BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00029720
         (297 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525134.1| pentatricopeptide repeat-containing protein,...    62   6e-08
ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
ref|XP_002326026.2| hypothetical protein POPTR_0019s12080g [Popu...    60   3e-07
ref|XP_006469041.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_004507282.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_006290415.1| hypothetical protein CARUB_v10019142mg [Caps...    57   3e-06
ref|XP_007132916.1| hypothetical protein PHAVU_011G136000g [Phas...    56   6e-06

>ref|XP_002525134.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535593|gb|EEF37261.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 792

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/81 (40%), Positives = 48/81 (59%)
 Frame = -2

Query: 254 DFLESFLQTCRRHQSLDTIKSLHALATTMGLQHHQRIFVNNNLIAGYSSVSELQIAREVF 75
           D L   L  C R +SL T K LHAL  T+G   +Q  ++ NN+I+ Y+S SEL +AR+VF
Sbjct: 12  DRLLYLLHACTRARSLATTKPLHALTITLGPNPNQPAYLFNNIISLYTSFSELSLARKVF 71

Query: 74  DKMPERXXXXXXXXXSAYVRH 12
           D MP+R         ++Y ++
Sbjct: 72  DNMPQRSIASYNSIITSYCKY 92


>ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Glycine max]
          Length = 732

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/82 (39%), Positives = 48/82 (58%)
 Frame = -2

Query: 248 LESFLQTCRRHQSLDTIKSLHALATTMGLQHHQRIFVNNNLIAGYSSVSELQIAREVFDK 69
           L + L+ C   +SLD  K LHAL+ TMG    Q IF++NN+I+ Y ++ E+  AR++FD 
Sbjct: 14  LLNLLEACCTLRSLDATKCLHALSITMGHIPKQSIFIHNNIISSYIALGEVLNARKLFDA 73

Query: 68  MPERXXXXXXXXXSAYVRHENL 3
           +P R         +AY R  N+
Sbjct: 74  LPHRTVVSYNTLITAYCRRGNV 95


>ref|XP_002326026.2| hypothetical protein POPTR_0019s12080g [Populus trichocarpa]
           gi|550317335|gb|EEF00408.2| hypothetical protein
           POPTR_0019s12080g [Populus trichocarpa]
          Length = 738

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/64 (45%), Positives = 42/64 (65%)
 Frame = -2

Query: 248 LESFLQTCRRHQSLDTIKSLHALATTMGLQHHQRIFVNNNLIAGYSSVSELQIAREVFDK 69
           L   LQ+C + ++LDT K LHAL  T+G    Q  FV NN+I+ Y+S +++ +A +VFD 
Sbjct: 15  LLQLLQSCSKLRALDTTKPLHALTITIGPNPEQSTFVYNNIISFYASFNQVPMAHKVFDN 74

Query: 68  MPER 57
           MP R
Sbjct: 75  MPHR 78


>ref|XP_006469041.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like isoform X1 [Citrus sinensis]
           gi|568829463|ref|XP_006469042.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g58590-like isoform X2 [Citrus sinensis]
           gi|568829465|ref|XP_006469043.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g58590-like isoform X3 [Citrus sinensis]
           gi|568829467|ref|XP_006469044.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g58590-like isoform X4 [Citrus sinensis]
           gi|568829469|ref|XP_006469045.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g58590-like isoform X5 [Citrus sinensis]
          Length = 740

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = -2

Query: 236 LQTCRRHQSLDTIKSLHALATTMGLQHHQRIFVNNNLIAGYSSVSELQIAREVFDKMPER 57
           L+TC R  SL + K LHAL  T G    Q IF+ N++I+ Y+S+ E   AR++FDKMP+R
Sbjct: 18  LKTCSRAPSLRSTKPLHALTVTAGPNPDQPIFLYNSIISLYASLGEPVTARKLFDKMPDR 77

Query: 56  XXXXXXXXXSAYVR 15
                    SAY R
Sbjct: 78  NVVSFNSIISAYSR 91


>ref|XP_004507282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Cicer arietinum]
          Length = 727

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/76 (39%), Positives = 45/76 (59%)
 Frame = -2

Query: 242 SFLQTCRRHQSLDTIKSLHALATTMGLQHHQRIFVNNNLIAGYSSVSELQIAREVFDKMP 63
           +FL++    +SLD  K LHAL+ T     +Q IF+NNN+I+ Y S +    AR+VFD+MP
Sbjct: 12  NFLESTSTFRSLDATKRLHALSITTPPIRNQSIFINNNIISSYISHNNFLQARKVFDEMP 71

Query: 62  ERXXXXXXXXXSAYVR 15
           +R         ++Y R
Sbjct: 72  QRTLVSYNTLVTSYTR 87


>ref|XP_006290415.1| hypothetical protein CARUB_v10019142mg [Capsella rubella]
           gi|482559122|gb|EOA23313.1| hypothetical protein
           CARUB_v10019142mg [Capsella rubella]
          Length = 741

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/66 (42%), Positives = 40/66 (60%)
 Frame = -2

Query: 254 DFLESFLQTCRRHQSLDTIKSLHALATTMGLQHHQRIFVNNNLIAGYSSVSELQIAREVF 75
           D L S L  CR+  S    K+LHAL+ T+     Q +F++NN+I  Y  + E+  A +VF
Sbjct: 13  DRLVSLLNVCRKAPSFARTKALHALSITLCSALQQPVFISNNIICLYEKLGEVSFAGKVF 72

Query: 74  DKMPER 57
           D+MPER
Sbjct: 73  DQMPER 78


>ref|XP_007132916.1| hypothetical protein PHAVU_011G136000g [Phaseolus vulgaris]
           gi|561005916|gb|ESW04910.1| hypothetical protein
           PHAVU_011G136000g [Phaseolus vulgaris]
          Length = 728

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/78 (37%), Positives = 47/78 (60%)
 Frame = -2

Query: 248 LESFLQTCRRHQSLDTIKSLHALATTMGLQHHQRIFVNNNLIAGYSSVSELQIAREVFDK 69
           L + L+ C   +S +T K LHAL+ T+G    Q IF++NN+++ Y+S+ E+  AR++FD 
Sbjct: 14  LLNLLEACSTIRSSNTAKCLHALSITIGPIPKQSIFIHNNILSLYTSLGEVLDARKMFDA 73

Query: 68  MPERXXXXXXXXXSAYVR 15
           +P R         +AY R
Sbjct: 74  LPNRTVVSYNTLITAYCR 91