BLASTX nr result
ID: Cocculus22_contig00029092
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00029092
(775 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containi... 153 5e-47
ref|XP_007045557.1| Pentatricopeptide repeat 336, putative [Theo... 146 2e-44
ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containi... 142 1e-40
ref|XP_006847891.1| hypothetical protein AMTR_s00029p00104100 [A... 141 2e-39
ref|XP_006302331.1| hypothetical protein CARUB_v10020389mg [Caps... 116 4e-27
ref|XP_007026036.1| Pentatricopeptide repeat 336 [Theobroma caca... 108 5e-27
ref|NP_564786.1| pentatricopeptide repeat-containing protein [Ar... 113 4e-26
ref|XP_006847893.1| hypothetical protein AMTR_s00029p00104950 [A... 104 6e-26
gb|AAM62848.1| putative membrane-associated salt-inducible prote... 112 7e-26
ref|XP_006391954.1| hypothetical protein EUTSA_v10023498mg [Eutr... 111 8e-25
ref|XP_006417334.1| hypothetical protein EUTSA_v10007792mg [Eutr... 101 5e-24
gb|EPS65053.1| hypothetical protein M569_09725 [Genlisea aurea] 105 5e-24
ref|XP_006449054.1| hypothetical protein CICLE_v10015479mg [Citr... 108 1e-23
gb|EYU33903.1| hypothetical protein MIMGU_mgv1a018525mg [Mimulus... 103 2e-23
ref|NP_172629.1| pentatricopeptide repeat-containing protein [Ar... 100 2e-23
ref|XP_002892652.1| pentatricopeptide repeat-containing protein ... 100 2e-23
ref|XP_002886503.1| pentatricopeptide repeat-containing protein ... 114 5e-23
ref|XP_006468012.1| PREDICTED: pentatricopeptide repeat-containi... 104 2e-22
ref|XP_002518506.1| pentatricopeptide repeat-containing protein,... 105 2e-22
ref|XP_006858124.1| hypothetical protein AMTR_s00062p00111890 [A... 95 1e-21
>ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Vitis vinifera]
gi|297738261|emb|CBI27462.3| unnamed protein product
[Vitis vinifera]
Length = 386
Score = 153 bits (387), Expect(2) = 5e-47
Identities = 91/212 (42%), Positives = 121/212 (57%), Gaps = 36/212 (16%)
Frame = -2
Query: 618 KKSLESARSLLVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLV 439
+K +ESAR LL KME PD SYN+LL A EN D +F E+L+E++NKGL +
Sbjct: 180 QKDMESARKLLHKMEN-----PDIGSYNVLLEAYSENGDGVEFDEILKEIKNKGLEHDCT 234
Query: 438 TYNHKIMKFCKNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFE-------- 283
TYNH+I++FCKNK+ AKKLLDEMV+K +KPN Y +I F DFE
Sbjct: 235 TYNHRILRFCKNKESV-RAKKLLDEMVAKGVKPNSASYNMIIHGFCKVGDFESAQKVLGR 293
Query: 282 ----------------------------SALGVCEESLERRYVPPFSTVKDVVKGLVGNS 187
SAL +C+E + R++VPPF + +VKGLV S
Sbjct: 294 MLADGYVAPCSISYITLFQHMVKEGEFDSALNMCKEIIRRKWVPPFEAMDGLVKGLVEIS 353
Query: 186 KRDEAKKIVEKVKKQLRGSAVDSWTKVEEEGL 91
K + AK++VEK+KK+L+G+A DSW K E L
Sbjct: 354 KVEAAKEVVEKMKKRLKGNAADSW-KTHEAAL 384
Score = 61.6 bits (148), Expect(2) = 5e-47
Identities = 25/53 (47%), Positives = 39/53 (73%)
Frame = -3
Query: 770 TEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKN 612
TEKSLCA+L+VY+ D +H F ++P EIG+SPG +Y++ L+A C++K+
Sbjct: 130 TEKSLCAILTVYLDNDLIDQLHTVFNTMPSEIGVSPGTKSYSLVLKAFCQQKD 182
>ref|XP_007045557.1| Pentatricopeptide repeat 336, putative [Theobroma cacao]
gi|508709492|gb|EOY01389.1| Pentatricopeptide repeat
336, putative [Theobroma cacao]
Length = 395
Score = 146 bits (368), Expect(2) = 2e-44
Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 36/208 (17%)
Frame = -2
Query: 618 KKSLESARSLLVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLV 439
+ LESA + KM+ V+P+ +YNILLG L+N DE F ++E+ KGL NL
Sbjct: 188 ENKLESALEWVEKMD----VSPNIATYNILLGGYLKNGDENGFDGAMKEVSRKGLEGNLT 243
Query: 438 TYNHKIMKFCKNKDGAGDAKKLLDEMVSKNIKPNPGMY---------------------- 325
TYNH+I +FCK+K+ A A KLLDEMVSK +KPN Y
Sbjct: 244 TYNHRISRFCKSKECAR-ANKLLDEMVSKGVKPNSASYNTIIDGFCRIEDLESARKVLDK 302
Query: 324 --------------VGLIRCFVGANDFESALGVCEESLERRYVPPFSTVKDVVKGLVGNS 187
L+R V +F+SAL + ES++R++VPPF ++ +VKGLV S
Sbjct: 303 MLSDGYVLPCSFTYYTLLRSMVKEGEFDSALEMSMESIKRKWVPPFEAMEGLVKGLVERS 362
Query: 186 KRDEAKKIVEKVKKQLRGSAVDSWTKVE 103
+ +EAK++VEK+KK+L+G A++SW K+E
Sbjct: 363 RSEEAKQVVEKMKKRLKGDALESWGKIE 390
Score = 60.5 bits (145), Expect(2) = 2e-44
Identities = 22/58 (37%), Positives = 42/58 (72%)
Frame = -3
Query: 770 TEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSNLL 597
+EKSLCA+L+VY+ G F+ +++SF+++P ++G+ P + ++N+ L+A KE + L
Sbjct: 138 SEKSLCAILTVYLNNGMFEQIYESFKTIPEKLGVKPSVVSHNLILKAFVKENKLESAL 195
>ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449494815|ref|XP_004159654.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 142 bits (357), Expect(2) = 1e-40
Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 37/209 (17%)
Frame = -2
Query: 618 KKSLESARSLLVKMEKEKG-VTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNL 442
+ L SAR+ + ++ K+ V P+ S+ ILLGA N D F E+ +E+ +GL NL
Sbjct: 193 QNDLPSARNWIDELCKDDAKVIPNIDSFTILLGAYWSNGDMIGFDEIEKEISKRGLEFNL 252
Query: 441 VTYNHKIMKFCKNKDGAGDAKKLLDEMVSKNIKPNPGMY---------VG---------- 319
TYN++I + CKNK+ A AKK+LDEM+SK +KPN Y VG
Sbjct: 253 ATYNYRISRLCKNKECAR-AKKILDEMISKGVKPNSSSYDSIIHGYCDVGDIESAMKILK 311
Query: 318 -----------------LIRCFVGANDFESALGVCEESLERRYVPPFSTVKDVVKGLVGN 190
LIR V +FE AL C E+++RR+VPPF ++ +V+GLV
Sbjct: 312 GILEDGHVSPTSRIYYRLIRSMVKEGEFEMALETCRETIKRRWVPPFEAMEALVRGLVAM 371
Query: 189 SKRDEAKKIVEKVKKQLRGSAVDSWTKVE 103
SK +EAK++VEK+KK+L+G AVDSW K+E
Sbjct: 372 SKVEEAKEVVEKMKKRLKGPAVDSWRKIE 400
Score = 51.6 bits (122), Expect(2) = 1e-40
Identities = 20/53 (37%), Positives = 37/53 (69%)
Frame = -3
Query: 770 TEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKN 612
+EKSLCA+LSV++ + VH+ F S+P +IG++P ++N+ L+A ++ +
Sbjct: 143 SEKSLCAILSVFLDNSMPEKVHEMFRSIPEKIGVTPTAVSHNLVLKAFVRQND 195
>ref|XP_006847891.1| hypothetical protein AMTR_s00029p00104100 [Amborella trichopoda]
gi|548851196|gb|ERN09472.1| hypothetical protein
AMTR_s00029p00104100 [Amborella trichopoda]
Length = 454
Score = 141 bits (355), Expect(2) = 2e-39
Identities = 83/204 (40%), Positives = 119/204 (58%), Gaps = 35/204 (17%)
Frame = -2
Query: 609 LESARSLLVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLVTYN 430
L+SA +L KMEK G+ PD SYN L+ L D+T+ ELL+EM KG +P+LVTYN
Sbjct: 248 LDSAFEMLGKMEKI-GIKPDVVSYNTLIDGFLRAGDQTRVDELLKEMTEKGCAPDLVTYN 306
Query: 429 HKIMKFCKNKDGAGDAKKLLDEMVSKNIKPNP---------------------------- 334
+I+ FCK+K+ A+ LL+EM S+ I+PN
Sbjct: 307 LRILGFCKDKESV-KAQALLEEMRSRGIRPNSRSYNAVIFGFYKEGNLEEARRVYESIPK 365
Query: 333 -------GMYVGLIRCFVGANDFESALGVCEESLERRYVPPFSTVKDVVKGLVGNSKRDE 175
G Y LI+ + ++E+AL +C++S++R+++PPF T+K ++ GLV SK DE
Sbjct: 366 GDESPNSGTYFMLIQFEIEHGNYETALELCKKSIKRKWIPPFFTMKSLIDGLVKISKVDE 425
