BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00029716
         (418 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35069.3| unnamed protein product [Vitis vinifera]              232   4e-59
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...   231   1e-58
ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s...   228   9e-58
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...   228   9e-58
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...   228   9e-58
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...   228   9e-58
ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s...   227   1e-57
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...   227   1e-57
ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, par...   224   1e-56
ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, par...   224   1e-56
ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theob...   222   4e-56
ref|XP_007010804.1| DNA-directed RNA polymerase isoform 6 [Theob...   222   4e-56
ref|XP_007010803.1| DNA-directed RNA polymerase isoform 5 [Theob...   222   4e-56
ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theob...   222   4e-56
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...   222   4e-56
ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theob...   222   4e-56
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...   222   4e-56
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...   220   2e-55
gb|EXB83245.1| DNA-directed RNA polymerase III subunit RPC2 [Mor...   219   2e-55
ref|XP_004168526.1| PREDICTED: DNA-directed RNA polymerase III s...   219   2e-55

>emb|CBI35069.3| unnamed protein product [Vitis vinifera]
          Length = 1309

 Score =  232 bits (592), Expect = 4e-59
 Identities = 115/138 (83%), Positives = 122/138 (88%)
 Frame = -3

Query: 416  QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWD 237
            Q ISLLFEDLFKTM SEVKK ID +L K SRS   D SQ + RD IT GLER +STGNWD
Sbjct: 700  QLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQFIVRDSITVGLERTLSTGNWD 759

Query: 236  VKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 57
            VKRFRMHRKGM+QVVARLS+I ++GHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 760  VKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 819

Query: 56   EGEACGLVKNLALMTHVT 3
            EGEACGLVKNLALMTHVT
Sbjct: 820  EGEACGLVKNLALMTHVT 837


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           [Cucumis sativus]
          Length = 1158

 Score =  231 bits (588), Expect = 1e-58
 Identities = 113/138 (81%), Positives = 124/138 (89%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWD 237
           Q ISLLFEDLFKTM SEVKK ID +L K SRS   D SQHL  +II+ GLER +STGNWD
Sbjct: 385 QLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWD 444

Query: 236 VKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 57
           VKRFRMHRKGM+QV+ARLSFI+T+GH+T++SPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 445 VKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 504

Query: 56  EGEACGLVKNLALMTHVT 3
           EGEACGLVKNLALMTHVT
Sbjct: 505 EGEACGLVKNLALMTHVT 522


>ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           isoform X3 [Citrus sinensis]
          Length = 1058

 Score =  228 bits (580), Expect = 9e-58
 Identities = 110/138 (79%), Positives = 122/138 (88%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWD 237
           Q +SLLFEDLFKTM SEV+K +D +L K SRS   D SQ + RD IT GLER +STGN+D
Sbjct: 283 QLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFD 342

Query: 236 VKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 57
           VKRF+MHRKGMTQV+ARLSFI T+GHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 343 VKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 402

Query: 56  EGEACGLVKNLALMTHVT 3
           EGEACGLVKNLALMTHVT
Sbjct: 403 EGEACGLVKNLALMTHVT 420


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           isoform X1 [Citrus sinensis]
           gi|568883651|ref|XP_006494573.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC2-like isoform X2 [Citrus
           sinensis]
          Length = 1149

 Score =  228 bits (580), Expect = 9e-58
 Identities = 110/138 (79%), Positives = 122/138 (88%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWD 237
           Q +SLLFEDLFKTM SEV+K +D +L K SRS   D SQ + RD IT GLER +STGN+D
Sbjct: 374 QLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFD 433

Query: 236 VKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 57
           VKRF+MHRKGMTQV+ARLSFI T+GHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 434 VKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 493

Query: 56  EGEACGLVKNLALMTHVT 3
           EGEACGLVKNLALMTHVT
Sbjct: 494 EGEACGLVKNLALMTHVT 511


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           isoform X1 [Solanum tuberosum]
           gi|565393087|ref|XP_006362215.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC2-like isoform X2 [Solanum
           tuberosum]
          Length = 1153

 Score =  228 bits (580), Expect = 9e-58
 Identities = 110/138 (79%), Positives = 123/138 (89%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWD 237
           Q +SLLFEDLFKTMN E ++ ID +L + SRS  LD SQ++ +D IT GLER +STGNWD
Sbjct: 378 QLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIVKDSITMGLERTLSTGNWD 437

