BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00029167
         (326 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007025334.1| Pentatricopeptide, putative [Theobroma cacao...    84   3e-14
ref|XP_006585174.1| PREDICTED: pentatricopeptide repeat-containi...    82   8e-14
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi...    79   7e-13
ref|XP_006449535.1| hypothetical protein CICLE_v10014413mg [Citr...    79   7e-13
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...    79   7e-13
emb|CBI30711.3| unnamed protein product [Vitis vinifera]               79   7e-13
ref|XP_002522236.1| pentatricopeptide repeat-containing protein,...    75   1e-11
gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]      74   2e-11
ref|XP_003629790.1| Pentatricopeptide repeat-containing protein ...    72   8e-11
ref|XP_003608008.1| Pentatricopeptide repeat-containing protein ...    72   8e-11
ref|XP_006597484.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossyp...    71   1e-10
ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containi...    69   7e-10
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss...    69   9e-10
ref|XP_002870024.1| pentatricopeptide repeat-containing protein ...    69   9e-10
gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossyp...    69   9e-10
gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossyp...    68   1e-09
ref|XP_007148025.1| hypothetical protein PHAVU_006G174200g [Phas...    67   2e-09
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]         67   2e-09
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi...    66   6e-09

>ref|XP_007025334.1| Pentatricopeptide, putative [Theobroma cacao]
           gi|508780700|gb|EOY27956.1| Pentatricopeptide, putative
           [Theobroma cacao]
          Length = 874

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/86 (46%), Positives = 51/86 (59%)
 Frame = +1

Query: 67  IDRQKVDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKV 246
           ID Q  D N RI +FC++GNL NA+ LL  +P S+LE   YC++LQLC DL SL+DGKKV
Sbjct: 62  IDNQVTDYNARIFQFCQLGNLHNAMELLSMSPNSELESKTYCSILQLCADLKSLKDGKKV 121

Query: 247 HSVIXXXXXXXXXXXXXXXXQMYINC 324
           HS+I                  Y+ C
Sbjct: 122 HSIINSNGVAVDEVLGSKLVSFYVTC 147


>ref|XP_006585174.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like, partial [Glycine max]
          Length = 832

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 38/81 (46%), Positives = 54/81 (66%)
 Frame = +1

Query: 82  VDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKVHSVIX 261
           VD N +I +FCE+G+L+NA+ LL  + +S+LEL+ YC++LQLC +L SLEDGK+VHS+I 
Sbjct: 86  VDKNAKICKFCEMGDLRNAMKLLSRSQRSELELNTYCSVLQLCAELKSLEDGKRVHSIIS 145

Query: 262 XXXXXXXXXXXXXXXQMYINC 324
                           MY+NC
Sbjct: 146 SNGMAIDEVLGAKLVFMYVNC 166


>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Citrus sinensis]
          Length = 872

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 34/56 (60%), Positives = 44/56 (78%)
 Frame = +1

Query: 91  NTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKVHSVI 258
           N  I RFCEVGNL+ A+ +LY + KS+++   YC++LQLC DL SLEDGKKVHS+I
Sbjct: 67  NAEIGRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCADLKSLEDGKKVHSII 122


>ref|XP_006449535.1| hypothetical protein CICLE_v10014413mg [Citrus clementina]
           gi|557552146|gb|ESR62775.1| hypothetical protein
           CICLE_v10014413mg [Citrus clementina]
          Length = 725

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 34/56 (60%), Positives = 45/56 (80%)
 Frame = +1

Query: 91  NTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKVHSVI 258
           N  ISRFCEVGNL+ A+ +LY + KS+++   YC++LQLC +L SLEDGKKVHS+I
Sbjct: 67  NAEISRFCEVGNLEKAMEVLYSSEKSKIDTKTYCSILQLCAELKSLEDGKKVHSII 122


>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 36/86 (41%), Positives = 51/86 (59%)
 Frame = +1

Query: 67  IDRQKVDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKV 246
           ID +  D N  I RFCE+GNL+ A+ L+  +PK  LEL  YC++LQLC DL S++DG+++
Sbjct: 64  IDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRI 123