Query: 174 AKKIVEKVKKQLRGSAVDSWTKVE 103
AK IVE++KK+ GSA DSW KVE
Sbjct: 426 AKAIVEEMKKKFSGSAADSWMKVE 449
Score = 48.5 bits (114), Expect(2) = 2e-39
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = -3
Query: 773 RTEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKE 618
R+EKS A LS + +FD VH+ F+ +P + ISP + Y+I +RA C+E
Sbjct: 194 RSEKSFSATLSGLLLNKRFDDVHRLFDEIPNKFDISPTVFTYDIIIRAFCEE 245
>ref|XP_006302331.1| hypothetical protein CARUB_v10020389mg [Capsella rubella]
gi|482571041|gb|EOA35229.1| hypothetical protein
CARUB_v10020389mg [Capsella rubella]
Length = 408
Score = 116 bits (291), Expect(2) = 4e-27
Identities = 62/162 (38%), Positives = 98/162 (60%)
Frame = -2
Query: 588 LVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLVTYNHKIMKFC 409
++ M KE+GV ++YNI + + + + + LL M + G+ PN VTY+H I FC
Sbjct: 244 VLAMMKERGVNTGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIRGFC 303
Query: 408 KNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEESLERRYVPPF 229
N+D +AKKL MV++ KP+ Y LI DFE+AL +C+ES+E+ +VP F
Sbjct: 304 -NEDDLEEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFEAALSLCKESMEKNWVPSF 362
Query: 228 STVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVE 103
S +K +V GL +SK DEAK+++ +VK++ + + W +VE
Sbjct: 363 SIMKSLVNGLAKDSKVDEAKELIAQVKEKFTRN-TELWNEVE 403
Score = 32.0 bits (71), Expect(2) = 4e-27
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -3
Query: 773 RTEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSN 603
RT KSL ALL + + + + +P+ GI P + YN ++ C+ + S+
Sbjct: 149 RTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASS 205
>ref|XP_007026036.1| Pentatricopeptide repeat 336 [Theobroma cacao]
gi|508781402|gb|EOY28658.1| Pentatricopeptide repeat 336
[Theobroma cacao]
Length = 398
Score = 108 bits (271), Expect(2) = 5e-27
Identities = 58/163 (35%), Positives = 98/163 (60%)
Frame = -2
Query: 588 LVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLVTYNHKIMKFC 409
++ + KE GV ++YN + + + T+ LL M ++G+ PN VTYN+ I FC
Sbjct: 234 VLNLMKEYGVPVGVSTYNTRIQSLCMLKKSTEAKALLDGMLSRGMKPNTVTYNNLIHGFC 293
Query: 408 KNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEESLERRYVPPF 229
K + +AK+L M + ++P+ Y L+ DFE+AL +C+ES+E+ +VP F
Sbjct: 294 K-EGNLEEAKRLFKSMRNSGLEPDSQCYFTLVHFSCQGGDFEAALSICKESMEKNWVPSF 352
Query: 228 STVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVEE 100
S++K +V GL SK +EAK++++KVK++ +A D W +VE+
Sbjct: 353 SSMKSLVNGLSSMSKVEEAKELIQKVKEKFSKNA-DLWDEVEK 394
Score = 39.3 bits (90), Expect(2) = 5e-27
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = -3
Query: 773 RTEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSN 603
R+ KSL ALL + ++ V + F P+ GI P + YN A++A+C+ + S+
Sbjct: 139 RSAKSLNALLVAGIVSKDYEEVKRIFVEFPKRYGIEPDLECYNSAIKAMCESGSSSS 195
>ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g61870, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8
[Arabidopsis thaliana] gi|3367521|gb|AAC28506.1| Similar
to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene [Arabidopsis thaliana]
gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis
thaliana] gi|32815835|gb|AAP88326.1| At1g61870
[Arabidopsis thaliana] gi|332195777|gb|AEE33898.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 408
