BLASTX nr result
ID: Cocculus22_contig00029511
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00029511
(660 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Viti... 98 3e-35
emb|CBI26657.3| unnamed protein product [Vitis vinifera] 98 3e-35
ref|XP_002883246.1| hypothetical protein ARALYDRAFT_479572 [Arab... 88 2e-32
ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-... 90 1e-31
ref|XP_004248554.1| PREDICTED: DNA mismatch repair protein MSH5-... 80 4e-31
ref|XP_006299772.1| hypothetical protein CARUB_v10015967mg [Caps... 84 1e-30
dbj|BAB02831.1| unnamed protein product [Arabidopsis thaliana] 83 1e-30
ref|XP_006406378.1| hypothetical protein EUTSA_v10022259mg [Eutr... 83 1e-30
ref|XP_007214518.1| hypothetical protein PRUPE_ppa015717mg [Prun... 86 1e-30
ref|XP_006338892.1| PREDICTED: DNA mismatch repair protein MSH5-... 80 2e-30
ref|NP_188683.3| DNA mismatch repair protein MSH5 [Arabidopsis ... 82 2e-30
gb|ABO69626.1| MutS-like protein 5 [Arabidopsis thaliana] 82 2e-30
gb|EXB66342.1| MutS protein-5-like protein [Morus notabilis] 87 3e-30
ref|XP_004295833.1| PREDICTED: DNA mismatch repair protein MSH5-... 84 1e-29
dbj|BAD95388.1| DNA mismatch repair protein [Arabidopsis thalian... 82 1e-29
gb|AAS76767.1| At3g20475 [Arabidopsis thaliana] 82 1e-29
ref|XP_004961619.1| PREDICTED: DNA mismatch repair protein MSH5-... 77 6e-28
ref|XP_006855938.1| hypothetical protein AMTR_s00037p00213740 [A... 82 1e-27
ref|XP_003571344.1| PREDICTED: mutS protein homolog 5-like [Brac... 75 2e-27
ref|XP_006654595.1| PREDICTED: DNA mismatch repair protein MSH5-... 75 9e-27
>ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Vitis vinifera]
Length = 807
Score = 97.8 bits (242), Expect(2) = 3e-35
Identities = 46/60 (76%), Positives = 54/60 (90%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
VLVCTHLTE+FNES LPK+EKIRFY+MSVL +++CT+ EDIVFLYRLVPGH+ LSYG H
Sbjct: 678 VLVCTHLTEMFNESCLPKSEKIRFYTMSVLRPDNNCTDIEDIVFLYRLVPGHALLSYGLH 737
Score = 77.8 bits (190), Expect(2) = 3e-35
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDG+GLLGGTINHFV DPPKV++
Sbjct: 640 SRSLCLLDEFGKGTLTEDGIGLLGGTINHFVASDDPPKVLV 680
>emb|CBI26657.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 97.8 bits (242), Expect(2) = 3e-35
Identities = 46/60 (76%), Positives = 54/60 (90%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
VLVCTHLTE+FNES LPK+EKIRFY+MSVL +++CT+ EDIVFLYRLVPGH+ LSYG H
Sbjct: 664 VLVCTHLTEMFNESCLPKSEKIRFYTMSVLRPDNNCTDIEDIVFLYRLVPGHALLSYGLH 723
Score = 77.8 bits (190), Expect(2) = 3e-35
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDG+GLLGGTINHFV DPPKV++
Sbjct: 626 SRSLCLLDEFGKGTLTEDGIGLLGGTINHFVASDDPPKVLV 666
>ref|XP_002883246.1| hypothetical protein ARALYDRAFT_479572 [Arabidopsis lyrata subsp.
