BLASTX nr result
ID: Cocculus22_contig00029463
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00029463
(364 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB63694.1| DNA repair protein REV1 [Morus notabilis] 66 6e-09
ref|XP_007201622.1| hypothetical protein PRUPE_ppa019938mg [Prun... 66 6e-09
ref|XP_006282158.1| hypothetical protein CARUB_v10028416mg [Caps... 65 1e-08
ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit... 65 1e-08
emb|CBI22513.3| unnamed protein product [Vitis vinifera] 65 1e-08
ref|XP_002313880.1| UMUC-like DNA repair family protein [Populus... 64 2e-08
ref|XP_006486986.1| PREDICTED: DNA repair protein REV1-like isof... 62 8e-08
ref|XP_006486985.1| PREDICTED: DNA repair protein REV1-like isof... 62 8e-08
ref|XP_006486983.1| PREDICTED: DNA repair protein REV1-like isof... 62 8e-08
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta... 61 2e-07
ref|XP_006422906.1| hypothetical protein CICLE_v10027730mg [Citr... 60 2e-07
ref|XP_007042551.1| DNA-directed DNA polymerases, putative [Theo... 60 4e-07
gb|AAC79145.1| hypothetical protein [Arabidopsis thaliana] gi|97... 60 4e-07
ref|NP_001119373.1| DNA repair protein REV1 [Arabidopsis thalian... 60 4e-07
ref|NP_199288.4| DNA repair protein REV1 [Arabidopsis thaliana] ... 60 4e-07
ref|XP_002865327.1| polymerase ATREV1-1105 [Arabidopsis lyrata s... 59 7e-07
ref|XP_004292096.1| PREDICTED: DNA repair protein REV1-like [Fra... 57 3e-06
gb|EMS65069.1| DNA repair protein REV1 [Triticum urartu] 56 6e-06
ref|XP_004231390.1| PREDICTED: DNA repair protein REV1-like [Sol... 56 6e-06
>gb|EXB63694.1| DNA repair protein REV1 [Morus notabilis]
Length = 605
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = -2
Query: 201 NVHIPTASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSSDCHTGSTT 22
N+ IP ++ D MP+SLSQVD SVL+QLP EL++NI+E L AHRK S++ G ++
Sbjct: 362 NLAIPAVGLEKPDLMPSSLSQVDTSVLQQLPQELRVNIIEQLSAHRKPGFSANSSLGPSS 421
Query: 21 ECAPDS 4
+ DS
Sbjct: 422 KHTQDS 427
>ref|XP_007201622.1| hypothetical protein PRUPE_ppa019938mg [Prunus persica]
gi|462397022|gb|EMJ02821.1| hypothetical protein
PRUPE_ppa019938mg [Prunus persica]
Length = 1073
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/59 (52%), Positives = 42/59 (71%)
Frame = -2
Query: 195 HIPTASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSSDCHTGSTTE 19
++ T+ TD MP+SLSQVD SVL+QLP+EL+++ILE LPAHR+ + SS G E
Sbjct: 855 NVSTSGPGNTDIMPSSLSQVDTSVLQQLPEELRVDILEQLPAHRRHDVSSSAALGPLVE 913
>ref|XP_006282158.1| hypothetical protein CARUB_v10028416mg [Capsella rubella]
gi|482550862|gb|EOA15056.1| hypothetical protein
CARUB_v10028416mg [Capsella rubella]
Length = 1098
Score = 65.1 bits (157), Expect = 1e-08
Identities = 32/57 (56%), Positives = 43/57 (75%), Gaps = 6/57 (10%)
Frame = -2
Query: 195 HIPTASA------DRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSSD 43
H+ TA A D TD MP+SLSQVDVSVL++LP+EL+ ++L PAHR+Q++SSD
Sbjct: 884 HLSTARASIQHTIDMTDLMPSSLSQVDVSVLQELPEELRADVLGAFPAHRRQQSSSD 940
>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
Length = 1175
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/52 (57%), Positives = 42/52 (80%)
Frame = -2
Query: 201 NVHIPTASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSS 46
NV P ++ +++D MP+SLSQVD+SVL+QLP E+ ++ILE LP HRK E+SS
Sbjct: 958 NVVDPASALEKSDLMPSSLSQVDISVLQQLPKEMWVDILEQLPVHRKPEHSS 1009
>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
Length = 1123
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/52 (57%), Positives = 42/52 (80%)