Score = 113 bits (282), Expect(2) = 4e-26
Identities = 61/162 (37%), Positives = 99/162 (61%)
Frame = -2
Query: 588 LVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLVTYNHKIMKFC 409
++ M K++GV ++YNI + + + + + LL M + G+ PN VTY+H I FC
Sbjct: 244 VLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC 303
Query: 408 KNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEESLERRYVPPF 229
N+D +AKKL MV++ KP+ Y LI DFE+AL +C+ES+E+ +VP F
Sbjct: 304 -NEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 228 STVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVE 103
S +K +V GL +SK +EAK+++ +VK++ + V+ W +VE
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRN-VELWNEVE 403
Score = 32.0 bits (71), Expect(2) = 4e-26
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -3
Query: 773 RTEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSN 603
RT KSL ALL + + + + +P+ GI P + YN ++ C+ + S+
Sbjct: 149 RTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASS 205
>ref|XP_006847893.1| hypothetical protein AMTR_s00029p00104950 [Amborella trichopoda]
gi|548851198|gb|ERN09474.1| hypothetical protein
AMTR_s00029p00104950 [Amborella trichopoda]
Length = 405
Score = 104 bits (259), Expect(2) = 6e-26
Identities = 65/176 (36%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Frame = -2
Query: 618 KKSLESARSLLVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLV 439
KK E A + +M K G + DT +YN L + + +LL EME + P+ +
Sbjct: 219 KKKPEEAEKIWDEMVKN-GCSLDTPAYNAKLIYIANHGKPEEALKLLGEMEASNVKPDAL 277
Query: 438 TYNHKIMKFCKNKDGAGDAKKLLDEMVS--KNIKPNPGMYVGLIRCFVGANDFESALGVC 265
+YN +M + KN + +AKK+ +EM S K PN Y IR V D++ AL VC
Sbjct: 278 SYNFLLMCYLKNGEKE-EAKKVYEEMASNSKGCYPNQMTYRIFIRYLVQKKDYDLALEVC 336
Query: 264 EESLERRYVPPFSTVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVEEE 97
+ES+ RR P F TV D++KGLV NSK +EAK++++ V L + + +W K E +
Sbjct: 337 KESIRRRKAPKFQTVSDLIKGLVKNSKEEEAKQVIKMVHDTLPPNVLHAWKKFEAQ 392
Score = 40.4 bits (93), Expect(2) = 6e-26
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -3
Query: 773 RTEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALC 624
RT S LL+ +FD V K F+ +P + GISP +Y+I L++LC
Sbjct: 133 RTVSSFNVLLTALKDSEKFDRVTKLFDEIPTKFGISPDHFSYSIFLKSLC 182
>gb|AAM62848.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 407
Score = 112 bits (280), Expect(2) = 7e-26
Identities = 61/162 (37%), Positives = 98/162 (60%)
Frame = -2
Query: 588 LVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLVTYNHKIMKFC 409
++ M K +GV ++YNI + + + + + LL M + G+ PN VTY+H I FC
Sbjct: 243 VLAMMKARGVNIGVSTYNIRIQSLCKKKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC 302
Query: 408 KNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEESLERRYVPPF 229
N+D +AKKL MV++ KP+ Y LI DFE+AL +C+ES+E+ +VP F
Sbjct: 303 -NEDDFEEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 361
Query: 228 STVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVE 103
S +K +V GL +SK +EAK+++ +VK++ + V+ W +VE
Sbjct: 362 SIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRN-VELWNEVE 402
Score = 32.0 bits (71), Expect(2) = 7e-26
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -3
Query: 773 RTEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSN 603
RT KSL ALL + + + + +P+ GI P + YN ++ C+ + S+