lyrata] gi|297329086|gb|EFH59505.1| hypothetical protein
ARALYDRAFT_479572 [Arabidopsis lyrata subsp. lyrata]
Length = 807
Score = 87.8 bits (216), Expect(2) = 2e-32
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
VLVCTHLTE+ NES LP +EKI+FY+MSVL ++ E+IVFLYRL+PG + LSYG+H
Sbjct: 678 VLVCTHLTELLNESCLPVSEKIKFYTMSVLRPDTESAKMEEIVFLYRLIPGQTLLSYGEH 737
Query: 312 MFICI 326
+ +C+
Sbjct: 738 LCVCV 742
Score = 78.2 bits (191), Expect(2) = 2e-32
Identities = 33/41 (80%), Positives = 40/41 (97%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDG+GLLGGTI+HFV C++PP+V++
Sbjct: 640 SRSLCLLDEFGKGTLTEDGIGLLGGTISHFVTCTEPPRVLV 680
>ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-like [Cucumis sativus]
gi|449519898|ref|XP_004166971.1| PREDICTED: DNA mismatch
repair protein MSH5-like [Cucumis sativus]
Length = 807
Score = 89.7 bits (221), Expect(3) = 1e-31
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
VLVCTHLTE+ NESFLP E+I+FY+M+V+ ++ CT EDIVFLYRLVPGH+ SYG H
Sbjct: 678 VLVCTHLTELINESFLPMCERIKFYNMTVIRPDNDCTENEDIVFLYRLVPGHALPSYGLH 737
Score = 70.1 bits (170), Expect(3) = 1e-31
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +2
Query: 5 RSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
RSLCL+DEFGKGTLTEDG+GLLGGTI HF + +D PKV++
Sbjct: 641 RSLCLIDEFGKGTLTEDGIGLLGGTITHFASSNDSPKVLV 680
Score = 23.9 bits (50), Expect(3) = 1e-31
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 377 GLHCALLAGM 406
GLHCALLAG+
Sbjct: 735 GLHCALLAGV 744
>ref|XP_004248554.1| PREDICTED: DNA mismatch repair protein MSH5-like [Solanum
lycopersicum]
Length = 828
Score = 80.1 bits (196), Expect(3) = 4e-31
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
VLVCTHLTEIF+ L ++++I+ Y+MSVLS + C N EDIVFLYRLVPG + LSYG H
Sbjct: 697 VLVCTHLTEIFDSGCLLESDRIKCYTMSVLSPDKGCANVEDIVFLYRLVPGRALLSYGLH 756
Score = 79.7 bits (195), Expect(3) = 4e-31
Identities = 34/40 (85%), Positives = 39/40 (97%)
Frame = +2
Query: 5 RSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
RSLCL+DEFGKGTLTEDG+GLLGGTINHFV+C DPPKV++
Sbjct: 660 RSLCLMDEFGKGTLTEDGIGLLGGTINHFVSCYDPPKVLV 699
Score = 21.9 bits (45), Expect(3) = 4e-31
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 377 GLHCALLAGM 406
GLHCA LAG+
Sbjct: 754 GLHCAQLAGL 763
>ref|XP_006299772.1| hypothetical protein CARUB_v10015967mg [Capsella rubella]
gi|482568481|gb|EOA32670.1| hypothetical protein
CARUB_v10015967mg [Capsella rubella]
Length = 807
Score = 83.6 bits (205), Expect(2) = 1e-30
Identities = 39/60 (65%), Positives = 49/60 (81%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
VLVCTHLTE+ NES LP +EKI+FY+MSVL +++ N E+IVFLYRL+PG + LSYG H
Sbjct: 678 VLVCTHLTELLNESCLPVSEKIKFYTMSVLRPDTASANMEEIVFLYRLIPGQTLLSYGLH 737
Score = 76.6 bits (187), Expect(2) = 1e-30
Identities = 32/41 (78%), Positives = 39/41 (95%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDG+GLLGGTI+HF C++PP+V++
Sbjct: 640 SRSLCLLDEFGKGTLTEDGIGLLGGTISHFATCTEPPRVLV 680
>dbj|BAB02831.1| unnamed protein product [Arabidopsis thaliana]
Length = 748