Query: 236 VKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 57
           VKRFRMHRKGMTQVVARLS+I ++GHMTKISPQFEKSRKVSGPRALQPSQ+GMLCPCDTP
Sbjct: 438 VKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQFGMLCPCDTP 497

Query: 56  EGEACGLVKNLALMTHVT 3
           EGEACGLVKNLALMTHVT
Sbjct: 498 EGEACGLVKNLALMTHVT 515


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
           gi|557534507|gb|ESR45625.1| hypothetical protein
           CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score =  228 bits (580), Expect = 9e-58
 Identities = 110/138 (79%), Positives = 122/138 (88%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWD 237
           Q +SLLFEDLFKTM SEV+K +D +L K SRS   D SQ + RD IT GLER +STGN+D
Sbjct: 374 QLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFD 433

Query: 236 VKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 57
           VKRF+MHRKGMTQV+ARLSFI T+GHMT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 434 VKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 493

Query: 56  EGEACGLVKNLALMTHVT 3
           EGEACGLVKNLALMTHVT
Sbjct: 494 EGEACGLVKNLALMTHVT 511


>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           [Solanum lycopersicum]
          Length = 1183

 Score =  227 bits (579), Expect = 1e-57
 Identities = 110/138 (79%), Positives = 123/138 (89%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWD 237
           Q +SLLFEDLFKTMN E ++ ID +L + SRS  LD SQ++ +D IT GLER +STGNWD
Sbjct: 408 QLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIIKDSITMGLERTLSTGNWD 467

Query: 236 VKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 57
           VKRFRMHRKGMTQVVARLS+I ++GHMTKISPQFEKSRKVSGPRALQPSQ+GMLCPCDTP
Sbjct: 468 VKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQFGMLCPCDTP 527

Query: 56  EGEACGLVKNLALMTHVT 3
           EGEACGLVKNLALMTHVT
Sbjct: 528 EGEACGLVKNLALMTHVT 545


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
           vinifera]
          Length = 1142

 Score =  227 bits (578), Expect = 1e-57
 Identities = 116/141 (82%), Positives = 122/141 (86%), Gaps = 3/141 (2%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHL---ARDIITHGLERAISTG 246
           Q ISLLFEDLFKTM SEVKK ID +L K SRS   D SQ L    RD IT GLER +STG
Sbjct: 364 QLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTG 423

Query: 245 NWDVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC 66
           NWDVKRFRMHRKGM+QVVARLS+I ++GHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC
Sbjct: 424 NWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPC 483

Query: 65  DTPEGEACGLVKNLALMTHVT 3
           DTPEGEACGLVKNLALMTHVT
Sbjct: 484 DTPEGEACGLVKNLALMTHVT 504


>ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, partial [Populus
           trichocarpa] gi|550321670|gb|EEF05483.2| hypothetical
           protein POPTR_0015s005302g, partial [Populus
           trichocarpa]
          Length = 1034

 Score =  224 bits (571), Expect = 1e-56
 Identities = 108/138 (78%), Positives = 125/138 (90%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWD 237
           Q ISLLFEDLFKTM +EV+K  D +L K++RS   D SQ++ RD IT+GLERA+STGNWD
Sbjct: 378 QLISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWD 437

Query: 236 VKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 57
           VKRFRM+RKG+TQV+ RLS++A++GHMT+ISPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 438 VKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 497

Query: 56  EGEACGLVKNLALMTHVT 3
           EGEACGLVKNLALMTHVT
Sbjct: 498 EGEACGLVKNLALMTHVT 515


>ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, partial [Populus
           trichocarpa] gi|550321669|gb|EEF05487.2| hypothetical
           protein POPTR_0015s005302g, partial [Populus
           trichocarpa]
          Length = 1035

 Score =  224 bits (571), Expect = 1e-56
 Identities = 108/138 (78%), Positives = 125/138 (90%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWD 237
           Q ISLLFEDLFKTM +EV+K  D +L K++RS   D SQ++ RD IT+GLERA+STGNWD
Sbjct: 379 QLISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWD 438

Query: 236 VKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 57
           VKRFRM+RKG+TQV+ RLS++A++GHMT+ISPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 439 VKRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 498

Query: 56  EGEACGLVKNLALMTHVT 3
           EGEACGLVKNLALMTHVT
Sbjct: 499 EGEACGLVKNLALMTHVT 516


>ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
           gi|508727718|gb|EOY19615.1| DNA-directed RNA polymerase
           isoform 7 [Theobroma cacao]
          Length = 1082

