BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00029408
         (315 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18974.3| unnamed protein product [Vitis vinifera]               69   7e-10
ref|XP_004300124.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_006340242.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|XP_004251179.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_007224224.1| hypothetical protein PRUPE_ppa017885mg [Prun...    58   2e-06
ref|XP_007019173.1| Tetratricopeptide repeat (TPR)-like superfam...    57   3e-06
ref|XP_007137466.1| hypothetical protein PHAVU_009G129200g [Phas...    57   3e-06
ref|XP_006581591.1| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06
ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>emb|CBI18974.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
 Frame = +2

Query: 119 YRGKFSLGLRVLARNYSS-EPVKEAPDPIKRVCKIMMTYPQLGLEPELNESGIRVSVDLV 295
           ++ K+SLG  +LAR  SS E +KE  DP KR+CKIM++ P+L L+  L+ESGIRVS  +V
Sbjct: 7   FQNKWSLGWNILARMCSSGEIIKETADPTKRICKIMISCPKLELDTSLSESGIRVSPIVV 66

Query: 296 EDILKR 313
           E++LKR
Sbjct: 67  ENVLKR 72


>ref|XP_004300124.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 484

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 4/63 (6%)
 Frame = +2

Query: 137 LGLR--VLARNYSS-EPVKE-APDPIKRVCKIMMTYPQLGLEPELNESGIRVSVDLVEDI 304
           LG R  VL+RNYSS E  +  A DP KR+CKIMM+ P L L+  L++SG+R+S ++VED+
Sbjct: 14  LGFRWMVLSRNYSSCEATRHIADDPTKRICKIMMSCPTLALDTALDQSGVRISPEIVEDV 73

Query: 305 LKR 313
           L R
Sbjct: 74  LVR 76


>ref|XP_006340242.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Solanum tuberosum]
          Length = 478

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = +2

Query: 149 VLARNYSSEPVKEAP-DPIKRVCKIMMTYPQLGLEPELNESGIRVSVDLVEDILKR 313
           +  R YSS+   E   DP+ R+CKIMM+ P+ GL+ EL++SGIRV  ++VED+LKR
Sbjct: 15  IFTRMYSSKETMEVKLDPLTRLCKIMMSCPKAGLDTELDQSGIRVLPEMVEDVLKR 70


>ref|XP_004251179.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Solanum lycopersicum]
          Length = 478

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/53 (54%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
 Frame = +2

Query: 158 RNYSSEPVKEAP-DPIKRVCKIMMTYPQLGLEPELNESGIRVSVDLVEDILKR 313
           R YSS+   E   DP+ R+CKIMM+ P++GL+ EL++SGIRV  ++VED+LKR
Sbjct: 18  RMYSSKETTEVKLDPLTRLCKIMMSCPKVGLDIELDQSGIRVLPEMVEDVLKR 70


>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 476

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = +2

Query: 167 SSEPVKEAPDPIKRVCKIMMTYPQLGLEPELNESGIRVSVDLVEDILKR 313
           S E +KE  DP KR+CKIM++ P+L L+  L+ESGIRVS  +VE++LKR
Sbjct: 4   SGEIIKETADPTKRICKIMISCPKLELDTSLSESGIRVSPIVVENVLKR 52


>ref|XP_007224224.1| hypothetical protein PRUPE_ppa017885mg [Prunus persica]
           gi|462421160|gb|EMJ25423.1| hypothetical protein
           PRUPE_ppa017885mg [Prunus persica]
          Length = 464

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
 Frame = +2

Query: 149 VLARNYSS-EPVKEAPDPIKRVCKIMMTYPQLGLEPELNESGIRVSVDLVEDILKR 313
           +L+R YSS E +++  DP K +CKIMM+ P L L+  L++SGIR+S ++VE++L R
Sbjct: 1   MLSRKYSSSEHIRQFSDPTKAICKIMMSCPTLALDTALDQSGIRISPEMVEEVLMR 56


>ref|XP_007019173.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|590599410|ref|XP_007019174.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
           gi|590599414|ref|XP_007019175.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|590599418|ref|XP_007019176.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
           gi|590599423|ref|XP_007019177.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508724501|gb|EOY16398.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724502|gb|EOY16399.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724503|gb|EOY16400.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724504|gb|EOY16401.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508724505|gb|EOY16402.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 480

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = +2

Query: 128 KFSLGLRVLAR-NYSSEPVKEAPDPIKRVCKIMMTYPQLGLEPELNESGIRVSVDLVEDI 304
           K  LG  VL R +YSSEP ++  D  K++CKIMM+   + L   L++SG+RV  ++VED+
Sbjct: 10  KLLLGWIVLVRRSYSSEPTRDVLDTSKKICKIMMSSSPVVLNTALDQSGLRVPPEVVEDV 69

Query: 305 LKR 313
           LKR
Sbjct: 70  LKR 72


>ref|XP_007137466.1| hypothetical protein PHAVU_009G129200g [Phaseolus vulgaris]
           gi|593328080|ref|XP_007137467.1| hypothetical protein
           PHAVU_009G129200g [Phaseolus vulgaris]
           gi|561010553|gb|ESW09460.1| hypothetical protein
           PHAVU_009G129200g [Phaseolus vulgaris]
           gi|561010554|gb|ESW09461.1| hypothetical protein
           PHAVU_009G129200g [Phaseolus vulgaris]
          Length = 480

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/49 (53%), Positives = 38/49 (77%)
 Frame = +2

Query: 167 SSEPVKEAPDPIKRVCKIMMTYPQLGLEPELNESGIRVSVDLVEDILKR 313
           +SE ++E  +  +RV K+MMT P LGL+  LN++G+RVS DLVE++LKR
Sbjct: 24  TSEAIQEVGEASERVSKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKR 72


>ref|XP_006581591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X2 [Glycine max]
           gi|571460055|ref|XP_006581592.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X3 [Glycine max]
           gi|571460057|ref|XP_006581593.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X4 [Glycine max]
           gi|571460059|ref|XP_006581594.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X5 [Glycine max]
           gi|571460061|ref|XP_006581595.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X6 [Glycine max]
          Length = 481

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/49 (51%), Positives = 37/49 (75%)
 Frame = +2

Query: 167 SSEPVKEAPDPIKRVCKIMMTYPQLGLEPELNESGIRVSVDLVEDILKR 313
           S   +++  +  +RVCK+MMT P LGL+  LN++G+RVS DLVE++LKR
Sbjct: 25  SEAMIQDVGEASERVCKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKR 73


>ref|XP_003526650.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 454

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/45 (53%), Positives = 36/45 (80%)
 Frame = +2

Query: 179 VKEAPDPIKRVCKIMMTYPQLGLEPELNESGIRVSVDLVEDILKR 313
           +++  +  +RVCK+MMT P LGL+  LN++G+RVS DLVE++LKR
Sbjct: 2   IQDVGEASERVCKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKR 46