Query: 247 HSVIXXXXXXXXXXXXXXXXQMYINC 324
           HS+I                 MY+ C
Sbjct: 124 HSIIQSNDVEVDGVLGSKLVFMYVTC 149


>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 36/86 (41%), Positives = 51/86 (59%)
 Frame = +1

Query: 67  IDRQKVDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKV 246
           ID +  D N  I RFCE+GNL+ A+ L+  +PK  LEL  YC++LQLC DL S++DG+++
Sbjct: 64  IDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRI 123

Query: 247 HSVIXXXXXXXXXXXXXXXXQMYINC 324
           HS+I                 MY+ C
Sbjct: 124 HSIIQSNDVEVDGVLGSKLVFMYVTC 149


>ref|XP_002522236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538489|gb|EEF40094.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 640

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/85 (43%), Positives = 50/85 (58%)
 Frame = +1

Query: 70  DRQKVDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKVH 249
           D +  D N +I   CEVG+LKNA+ LL   PKS ++ + YC++LQLC +L SL++GKKVH
Sbjct: 63  DFKIADFNRKICELCEVGSLKNAIELLDMYPKSNIDSNTYCSILQLCAELNSLQEGKKVH 122

Query: 250 SVIXXXXXXXXXXXXXXXXQMYINC 324
           S I                 MY+NC
Sbjct: 123 SFISSSGIFVDGLLGTKLVFMYVNC 147


>gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]
          Length = 877

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/78 (47%), Positives = 46/78 (58%)
 Frame = +1

Query: 91  NTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKVHSVIXXXX 270
           N  IS FCE+GNLKNA+ LL  + KS+LE   YC++L+LC    SL DGK+VHSVI    
Sbjct: 74  NGEISYFCEMGNLKNAMELLCGSEKSELESRTYCSVLELCAQRKSLRDGKRVHSVIRDSG 133

Query: 271 XXXXXXXXXXXXQMYINC 324
                        MY+NC
Sbjct: 134 VEVDGYLGEKLVFMYVNC 151


>ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523812|gb|AET04266.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 908

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/78 (43%), Positives = 49/78 (62%)
 Frame = +1

Query: 91  NTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKVHSVIXXXX 270
           N +I++FCE+G+L+NA+ LL  +   +L L+ YC++LQLC +  SLEDGK+VHSVI    
Sbjct: 65  NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNG 124

Query: 271 XXXXXXXXXXXXQMYINC 324
                        MY+NC
Sbjct: 125 ISVDEALGAKLVFMYVNC 142


>ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355509063|gb|AES90205.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/78 (43%), Positives = 49/78 (62%)
 Frame = +1

Query: 91  NTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKVHSVIXXXX 270
           N +I++FCE+G+L+NA+ LL  +   +L L+ YC++LQLC +  SLEDGK+VHSVI    
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNG 399

Query: 271 XXXXXXXXXXXXQMYINC 324
                        MY+NC
Sbjct: 400 ISIDEALGAKLVFMYVNC 417


>ref|XP_006597484.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 873

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/82 (42%), Positives = 52/82 (63%)
 Frame = +1

Query: 79  KVDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKVHSVI 258
           K+D NT+I +FCEVG+L+NA+ LL  + KS+L+L+ Y ++LQLC +   L++GK VHSVI
Sbjct: 64  KLDENTKICKFCEVGDLRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVI 123

Query: 259 XXXXXXXXXXXXXXXXQMYINC 324
                            MY++C
Sbjct: 124 SSNGIPIEGVLGAKLVFMYVSC 145


>gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 36/86 (41%), Positives = 47/86 (54%)
 Frame = +1

Query: 67  IDRQKVDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKV 246
           IDRQ  D N +I  FC++GNL+NA+ L+    KS+LE   Y ++LQLC    SL DGKKV
Sbjct: 62  IDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTYSSVLQLCAGSKSLTDGKKV 121

Query: 247 HSVIXXXXXXXXXXXXXXXXQMYINC 324
           HS+I                 +Y  C
Sbjct: 122 HSIIKSNNVAVDEVLGLKLVSLYATC 147


>ref|XP_004504288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like isoform X1 [Cicer arietinum]
           gi|502140652|ref|XP_004504289.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 879

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 31/80 (38%), Positives = 48/80 (60%)
 Frame = +1