Sbjct: 148 RTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASS 204
>ref|XP_006391954.1| hypothetical protein EUTSA_v10023498mg [Eutrema salsugineum]
gi|557088460|gb|ESQ29240.1| hypothetical protein
EUTSA_v10023498mg [Eutrema salsugineum]
Length = 408
Score = 111 bits (278), Expect(2) = 8e-25
Identities = 60/162 (37%), Positives = 96/162 (59%)
Frame = -2
Query: 588 LVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLVTYNHKIMKFC 409
++ M KE+GV+ +++NI + + + + + LL M + G+ PN VTY H I FC
Sbjct: 244 VLAMMKERGVSVGVSTHNIRIQSLCKRKKSAEAKALLDGMLSSGMKPNSVTYGHLIHGFC 303
Query: 408 KNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEESLERRYVPPF 229
D +AKKL MV++ KP+ Y LI DFE+ L +C+ES+E+ +VP F
Sbjct: 304 SEGD-LDEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETGLSLCKESMEKNWVPSF 362
Query: 228 STVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVE 103
+K +V GLV +SK +EAKK++ +VK++ + V+ W +VE
Sbjct: 363 GIMKSLVNGLVKDSKVEEAKKLIAQVKEKFTRN-VELWNEVE 403
Score = 29.3 bits (64), Expect(2) = 8e-25
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -3
Query: 773 RTEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSN 603
RT KSL ALL + + + + +P+ I P + YN ++ C+ + S+
Sbjct: 149 RTVKSLNALLFACLVAKDYKEAKRVYMEMPKMYKIEPDLETYNRMIKVFCESGSASS 205
>ref|XP_006417334.1| hypothetical protein EUTSA_v10007792mg [Eutrema salsugineum]
gi|557095105|gb|ESQ35687.1| hypothetical protein
EUTSA_v10007792mg [Eutrema salsugineum]
Length = 406
Score = 101 bits (252), Expect(2) = 5e-24
Identities = 55/162 (33%), Positives = 92/162 (56%)
Frame = -2
Query: 588 LVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLVTYNHKIMKFC 409
++++ +E GV +YNI++ + + + LL + + + PN VTY+H I FC
Sbjct: 242 VLRVMRELGVHVGVATYNIMIHCLCKRKKSAEAKALLDGVVSSRMRPNSVTYSHLIHGFC 301
Query: 408 KNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEESLERRYVPPF 229
++ +A L + MV KP+ Y LI C DFE+AL +C ES+E+ +VP F
Sbjct: 302 -SEGNLDEAMSLFEVMVRSGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 360
Query: 228 STVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVE 103
S +K +V GL SK +E+K+++ +VK++ +A D W +VE
Sbjct: 361 SVMKWLVSGLASVSKVEESKELIAQVKQKFTRNA-DLWNEVE 401
Score = 36.6 bits (83), Expect(2) = 5e-24
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = -3
Query: 773 RTEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSN 603
RT KSL ALL + ++ + + +P+ GI P + YN+ ++ LC+ + S+
Sbjct: 147 RTVKSLNALLYACLMAKDYNEARRVYFEMPKIYGIEPDLETYNLMIKVLCESGSTSS 203
>gb|EPS65053.1| hypothetical protein M569_09725 [Genlisea aurea]
Length = 397
Score = 105 bits (263), Expect(2) = 5e-24
Identities = 62/173 (35%), Positives = 94/173 (54%)
Frame = -2
Query: 618 KKSLESARSLLVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLV 439
+K L M K GV P YN + + + + ++ +L + +K + PN V
Sbjct: 224 EKKLSDVEKTTDLMNKH-GVLPGIAFYNTKIMSLCKLQKSSEAKAVLDYILSKKMKPNCV 282
Query: 438 TYNHKIMKFCKNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEE 259
TYNH I FCK D AKKL +M + +KP Y LI DFESALG+C++
Sbjct: 283 TYNHLIHGFCKEGD-LDLAKKLFKQMNDRKLKPESSCYFTLIYFLCQGRDFESALGICKD 341
Query: 258 SLERRYVPPFSTVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVEE 100
S+ + +VP ST++ +V GLV K DEA++I+ VK++ +A D W+++EE
Sbjct: 342 SISKGWVPNISTMRSLVNGLVSIEKVDEAREIISVVKEKFSRNA-DRWSEIEE 393