Score = 83.2 bits (204), Expect(2) = 1e-30
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
V+VCTHLTE+ NES LP +EKI+FY+MSVL ++ N E+IVFLYRL+PG + LSYG+H
Sbjct: 578 VVVCTHLTELLNESCLPVSEKIKFYTMSVLRPDTESANMEEIVFLYRLIPGQTLLSYGEH 637
Score = 77.0 bits (188), Expect(2) = 1e-30
Identities = 32/41 (78%), Positives = 39/41 (95%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDG+GLLGGTI+HF C++PP+V++
Sbjct: 540 SRSLCLLDEFGKGTLTEDGIGLLGGTISHFATCAEPPRVVV 580
>ref|XP_006406378.1| hypothetical protein EUTSA_v10022259mg [Eutrema salsugineum]
gi|557107524|gb|ESQ47831.1| hypothetical protein
EUTSA_v10022259mg [Eutrema salsugineum]
Length = 807
Score = 83.2 bits (204), Expect(2) = 1e-30
Identities = 41/66 (62%), Positives = 49/66 (74%), Gaps = 3/66 (4%)
Frame = +3
Query: 123 CNN---VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSH 293
CN VLVCTHLTE+ NES LP +EKI+FY+MSVL + N E+IVFLYRL+PG +
Sbjct: 672 CNEPPRVLVCTHLTELLNESCLPVSEKIKFYTMSVLRPETESANMEEIVFLYRLIPGQTL 731
Query: 294 LSYGKH 311
LSYG H
Sbjct: 732 LSYGLH 737
Score = 76.6 bits (187), Expect(2) = 1e-30
Identities = 32/41 (78%), Positives = 39/41 (95%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDG+GLLGGTI+HF C++PP+V++
Sbjct: 640 SRSLCLLDEFGKGTLTEDGIGLLGGTISHFATCNEPPRVLV 680
>ref|XP_007214518.1| hypothetical protein PRUPE_ppa015717mg [Prunus persica]
gi|462410383|gb|EMJ15717.1| hypothetical protein
PRUPE_ppa015717mg [Prunus persica]
Length = 798
Score = 85.9 bits (211), Expect(2) = 1e-30
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
VLVCTHLTE+F+ES LPK++KI FY+MSVL ++S T+ EDIVFLYRLVPGH+ LSYG H
Sbjct: 668 VLVCTHLTELFSESCLPKSKKIEFYTMSVLRPDNS-TDIEDIVFLYRLVPGHALLSYGLH 726
Score = 73.9 bits (180), Expect(2) = 1e-30
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDGVGLLGGTIN+ V+ DPPKV++
Sbjct: 630 SRSLCLLDEFGKGTLTEDGVGLLGGTINYLVSHDDPPKVLV 670
>ref|XP_006338892.1| PREDICTED: DNA mismatch repair protein MSH5-like [Solanum
tuberosum]
Length = 831
Score = 79.7 bits (195), Expect(2) = 2e-30
Identities = 34/40 (85%), Positives = 39/40 (97%)
Frame = +2
Query: 5 RSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
RSLCL+DEFGKGTLTEDG+GLLGGTINHFV+C DPPKV++
Sbjct: 663 RSLCLMDEFGKGTLTEDGIGLLGGTINHFVSCYDPPKVLV 702
Score = 79.7 bits (195), Expect(2) = 2e-30
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
VLVCTHLTEIF+ S L ++++I+ Y+MSVLS + C + EDIVFLYRLVPG + LSYG H
Sbjct: 700 VLVCTHLTEIFDNSCLLESDRIKCYTMSVLSPDKDCADVEDIVFLYRLVPGRALLSYGLH 759
>ref|NP_188683.3| DNA mismatch repair protein MSH5 [Arabidopsis thaliana]
gi|395406789|sp|F4JEP5.1|MSH5_ARATH RecName: Full=DNA
mismatch repair protein MSH5; Short=AtMSH5; AltName:
Full=MutS protein homolog 5 gi|332642863|gb|AEE76384.1|
DNA mismatch repair protein MSH5 [Arabidopsis thaliana]
Length = 807
Score = 82.0 bits (201), Expect(2) = 2e-30
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
V+VCTHLTE+ NES LP +EKI+FY+MSVL ++ N E+IVFLYRL+PG + LSYG H
Sbjct: 678 VVVCTHLTELLNESCLPVSEKIKFYTMSVLRPDTESANMEEIVFLYRLIPGQTLLSYGLH 737
Score = 77.0 bits (188), Expect(2) = 2e-30