Query: 85  DCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKVHSVIXX 264
           D N +I +FCE+G+L+NA+  L  + + +L L+ YC++LQLC +  SLEDGK++H +I  
Sbjct: 73  DQNAKICKFCEMGDLRNAMESLIRSTRHELGLNTYCSVLQLCAERKSLEDGKRIHFIIVS 132

Query: 265 XXXXXXXXXXXXXXQMYINC 324
                          MY+NC
Sbjct: 133 KGIPIKGALGAKLVFMYVNC 152


>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
          Length = 875

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = +1

Query: 67  IDRQKVDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKV 246
           ID Q  D N +I  FC++G+L+NA+ L+    KS+LE   Y ++LQLC  L SL DGKKV
Sbjct: 62  IDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETKTYGSVLQLCAGLKSLTDGKKV 121

Query: 247 HSVI 258
           HS+I
Sbjct: 122 HSII 125


>ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315860|gb|EFH46283.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 871

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 35/85 (41%), Positives = 47/85 (55%)
 Frame = +1

Query: 70  DRQKVDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKVH 249
           DR   D NT++ RFCE GNLKNA+ LL+ + K  ++    C++LQLC D  SL+DGK+V 
Sbjct: 58  DRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVD 117

Query: 250 SVIXXXXXXXXXXXXXXXXQMYINC 324
           + I                 MY NC
Sbjct: 118 NFIRGNGFVLDSNLGSKLALMYTNC 142


>gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = +1

Query: 67  IDRQKVDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKV 246
           ID Q  D N +I  FC++G+L+NA+ L+    KS+LE   Y ++LQLC  L SL DGKKV
Sbjct: 62  IDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETKTYGSVLQLCAGLKSLTDGKKV 121

Query: 247 HSVI 258
           HS+I
Sbjct: 122 HSII 125


>gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 32/64 (50%), Positives = 43/64 (67%)
 Frame = +1

Query: 67  IDRQKVDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKV 246
           ID Q  D N +I  FC++G+L+NA+ L+    KS+LE   Y ++LQLC  L S  DGKKV
Sbjct: 62  IDHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETKTYSSVLQLCAGLKSFTDGKKV 121

Query: 247 HSVI 258
           HS+I
Sbjct: 122 HSII 125


>ref|XP_007148025.1| hypothetical protein PHAVU_006G174200g [Phaseolus vulgaris]
           gi|561021248|gb|ESW20019.1| hypothetical protein
           PHAVU_006G174200g [Phaseolus vulgaris]
          Length = 871

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/81 (39%), Positives = 51/81 (62%)
 Frame = +1

Query: 82  VDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKVHSVIX 261
           +D N +IS+FCEVG+L+NA+ LL  + KS+L+L+ + ++LQLC +   L++GK VHS+I 
Sbjct: 64  LDENAKISKFCEVGDLRNAVELLRMSQKSELDLNTFASILQLCAESKRLQEGKIVHSIIS 123

Query: 262 XXXXXXXXXXXXXXXQMYINC 324
                           MY++C
Sbjct: 124 SNGIPIEGLLGPKLVFMYVSC 144


>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/64 (50%), Positives = 43/64 (67%)
 Frame = +1

Query: 67  IDRQKVDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKV 246
           ID Q  D N +I  FC++G+L+NA+ L+    KS+LE   Y ++LQLC  L S  DGKKV
Sbjct: 62  IDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETKTYGSVLQLCAGLKSFTDGKKV 121

Query: 247 HSVI 258
           HS+I
Sbjct: 122 HSII 125


>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
           gi|449500809|ref|XP_004161200.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 30/82 (36%), Positives = 46/82 (56%)
 Frame = +1

Query: 79  KVDCNTRISRFCEVGNLKNALNLLYDTPKSQLELSVYCTLLQLCTDLISLEDGKKVHSVI 258
           ++D + +I  FCEVG+LKNA+ LL  +  S  +L  YC++LQLC +  S+ DG++V S+I
Sbjct: 117 ELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSII 176

Query: 259 XXXXXXXXXXXXXXXXQMYINC 324
                            MY+ C
Sbjct: 177 ESSGVMIDGILGVKLVFMYVKC 198