Score = 32.3 bits (72), Expect(2) = 5e-24
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -3
Query: 773 RTEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSN 603
R+ K+L +LL + G++ + + F P + + P + YN AL+ LC E SN
Sbjct: 138 RSIKALNSLLISCVLAGEYGELKRIFADFPSKYNLQPDLETYNNALKGLC-ESGSSN 193
>ref|XP_006449054.1| hypothetical protein CICLE_v10015479mg [Citrus clementina]
gi|557551665|gb|ESR62294.1| hypothetical protein
CICLE_v10015479mg [Citrus clementina]
Length = 402
Score = 108 bits (271), Expect(2) = 1e-23
Identities = 61/172 (35%), Positives = 100/172 (58%)
Frame = -2
Query: 618 KKSLESARSLLVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLV 439
++ E +L ME+ G+ + YN+ + + + R + LL EM +KG+ PN V
Sbjct: 229 EEKYEDVNKVLQMMERY-GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
Query: 438 TYNHKIMKFCKNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEE 259
TY+H I FCK+ + +AKK M + + PN +Y ++ D+E+ALG C+E
Sbjct: 288 TYSHFIYGFCKDGNFE-EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
Query: 258 SLERRYVPPFSTVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVE 103
S+E+ +VP FST+K +V GL G SK EAK+++ VK++ + VD+W ++E
Sbjct: 347 SIEKGWVPNFSTMKSLVTGLAGASKVSEAKELIGLVKEKFTKN-VDTWNEIE 397
Score = 27.7 bits (60), Expect(2) = 1e-23
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 752 ALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSN 603
ALL + V + F P+ GI P + YN ++A C+ + S+
Sbjct: 150 ALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESGDSSS 199
>gb|EYU33903.1| hypothetical protein MIMGU_mgv1a018525mg [Mimulus guttatus]
Length = 401
Score = 103 bits (257), Expect(2) = 2e-23
Identities = 58/174 (33%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
Frame = -2
Query: 618 KKSLESARSLLVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLV 439
++ + ++V M+K GV YN+++ + + + + LL E+ K ++PN V
Sbjct: 228 EEKFDDVEKMIVSMKKY-GVEKGIGIYNVMMQSLCKLKRSNEAKALLDEILLKNMTPNSV 286
Query: 438 TYNHKIMKFCKNKDGAGD-AKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCE 262
TY H I FCK +G D AK L +EM+S+ +KP Y ++ NDFE AL +C+
Sbjct: 287 TYGHLIHGFCK--EGKLDVAKSLFEEMISRELKPQAECYFTMVYYLCKGNDFEVALTICK 344
Query: 261 ESLERRYVPPFSTVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVEE 100
ES+ + ++P +T++ +V GL+ K DEAK+I+ +K + + VD W ++EE
Sbjct: 345 ESMSKGWIPNMTTMRCLVSGLISVEKVDEAKEIIAVMKDKFSRN-VDPWIEIEE 397
Score = 32.7 bits (73), Expect(2) = 2e-23
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -3
Query: 764 KSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCK 621
K+L +LL + G++ + + F P + G+ P + YN L+ LC+
Sbjct: 145 KALNSLLFSCIIAGEYSEMKRVFSDFPGKYGLEPNVDTYNTVLKGLCE 192
>ref|NP_172629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200551|sp|Q9SAB4.1|PPR33_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g11630, mitochondrial; Flags: Precursor
gi|4835794|gb|AAD30260.1|AC007296_21 Strong similarity
to gi|3367521 F8K4.8 from Arabidopsis thaliana BAC
gb|AC004392 [Arabidopsis thaliana]
gi|14326576|gb|AAK60332.1|AF385742_1 At1g11630/F25C20_22
[Arabidopsis thaliana] gi|19548051|gb|AAL87389.1|
At1g11630/F25C20_22 [Arabidopsis thaliana]
gi|21593339|gb|AAM65288.1| putative membrane-associated
salt-inducible protein [Arabidopsis thaliana]
