BLASTX nr result
ID: Cocculus22_contig00029453
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus22_contig00029453 (434 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002464513.1| hypothetical protein SORBIDRAFT_01g019890 [S... 49 6e-09 ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group] g... 54 7e-08 gb|EEC76673.1| hypothetical protein OsI_14649 [Oryza sativa Indi... 45 2e-06 >ref|XP_002464513.1| hypothetical protein SORBIDRAFT_01g019890 [Sorghum bicolor] gi|241918367|gb|EER91511.1| hypothetical protein SORBIDRAFT_01g019890 [Sorghum bicolor] Length = 323 Score = 48.5 bits (114), Expect(3) = 6e-09 Identities = 22/41 (53%), Positives = 28/41 (68%) Frame = +3 Query: 282 LVMGRMILQVGL*WKVGVGSKINIWNDPWIPRLFTFRPISP 404 ++ G +L+ GL W+VG G INIW DPWIPR T +P SP Sbjct: 171 ILHGVDLLKKGLIWRVGDGRHINIWADPWIPRGVTRQPASP 211 Score = 32.3 bits (72), Expect(3) = 6e-09 Identities = 16/33 (48%), Positives = 25/33 (75%), Gaps = 4/33 (12%) Frame = +1 Query: 100 LQKLLCR----EERMLSPAGKEIMLEFVALSIP 186 ++K+ CR +E+MLS AGKEI+++ VA +IP Sbjct: 91 IKKIWCRVQGWQEKMLSKAGKEILVKAVAQAIP 123 Score = 24.3 bits (51), Expect(3) = 6e-09 Identities = 8/24 (33%), Positives = 14/24 (58%) Frame = +2 Query: 185 PNYIMSCFNVPTQICKNITKEVME 256 P Y MSCF++ +C + V++ Sbjct: 123 PTYAMSCFDITKTLCDQNSSMVLK 146 >ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group] gi|255676397|dbj|BAH93171.1| Os05g0434000 [Oryza sativa Japonica Group] Length = 1478 Score = 53.5 bits (127), Expect(2) = 7e-08 Identities = 21/41 (51%), Positives = 30/41 (73%) Frame = +3 Query: 282 LVMGRMILQVGL*WKVGVGSKINIWNDPWIPRLFTFRPISP 404 ++ G +++ GL W+VG G +NIWNDPW+P FT RPI+P Sbjct: 1188 ILKGVDLIKEGLVWRVGTGENVNIWNDPWMPVGFTRRPITP 1228 Score = 28.5 bits (62), Expect(2) = 7e-08 Identities = 12/22 (54%), Positives = 19/22 (86%) Frame = +1 Query: 121 EERMLSPAGKEIMLEFVALSIP 186 +E++LS AGKEI+++ VA +IP Sbjct: 1128 QEKLLSKAGKEILVKAVAQAIP 1149 >gb|EEC76673.1| hypothetical protein OsI_14649 [Oryza sativa Indica Group] Length = 290 Score = 44.7 bits (104), Expect(3) = 2e-06 Identities = 19/37 (51%), Positives = 25/37 (67%) Frame = +3 Query: 291 GRMILQVGL*WKVGVGSKINIWNDPWIPRLFTFRPIS 401 G +L+ G+ W+VG G I IW DPW+PR T RPI+ Sbjct: 145 GVELLKKGIIWRVGNGLSIRIWRDPWLPRDSTRRPIT 181 Score = 27.3 bits (59), Expect(3) = 2e-06 Identities = 9/29 (31%), Positives = 14/29 (48%) Frame = +2 Query: 185 PNYIMSCFNVPTQICKNITKEVMEKAVQG 271 P Y+M F +P +C +TK + G Sbjct: 105 PVYVMGIFKIPDSVCDELTKAIRNFCFSG 133 Score = 24.6 bits (52), Expect(3) = 2e-06 Identities = 10/32 (31%), Positives = 21/32 (65%) Frame = +1 Query: 91 DRVLQKLLCREERMLSPAGKEIMLEFVALSIP 186 +++ +++L E LS GKE++++ V +IP Sbjct: 74 EKIWKRILLWGENHLSMGGKEVLIKAVLQAIP 105