Identities = 32/41 (78%), Positives = 39/41 (95%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDG+GLLGGTI+HF C++PP+V++
Sbjct: 640 SRSLCLLDEFGKGTLTEDGIGLLGGTISHFATCAEPPRVVV 680
>gb|ABO69626.1| MutS-like protein 5 [Arabidopsis thaliana]
Length = 807
Score = 82.0 bits (201), Expect(2) = 2e-30
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
V+VCTHLTE+ NES LP +EKI+FY+MSVL ++ N E+IVFLYRL+PG + LSYG H
Sbjct: 678 VVVCTHLTELLNESCLPVSEKIKFYTMSVLXPDTESANMEEIVFLYRLIPGQTLLSYGLH 737
Score = 77.0 bits (188), Expect(2) = 2e-30
Identities = 32/41 (78%), Positives = 39/41 (95%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDG+GLLGGTI+HF C++PP+V++
Sbjct: 640 SRSLCLLDEFGKGTLTEDGIGLLGGTISHFATCAEPPRVVV 680
>gb|EXB66342.1| MutS protein-5-like protein [Morus notabilis]
Length = 776
Score = 87.0 bits (214), Expect(2) = 3e-30
Identities = 38/62 (61%), Positives = 54/62 (87%)
Frame = +3
Query: 126 NNVLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYG 305
+ VLVCTHLTE+F+E++LPK+EKI++++MSVL +++ + EDIVFLYRLVPG++ LSYG
Sbjct: 646 SKVLVCTHLTELFDENYLPKSEKIKYFTMSVLRPDNNSADAEDIVFLYRLVPGYALLSYG 705
Query: 306 KH 311
H
Sbjct: 706 LH 707
Score = 71.6 bits (174), Expect(2) = 3e-30
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDG+GLLGGTI+HFV+ +P KV++
Sbjct: 610 SRSLCLLDEFGKGTLTEDGIGLLGGTISHFVSRDEPSKVLV 650
>ref|XP_004295833.1| PREDICTED: DNA mismatch repair protein MSH5-like [Fragaria vesca
subsp. vesca]
Length = 809
Score = 84.0 bits (206), Expect(2) = 1e-29
Identities = 42/60 (70%), Positives = 52/60 (86%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
VLVC+HLTE+F+ES LPK++KI FY+MSVL ++S T+ EDIVFLYRLVPGH+ LSYG H
Sbjct: 679 VLVCSHLTELFSESCLPKSKKITFYTMSVLRPDNS-TDIEDIVFLYRLVPGHALLSYGLH 737
Score = 72.8 bits (177), Expect(2) = 1e-29
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDGVGLLGGTIN+F + PPKV++
Sbjct: 641 SRSLCLLDEFGKGTLTEDGVGLLGGTINYFASYDSPPKVLV 681
>dbj|BAD95388.1| DNA mismatch repair protein [Arabidopsis thaliana]
gi|110740262|dbj|BAF02028.1| putative DNA mismatch
repair protein [Arabidopsis thaliana]
Length = 545
Score = 82.0 bits (201), Expect(2) = 1e-29
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
V+VCTHLTE+ NES LP +EKI+FY+MSVL ++ N E+IVFLYRL+PG + LSYG H
Sbjct: 416 VVVCTHLTELLNESCLPVSEKIKFYTMSVLRPDTESANMEEIVFLYRLIPGQTLLSYGLH 475
Score = 74.3 bits (181), Expect(2) = 1e-29
Identities = 31/41 (75%), Positives = 38/41 (92%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTED +GLLGGTI+HF C++PP+V++
Sbjct: 378 SRSLCLLDEFGKGTLTEDDIGLLGGTISHFATCAEPPRVVV 418
>gb|AAS76767.1| At3g20475 [Arabidopsis thaliana]
Length = 360
Score = 82.0 bits (201), Expect(2) = 1e-29
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
V+VCTHLTE+ NES LP +EKI+FY+MSVL ++ N E+IVFLYRL+PG + LSYG H
Sbjct: 231 VVVCTHLTELLNESCLPVSEKIKFYTMSVLRPDTESANMEEIVFLYRLIPGQTLLSYGLH 290
Score = 74.3 bits (181), Expect(2) = 1e-29
Identities = 31/41 (75%), Positives = 38/41 (92%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTED +GLLGGTI+HF C++PP+V++