gi|332190642|gb|AEE28763.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 100 bits (248), Expect(2) = 2e-23
Identities = 58/168 (34%), Positives = 92/168 (54%)
Frame = -2
Query: 588 LVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLVTYNHKIMKFC 409
+++M E GV +YNI++ + + + L+ + + + PN VTY+ I FC
Sbjct: 239 VMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFC 298
Query: 408 KNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEESLERRYVPPF 229
+++ +A L + MV KP+ Y LI C DFE+AL +C ES+E+ +VP F
Sbjct: 299 -SEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 228 STVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVEEEGLLP 85
S +K +V GL SK DEAK+++ VK++ + VD W +VE LP
Sbjct: 358 SVMKWLVNGLASRSKVDEAKELIAVVKEKFTRN-VDLWNEVEAALPLP 404
Score = 35.8 bits (81), Expect(2) = 2e-23
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -3
Query: 773 RTEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSN 603
RT KSL ALL + + ++ + +P+ GI P + YN +R LC+ + S+
Sbjct: 144 RTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSS 200
>ref|XP_002892652.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338494|gb|EFH68911.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 403
Score = 100 bits (249), Expect(2) = 2e-23
Identities = 57/162 (35%), Positives = 92/162 (56%)
Frame = -2
Query: 588 LVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLVTYNHKIMKFC 409
+++M E GV +YNI++ + + + L+ + + + PN VTY+ I FC
Sbjct: 239 VMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFC 298
Query: 408 KNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEESLERRYVPPF 229
+++ +A L + MV KP+ Y LIRC DFE+AL +C ES+E+ +VP F
Sbjct: 299 -SEENLDEAMNLFEVMVYSGYKPDSECYFTLIRCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 228 STVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVE 103
S +K +V GL SK DEAK+++ +VK++ + VD W +VE
Sbjct: 358 SIMKWLVNGLASVSKVDEAKELIAQVKEKFTRN-VDLWNEVE 398
Score = 35.4 bits (80), Expect(2) = 2e-23
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -3
Query: 773 RTEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRS 606
RT KSL ALL + + ++ + +P+ GI P + YN +R LC+ + S
Sbjct: 144 RTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTS 199
>ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297332344|gb|EFH62762.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 408
Score = 114 bits (284), Expect = 5e-23
Identities = 62/159 (38%), Positives = 97/159 (61%)
Frame = -2
Query: 579 MEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLVTYNHKIMKFCKNK 400
M K++GV ++YNI + + + + + LL M + G+ PN VTY+H I FC N+
Sbjct: 247 MMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIRGFC-NE 305
Query: 399 DGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEESLERRYVPPFSTV 220
D +AKKL MV++ KP+ Y LI DFE+AL +C+ES+E+ +VP FS +
Sbjct: 306 DDFEEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETALVLCKESMEKNWVPSFSIM 365
Query: 219 KDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVE 103
K +V GL +SK DEAK+++ +VK++ + V+ W +VE
Sbjct: 366 KSLVNGLAKDSKVDEAKELIGQVKEKFTRN-VELWNEVE 403
>ref|XP_006468012.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Citrus sinensis]
Length = 402
Score = 104 bits (260), Expect(2) = 2e-22
Identities = 59/172 (34%), Positives = 99/172 (57%)
Frame = -2