 Score =  222 bits (566), Expect = 4e-56
 Identities = 112/139 (80%), Positives = 123/139 (88%), Gaps = 1/139 (0%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHL-ARDIITHGLERAISTGNW 240
           Q ISLLFEDLFKT  SEV+K ID VL K SRS  LD SQ L +R+ IT GLER +STGN+
Sbjct: 283 QLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNF 342

Query: 239 DVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 60
           D+KRF+MHRKGMTQV+ARLSFI T+G+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 343 DIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 402

Query: 59  PEGEACGLVKNLALMTHVT 3
           PEGEACGLVKNLALMTHVT
Sbjct: 403 PEGEACGLVKNLALMTHVT 421


>ref|XP_007010804.1| DNA-directed RNA polymerase isoform 6 [Theobroma cacao]
           gi|508727717|gb|EOY19614.1| DNA-directed RNA polymerase
           isoform 6 [Theobroma cacao]
          Length = 1034

 Score =  222 bits (566), Expect = 4e-56
 Identities = 112/139 (80%), Positives = 123/139 (88%), Gaps = 1/139 (0%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHL-ARDIITHGLERAISTGNW 240
           Q ISLLFEDLFKT  SEV+K ID VL K SRS  LD SQ L +R+ IT GLER +STGN+
Sbjct: 382 QLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNF 441

Query: 239 DVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 60
           D+KRF+MHRKGMTQV+ARLSFI T+G+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 442 DIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 501

Query: 59  PEGEACGLVKNLALMTHVT 3
           PEGEACGLVKNLALMTHVT
Sbjct: 502 PEGEACGLVKNLALMTHVT 520


>ref|XP_007010803.1| DNA-directed RNA polymerase isoform 5 [Theobroma cacao]
           gi|508727716|gb|EOY19613.1| DNA-directed RNA polymerase
           isoform 5 [Theobroma cacao]
          Length = 1006

 Score =  222 bits (566), Expect = 4e-56
 Identities = 112/139 (80%), Positives = 123/139 (88%), Gaps = 1/139 (0%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHL-ARDIITHGLERAISTGNW 240
           Q ISLLFEDLFKT  SEV+K ID VL K SRS  LD SQ L +R+ IT GLER +STGN+
Sbjct: 377 QLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNF 436

Query: 239 DVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 60
           D+KRF+MHRKGMTQV+ARLSFI T+G+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 437 DIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 496

Query: 59  PEGEACGLVKNLALMTHVT 3
           PEGEACGLVKNLALMTHVT
Sbjct: 497 PEGEACGLVKNLALMTHVT 515


>ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theobroma cacao]
           gi|508727715|gb|EOY19612.1| DNA-directed RNA polymerase
           isoform 4 [Theobroma cacao]
          Length = 1034

 Score =  222 bits (566), Expect = 4e-56
 Identities = 112/139 (80%), Positives = 123/139 (88%), Gaps = 1/139 (0%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHL-ARDIITHGLERAISTGNW 240
           Q ISLLFEDLFKT  SEV+K ID VL K SRS  LD SQ L +R+ IT GLER +STGN+
Sbjct: 382 QLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNF 441

Query: 239 DVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 60
           D+KRF+MHRKGMTQV+ARLSFI T+G+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 442 DIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 501

Query: 59  PEGEACGLVKNLALMTHVT 3
           PEGEACGLVKNLALMTHVT
Sbjct: 502 PEGEACGLVKNLALMTHVT 520


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
           gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
           isoform 3 [Theobroma cacao]
          Length = 1153

 Score =  222 bits (566), Expect = 4e-56
 Identities = 112/139 (80%), Positives = 123/139 (88%), Gaps = 1/139 (0%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHL-ARDIITHGLERAISTGNW 240
           Q ISLLFEDLFKT  SEV+K ID VL K SRS  LD SQ L +R+ IT GLER +STGN+
Sbjct: 377 QLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNF 436

Query: 239 DVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 60
           D+KRF+MHRKGMTQV+ARLSFI T+G+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 437 DIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 496

Query: 59  PEGEACGLVKNLALMTHVT 3
           PEGEACGLVKNLALMTHVT
Sbjct: 497 PEGEACGLVKNLALMTHVT 515


>ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
           gi|508727713|gb|EOY19610.1| DNA-directed RNA polymerase
           isoform 2 [Theobroma cacao]
          Length = 1011

