BLASTX nr result

ID: Cocculus22_contig00029453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00029453
         (434 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002464513.1| hypothetical protein SORBIDRAFT_01g019890 [S...    49   6e-09
ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group] g...    54   7e-08
gb|EEC76673.1| hypothetical protein OsI_14649 [Oryza sativa Indi...    45   2e-06

>ref|XP_002464513.1| hypothetical protein SORBIDRAFT_01g019890 [Sorghum bicolor]
           gi|241918367|gb|EER91511.1| hypothetical protein
           SORBIDRAFT_01g019890 [Sorghum bicolor]
          Length = 323

 Score = 48.5 bits (114), Expect(3) = 6e-09
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = +3

Query: 282 LVMGRMILQVGL*WKVGVGSKINIWNDPWIPRLFTFRPISP 404
           ++ G  +L+ GL W+VG G  INIW DPWIPR  T +P SP
Sbjct: 171 ILHGVDLLKKGLIWRVGDGRHINIWADPWIPRGVTRQPASP 211



 Score = 32.3 bits (72), Expect(3) = 6e-09
 Identities = 16/33 (48%), Positives = 25/33 (75%), Gaps = 4/33 (12%)
 Frame = +1

Query: 100 LQKLLCR----EERMLSPAGKEIMLEFVALSIP 186
           ++K+ CR    +E+MLS AGKEI+++ VA +IP
Sbjct: 91  IKKIWCRVQGWQEKMLSKAGKEILVKAVAQAIP 123



 Score = 24.3 bits (51), Expect(3) = 6e-09
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 185 PNYIMSCFNVPTQICKNITKEVME 256
           P Y MSCF++   +C   +  V++
Sbjct: 123 PTYAMSCFDITKTLCDQNSSMVLK 146


>ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group]
            gi|255676397|dbj|BAH93171.1| Os05g0434000 [Oryza sativa
            Japonica Group]
          Length = 1478

 Score = 53.5 bits (127), Expect(2) = 7e-08
 Identities = 21/41 (51%), Positives = 30/41 (73%)
 Frame = +3

Query: 282  LVMGRMILQVGL*WKVGVGSKINIWNDPWIPRLFTFRPISP 404
            ++ G  +++ GL W+VG G  +NIWNDPW+P  FT RPI+P
Sbjct: 1188 ILKGVDLIKEGLVWRVGTGENVNIWNDPWMPVGFTRRPITP 1228



 Score = 28.5 bits (62), Expect(2) = 7e-08
 Identities = 12/22 (54%), Positives = 19/22 (86%)
 Frame = +1

Query: 121  EERMLSPAGKEIMLEFVALSIP 186
            +E++LS AGKEI+++ VA +IP
Sbjct: 1128 QEKLLSKAGKEILVKAVAQAIP 1149


>gb|EEC76673.1| hypothetical protein OsI_14649 [Oryza sativa Indica Group]
          Length = 290

 Score = 44.7 bits (104), Expect(3) = 2e-06
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +3

Query: 291 GRMILQVGL*WKVGVGSKINIWNDPWIPRLFTFRPIS 401
           G  +L+ G+ W+VG G  I IW DPW+PR  T RPI+
Sbjct: 145 GVELLKKGIIWRVGNGLSIRIWRDPWLPRDSTRRPIT 181



 Score = 27.3 bits (59), Expect(3) = 2e-06
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 185 PNYIMSCFNVPTQICKNITKEVMEKAVQG 271
           P Y+M  F +P  +C  +TK +      G
Sbjct: 105 PVYVMGIFKIPDSVCDELTKAIRNFCFSG 133



 Score = 24.6 bits (52), Expect(3) = 2e-06
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +1

Query: 91  DRVLQKLLCREERMLSPAGKEIMLEFVALSIP 186
           +++ +++L   E  LS  GKE++++ V  +IP
Sbjct: 74  EKIWKRILLWGENHLSMGGKEVLIKAVLQAIP 105


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