Frame = -2
Query: 201 NVHIPTASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSS 46
NV P ++ +++D MP+SLSQVD+SVL+QLP E+ ++ILE LP HRK E+SS
Sbjct: 906 NVVDPASALEKSDLMPSSLSQVDISVLQQLPKEMWVDILEQLPVHRKPEHSS 957
>ref|XP_002313880.1| UMUC-like DNA repair family protein [Populus trichocarpa]
gi|222850288|gb|EEE87835.1| UMUC-like DNA repair family
protein [Populus trichocarpa]
Length = 1191
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = -2
Query: 201 NVHIPTASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSSDCHTGSTT 22
N I + S + TD MP SLSQVDVSVL+QLP+EL+ +IL LPAHRKQE +S+ + +
Sbjct: 972 NEAISSVSPNNTDLMPLSLSQVDVSVLQQLPEELRGDILGQLPAHRKQELTSNAGSHPLS 1031
Query: 21 E 19
E
Sbjct: 1032 E 1032
>ref|XP_006486986.1| PREDICTED: DNA repair protein REV1-like isoform X4 [Citrus sinensis]
Length = 1000
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 10/106 (9%)
Frame = -2
Query: 342 SDSLCTTSMVKMEDAV-QGKKPLLTKI---------KEKDXXXXXXXXXXXXXXXXSNVH 193
S SLC S K E AV +GK+PL +++ K + +
Sbjct: 733 SSSLCN-SPYKTEGAVNKGKQPLFSEVTLKGGPVEVKAEQYTVEEMQAVSVLRAGSCSGA 791
Query: 192 IPTASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQE 55
T ++ D MP+SLSQVD+SVL+QLP+E++++ILE LPAHR+Q+
Sbjct: 792 STTLGLNKIDLMPSSLSQVDISVLQQLPEEVRVDILEQLPAHREQD 837
>ref|XP_006486985.1| PREDICTED: DNA repair protein REV1-like isoform X3 [Citrus sinensis]
Length = 1103
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 10/106 (9%)
Frame = -2
Query: 342 SDSLCTTSMVKMEDAV-QGKKPLLTKI---------KEKDXXXXXXXXXXXXXXXXSNVH 193
S SLC S K E AV +GK+PL +++ K + +
Sbjct: 836 SSSLCN-SPYKTEGAVNKGKQPLFSEVTLKGGPVEVKAEQYTVEEMQAVSVLRAGSCSGA 894
Query: 192 IPTASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQE 55
T ++ D MP+SLSQVD+SVL+QLP+E++++ILE LPAHR+Q+
Sbjct: 895 STTLGLNKIDLMPSSLSQVDISVLQQLPEEVRVDILEQLPAHREQD 940
>ref|XP_006486983.1| PREDICTED: DNA repair protein REV1-like isoform X1 [Citrus sinensis]
gi|568867315|ref|XP_006486984.1| PREDICTED: DNA repair
protein REV1-like isoform X2 [Citrus sinensis]
Length = 1120
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 10/106 (9%)
Frame = -2
Query: 342 SDSLCTTSMVKMEDAV-QGKKPLLTKI---------KEKDXXXXXXXXXXXXXXXXSNVH 193
S SLC S K E AV +GK+PL +++ K + +
Sbjct: 853 SSSLCN-SPYKTEGAVNKGKQPLFSEVTLKGGPVEVKAEQYTVEEMQAVSVLRAGSCSGA 911
Query: 192 IPTASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQE 55
T ++ D MP+SLSQVD+SVL+QLP+E++++ILE LPAHR+Q+
Sbjct: 912 STTLGLNKIDLMPSSLSQVDISVLQQLPEEVRVDILEQLPAHREQD 957
>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
transferase rev1, putative [Ricinus communis]
Length = 1200
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -2
Query: 186 TASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSSD 43
T TD MP+SLSQVD SVL+QLPDELK +IL +LPAHR+ E +S+
Sbjct: 902 TLGLGNTDLMPSSLSQVDTSVLQQLPDELKADILGLLPAHRRLELTSN 949
>ref|XP_006422906.1| hypothetical protein CICLE_v10027730mg [Citrus clementina]
gi|557524840|gb|ESR36146.1| hypothetical protein
CICLE_v10027730mg [Citrus clementina]
Length = 1041
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/44 (59%), Positives = 38/44 (86%)
Frame = -2
Query: 186 TASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQE 55
T ++ D MP+SLSQVD+SVL+QLP+E++++ILE LPAHR+Q+
Sbjct: 840 TLGLNKIDLMPSSLSQVDISVLQQLPEEVRVDILEQLPAHREQD 883
>ref|XP_007042551.1| DNA-directed DNA polymerases, putative [Theobroma cacao]
gi|508706486|gb|EOX98382.1| DNA-directed DNA polymerases,
putative [Theobroma cacao]
Length = 1208