 Score =  222 bits (566), Expect = 4e-56
 Identities = 112/139 (80%), Positives = 123/139 (88%), Gaps = 1/139 (0%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHL-ARDIITHGLERAISTGNW 240
           Q ISLLFEDLFKT  SEV+K ID VL K SRS  LD SQ L +R+ IT GLER +STGN+
Sbjct: 382 QLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNF 441

Query: 239 DVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 60
           D+KRF+MHRKGMTQV+ARLSFI T+G+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 442 DIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 501

Query: 59  PEGEACGLVKNLALMTHVT 3
           PEGEACGLVKNLALMTHVT
Sbjct: 502 PEGEACGLVKNLALMTHVT 520


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
           gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
           isoform 1 [Theobroma cacao]
          Length = 1158

 Score =  222 bits (566), Expect = 4e-56
 Identities = 112/139 (80%), Positives = 123/139 (88%), Gaps = 1/139 (0%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHL-ARDIITHGLERAISTGNW 240
           Q ISLLFEDLFKT  SEV+K ID VL K SRS  LD SQ L +R+ IT GLER +STGN+
Sbjct: 382 QLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNF 441

Query: 239 DVKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 60
           D+KRF+MHRKGMTQV+ARLSFI T+G+MTK+SPQFEKSRKVSGPRALQPSQWGMLCPCDT
Sbjct: 442 DIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 501

Query: 59  PEGEACGLVKNLALMTHVT 3
           PEGEACGLVKNLALMTHVT
Sbjct: 502 PEGEACGLVKNLALMTHVT 520


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus
           communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA
           polymerase III subunit, putative [Ricinus communis]
          Length = 1139

 Score =  220 bits (560), Expect = 2e-55
 Identities = 106/138 (76%), Positives = 124/138 (89%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWD 237
           Q ISLLFEDLFKTM +EV++ ID VL K++RS   D +Q++ RD IT+GLER +STGN+D
Sbjct: 367 QLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTGNFD 426

Query: 236 VKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 57
           VKRF+MHRKGMTQV+ RLS+IA++G MT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 427 VKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTP 486

Query: 56  EGEACGLVKNLALMTHVT 3
           EGEACGLVKNLALMTHVT
Sbjct: 487 EGEACGLVKNLALMTHVT 504


>gb|EXB83245.1| DNA-directed RNA polymerase III subunit RPC2 [Morus notabilis]
          Length = 786

 Score =  219 bits (559), Expect = 2e-55
 Identities = 106/138 (76%), Positives = 122/138 (88%)
 Frame = -3

Query: 416 QHISLLFEDLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWD 237
           Q ISLLFEDLFK+M +EV++ +D +L K SRS   D SQ++  D IT GLER++STGNWD
Sbjct: 426 QLISLLFEDLFKSMITEVRRAVDNILSKPSRSSRFDFSQYIVTDKITVGLERSLSTGNWD 485

Query: 236 VKRFRMHRKGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 57
           VKRF+M+RKGMTQV+ARLSFI ++GHMT+I PQFEKSRKVSGPRALQPSQWGMLCPCDTP
Sbjct: 486 VKRFKMNRKGMTQVLARLSFIGSLGHMTRILPQFEKSRKVSGPRALQPSQWGMLCPCDTP 545

Query: 56  EGEACGLVKNLALMTHVT 3
           EGEACGLVKNLALMTHVT
Sbjct: 546 EGEACGLVKNLALMTHVT 563


>ref|XP_004168526.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like,
           partial [Cucumis sativus]
          Length = 750

 Score =  219 bits (559), Expect = 2e-55
 Identities = 106/130 (81%), Positives = 117/130 (90%)
 Frame = -3

Query: 392 DLFKTMNSEVKKNIDYVLEKKSRSCPLDTSQHLARDIITHGLERAISTGNWDVKRFRMHR 213
           DLFKTM SEVKK ID +L K SRS   D SQHL  +II+ GLER +STGNWDVKRFRMHR
Sbjct: 1   DLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWDVKRFRMHR 60

Query: 212 KGMTQVVARLSFIATVGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLV 33
           KGM+QV+ARLSFI+T+GH+T++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLV
Sbjct: 61  KGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLV 120

Query: 32  KNLALMTHVT 3
           KNLALMTHVT
Sbjct: 121 KNLALMTHVT 130