BLASTX nr result

ID: Cocculus22_contig00029611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00029611
         (312 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006404635.1| hypothetical protein EUTSA_v10000480mg, part...    43   2e-06
ref|XP_006937087.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleosi...    40   5e-06

>ref|XP_006404635.1| hypothetical protein EUTSA_v10000480mg, partial [Eutrema
           salsugineum] gi|557105763|gb|ESQ46088.1| hypothetical
           protein EUTSA_v10000480mg, partial [Eutrema salsugineum]
          Length = 415

 Score = 42.7 bits (99), Expect(2) = 2e-06
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +2

Query: 152 KALERPQHMLMRVVVEIHEDDID 220
           K +ERPQHMLMRVVV IH+DD+D
Sbjct: 126 KVVERPQHMLMRVVVGIHKDDVD 148



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +3

Query: 219 TAVKMYHLMSQSWFTHASPTL 281
           + +K Y++MS+ WFTHASP L
Sbjct: 149 STIKTYYMMSKRWFTHASPNL 169


>ref|XP_006937087.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
           reductase large subunit [Felis catus]
          Length = 785

 Score = 40.0 bits (92), Expect(2) = 5e-06
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +2

Query: 152 KALERPQHMLMRVVVEIHEDDID 220
           K  ERPQHMLMRV V IHE+DID
Sbjct: 162 KVAERPQHMLMRVSVGIHEEDID 184



 Score = 35.8 bits (81), Expect(2) = 5e-06
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = +3

Query: 222 AVKMYHLMSQSWFTHASPTL 281
           A++ Y+L+S+ WFTHASPTL
Sbjct: 186 AIETYNLLSEKWFTHASPTL 205


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