Query: 618 KKSLESARSLLVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLV 439
++ E +L ME+ G+ + YN+ + + + R + LL EM +KG+ PN V
Sbjct: 229 EEKYEDVNKVLQMMERY-GMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKGMKPNSV 287
Query: 438 TYNHKIMKFCKNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEE 259
TY+H I FCK+ + +AKK M + + PN +Y ++ D+E+ALG C+E
Sbjct: 288 TYSHFIYGFCKDGNFE-EAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKE 346
Query: 258 SLERRYVPPFSTVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVE 103
S+ + +VP F+T+K +V GL G SK EAK+++ VK++ + VD+W ++E
Sbjct: 347 SIAKGWVPNFTTMKSLVTGLAGVSKVSEAKELIGLVKEKFTKN-VDTWKEIE 397
Score = 28.5 bits (62), Expect(2) = 2e-22
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 752 ALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSN 603
ALL + V + F P+ GI P + YN ++A C+ + S+
Sbjct: 150 ALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCESSDSSS 199
>ref|XP_002518506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542351|gb|EEF43893.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 397
Score = 105 bits (261), Expect(2) = 2e-22
Identities = 55/172 (31%), Positives = 97/172 (56%)
Frame = -2
Query: 618 KKSLESARSLLVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLV 439
++ E +L M+ + G+ P ++YNI + + + + + LL M ++ + PN V
Sbjct: 223 EEKYEDVGKVLEMMKDKYGIRPGVSTYNIRIQSLCKLKKSAEAKALLDGMLSRQMKPNSV 282
Query: 438 TYNHKIMKFCKNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEE 259
TY H I FC D G K+L +MV++ +P+ Y L+ DFE+AL +C+E
Sbjct: 283 TYAHLIHGFCNEGDLEG-GKRLFKDMVNRGYQPDSACYFTLLHYLCKGQDFETALRICKE 341
Query: 258 SLERRYVPPFSTVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVE 103
S+ + +VP +T+K +V GL G K DEAK+++ K+K++ + V +W ++E
Sbjct: 342 SIGKDWVPNIATMKSLVNGLAGIGKVDEAKELIAKIKEKFTKN-VSTWEEIE 392
Score = 28.1 bits (61), Expect(2) = 2e-22
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = -3
Query: 749 LLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSN 603
L + Y+ K + V + F P+ I P + +YN +++ C ++ S+
Sbjct: 146 LFACYLAK-DYSEVKRVFLEFPKNYNIEPNLDSYNTVIKSFCDSESSSS 193
>ref|XP_006858124.1| hypothetical protein AMTR_s00062p00111890 [Amborella trichopoda]
gi|548862227|gb|ERN19591.1| hypothetical protein
AMTR_s00062p00111890 [Amborella trichopoda]
Length = 398
Score = 94.7 bits (234), Expect(2) = 1e-21
Identities = 49/164 (29%), Positives = 92/164 (56%)
Frame = -2
Query: 591 LLVKMEKEKGVTPDTTSYNILLGACLENRDETKFSELLQEMENKGLSPNLVTYNHKIMKF 412
+++ + + G P T+YN+ + + + + ++ L++ M +KG+ PN T+ H I F
Sbjct: 232 VVLDLMERNGCHPGVTTYNVRIQSLCKLKKSSEAMALIRGMVSKGVRPNTTTFYHLIYGF 291
Query: 411 CKNKDGAGDAKKLLDEMVSKNIKPNPGMYVGLIRCFVGANDFESALGVCEESLERRYVPP 232
C+ + +AKK+ EM S+ P+ Y L+ D+E A +C ES+E+ +VP
Sbjct: 292 CR-EGNLEEAKKVFSEMKSRGCVPDSNCYFALLYYLCEGGDYEPAFKLCRESMEKDWVPS 350
Query: 231 FSTVKDVVKGLVGNSKRDEAKKIVEKVKKQLRGSAVDSWTKVEE 100
F +K +V GLV SK + AK+I+ ++K++ ++ + W VE+
Sbjct: 351 FKVMKSLVNGLVKLSKIEAAKEIIGEMKEKFPSNS-EMWATVEQ 393
Score = 35.8 bits (81), Expect(2) = 1e-21
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -3
Query: 773 RTEKSLCALLSVYMKKGQFDLVHKSFESVPREIGISPGIAAYNIALRALCKEKNRSNLL 597
RT KSL ALLS + ++ V + F+ ++ I P YN ++ALC+ + + L
Sbjct: 138 RTVKSLNALLSSCIIAKKYKEVARLFDEYSKDYSIKPDTVTYNTMIKALCESDSSDSAL 196