY 263
Query: 47 RMSPKEHEELVKQV 6
R +P E +E+ +QV
Sbjct: 264 RTNPDETKEIQRQV 277
>ref|XP_004980447.1| PREDICTED: uncharacterized protein LOC101759287, partial [Setaria
italica]
Length = 551
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -3
Query: 227 MLVSFDQHVEKAIPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHY 48
+LVS D IPPA+ ++L+E+ DVF LR I+HQIDL+PG+ LPNR Y
Sbjct: 204 VLVSLDDAPSLDIPPAVANILQEYADVFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPY 263
Query: 47 RMSPKEHEELVKQV 6
R +P E +E+ +QV
Sbjct: 264 RTNPDETKEIQRQV 277
>ref|XP_004979207.1| PREDICTED: uncharacterized protein LOC101775230, partial [Setaria
italica]
Length = 421
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -3
Query: 227 MLVSFDQHVEKAIPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHY 48
+LVS D IPPA+ ++L+E+ DVF LR I+HQIDL+PG+ LPNR Y
Sbjct: 169 VLVSLDDAPSLDIPPAVANILQEYADVFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPY 228
Query: 47 RMSPKEHEELVKQV 6
R +P E +E+ +QV
Sbjct: 229 RTNPDETKEIQRQV 242
>ref|XP_004973185.1| PREDICTED: uncharacterized protein LOC101760453, partial [Setaria
italica]
Length = 456
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -3
Query: 227 MLVSFDQHVEKAIPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHY 48
+LVS D IPPA+ ++L+E+ DVF LR I+HQIDL+PG+ LPNR Y
Sbjct: 204 VLVSLDDAPSLDIPPAVANILQEYADVFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPY 263
Query: 47 RMSPKEHEELVKQV 6
R +P E +E+ +QV
Sbjct: 264 RTNPDETKEIQRQV 277
>ref|XP_004973182.1| PREDICTED: uncharacterized protein LOC101759238, partial [Setaria
italica]
Length = 456
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -3
Query: 227 MLVSFDQHVEKAIPPAITHLLEEFCDVFXXXXXXXXXXLRDIQHQIDLVPGSVLPNRPHY 48
+LVS D IPPA+ ++L+E+ DVF LR I+HQIDL+PG+ LPNR Y
Sbjct: 204 VLVSLDDAPSLDIPPAVANILQEYADVFPKDLPPGLPPLRGIEHQIDLIPGAQLPNRAPY 263
Query: 47 RMSPKEHEELVKQV 6
R +P E +E+ +QV
Sbjct: 264 RTNPDETKEIQRQV 277