Sbjct: 193 SRSLCLLDEFGKGTLTEDDIGLLGGTISHFATCAEPPRVVV 233
>ref|XP_004961619.1| PREDICTED: DNA mismatch repair protein MSH5-like [Setaria italica]
Length = 814
Score = 77.4 bits (189), Expect(3) = 6e-28
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = +2
Query: 5 RSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
RSLCLLDEFGKGTLTEDG+GLLGGTI+HF NC PPKV+L
Sbjct: 647 RSLCLLDEFGKGTLTEDGIGLLGGTISHFANCDFPPKVLL 686
Score = 72.0 bits (175), Expect(3) = 6e-28
Identities = 34/60 (56%), Positives = 47/60 (78%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
VL+ THLTEIF ++LP++E I+ Y+MSVL+ + T+ +DI FLYRLVPG +HLS+G H
Sbjct: 684 VLLSTHLTEIFTGNYLPQSEHIKCYTMSVLNPDGQ-TSNDDITFLYRLVPGQAHLSFGLH 742
Score = 21.6 bits (44), Expect(3) = 6e-28
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 377 GLHCALLAGM 406
GLHCA LAG+
Sbjct: 740 GLHCARLAGV 749
>ref|XP_006855938.1| hypothetical protein AMTR_s00037p00213740 [Amborella trichopoda]
gi|548859759|gb|ERN17405.1| hypothetical protein
AMTR_s00037p00213740 [Amborella trichopoda]
Length = 805
Score = 81.6 bits (200), Expect(2) = 1e-27
Identities = 37/61 (60%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTN-GEDIVFLYRLVPGHSHLSYGK 308
V +CTHLTE+ +E LPK+E I+FY+M+VL + C N EDI+FLYRLVPGH+ LSYG
Sbjct: 673 VFICTHLTELLSEKCLPKSENIKFYTMNVLRPDKYCINEAEDIIFLYRLVPGHAFLSYGL 732
Query: 309 H 311
H
Sbjct: 733 H 733
Score = 68.6 bits (166), Expect(2) = 1e-27
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDG+GLL GT+ HF PPKV +
Sbjct: 635 SRSLCLLDEFGKGTLTEDGIGLLAGTVEHFAQFEHPPKVFI 675
>ref|XP_003571344.1| PREDICTED: mutS protein homolog 5-like [Brachypodium distachyon]
Length = 815
Score = 74.7 bits (182), Expect(2) = 2e-27
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDG+GLLGGTI+HF N PPKV+L
Sbjct: 647 SRSLCLLDEFGKGTLTEDGIGLLGGTISHFANYDYPPKVLL 687
Score = 74.3 bits (181), Expect(2) = 2e-27
Identities = 36/64 (56%), Positives = 50/64 (78%)
Frame = +3
Query: 120 YCNNVLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLS 299
Y VL+ THLTEIF E++LP++E+I+ Y+MSVL+ + T+ EDI+FLYRLVPG + LS
Sbjct: 681 YPPKVLLSTHLTEIFTENYLPQSEQIKCYTMSVLNPDGQ-TSNEDIIFLYRLVPGQALLS 739
Query: 300 YGKH 311
+G H
Sbjct: 740 FGLH 743
>ref|XP_006654595.1| PREDICTED: DNA mismatch repair protein MSH5-like [Oryza
brachyantha]
Length = 790
Score = 74.7 bits (182), Expect(3) = 9e-27
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +2
Query: 2 SRSLCLLDEFGKGTLTEDGVGLLGGTINHFVNCSDPPKVIL 124
SRSLCLLDEFGKGTLTEDG+GLLGGTI+HF N PPKV+L
Sbjct: 624 SRSLCLLDEFGKGTLTEDGIGLLGGTISHFTNYDCPPKVLL 664
Score = 70.9 bits (172), Expect(3) = 9e-27
Identities = 33/60 (55%), Positives = 48/60 (80%)
Frame = +3
Query: 132 VLVCTHLTEIFNESFLPKTEKIRFYSMSVLSSNSSCTNGEDIVFLYRLVPGHSHLSYGKH 311
VL+ TH+TEIF E++LP++E I+ Y+MSVL+ + T+ ED++FLYRLVPG + LS+G H
Sbjct: 662 VLLSTHMTEIFTENYLPESEHIKCYTMSVLNPDEQ-TDKEDVIFLYRLVPGQALLSFGLH 720
Score = 21.6 bits (44), Expect(3) = 9e-27
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 377 GLHCALLAGM 406
GLHCA LAG+
Sbjct: 718 GLHCAQLAGV 727