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = -2
Query: 192 IPTASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSS 46
I + D D MP+SLSQVD SVL+QLP+EL+ ++ E LPAHR+QE S+
Sbjct: 1005 ISIQALDNNDLMPSSLSQVDTSVLQQLPEELRADLFESLPAHRRQEIST 1053
>gb|AAC79145.1| hypothetical protein [Arabidopsis thaliana]
gi|9758379|dbj|BAB08828.1| unnamed protein product
[Arabidopsis thaliana]
Length = 955
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/44 (56%), Positives = 38/44 (86%)
Frame = -2
Query: 174 DRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSSD 43
+ TD +P+SLSQVDVSVL++LP+EL+ ++L P+HR+Q++SSD
Sbjct: 750 EMTDLLPSSLSQVDVSVLQELPEELRADVLGAFPSHRRQQSSSD 793
>ref|NP_001119373.1| DNA repair protein REV1 [Arabidopsis thaliana]
gi|384950720|sp|A3EWL3.1|REV1_ARATH RecName: Full=DNA
repair protein REV1; Short=AtREV1; AltName:
Full=Rev1-like terminal deoxycytidyl transferase
gi|125656400|gb|ABN48548.1| polymerase ATREV1-1105
[Arabidopsis thaliana] gi|332007774|gb|AED95157.1| DNA
repair protein REV1 [Arabidopsis thaliana]
Length = 1105
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/44 (56%), Positives = 38/44 (86%)
Frame = -2
Query: 174 DRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSSD 43
+ TD +P+SLSQVDVSVL++LP+EL+ ++L P+HR+Q++SSD
Sbjct: 903 EMTDLLPSSLSQVDVSVLQELPEELRADVLGAFPSHRRQQSSSD 946
>ref|NP_199288.4| DNA repair protein REV1 [Arabidopsis thaliana]
gi|59796995|dbj|BAD89586.1| deoxycytidyl transferase
[Arabidopsis thaliana] gi|332007773|gb|AED95156.1| DNA
repair protein REV1 [Arabidopsis thaliana]
Length = 1101
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/44 (56%), Positives = 38/44 (86%)
Frame = -2
Query: 174 DRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSSD 43
+ TD +P+SLSQVDVSVL++LP+EL+ ++L P+HR+Q++SSD
Sbjct: 899 EMTDLLPSSLSQVDVSVLQELPEELRADVLGAFPSHRRQQSSSD 942
>ref|XP_002865327.1| polymerase ATREV1-1105 [Arabidopsis lyrata subsp. lyrata]
gi|297311162|gb|EFH41586.1| polymerase ATREV1-1105
[Arabidopsis lyrata subsp. lyrata]
Length = 1105
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/44 (56%), Positives = 39/44 (88%)
Frame = -2
Query: 174 DRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSSD 43
+ TD MP+SLSQVDVSVL++LP+EL++++L PA+R+Q++SS+
Sbjct: 903 EMTDLMPSSLSQVDVSVLQELPEELRVDVLGAFPANRRQQSSSN 946
>ref|XP_004292096.1| PREDICTED: DNA repair protein REV1-like [Fragaria vesca subsp. vesca]
Length = 1104
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/66 (43%), Positives = 43/66 (65%)
Frame = -2
Query: 201 NVHIPTASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSSDCHTGSTT 22
+V + T+ TD MPASLSQV+ SVL++LP EL+ ++LE LPAHR + +S + S
Sbjct: 893 DVAVLTSELGNTDIMPASLSQVEPSVLQELPQELRADLLEQLPAHRTSDLASSAASVSLA 952
Query: 21 ECAPDS 4
+ +S
Sbjct: 953 KIPGES 958
>gb|EMS65069.1| DNA repair protein REV1 [Triticum urartu]
Length = 1089
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = -2
Query: 201 NVHIPTASADRTDFMPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSSDCHTGSTT 22
N I T S R DFMP SLSQ D +VL++LP+++K ++ VLP HR + + C T + T
Sbjct: 870 NELIDTESVTRLDFMPNSLSQADFTVLQELPEDVKADLFNVLPLHRPMDPT--CRTSNIT 927
Query: 21 E 19
E
Sbjct: 928 E 928
>ref|XP_004231390.1| PREDICTED: DNA repair protein REV1-like [Solanum lycopersicum]
Length = 1121
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Frame = -2
Query: 159 MPASLSQVDVSVLEQLPDELKINILEVLPAHRKQENSSDCH--TGSTTECAP 10
MP+SLSQVD SV ++LP+EL+ +ILE+LPAHR E+S D + C+P
Sbjct: 932 MPSSLSQVDTSVFQELPEELRTDILELLPAHRNTESSLDASLVCANNQNCSP 983