BLASTX nr result
ID: Cocculus22_contig00029011
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00029011
(262 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002533116.1| pentatricopeptide repeat-containing protein,... 88 1e-15
emb|CBI22241.3| unnamed protein product [Vitis vinifera] 85 1e-14
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
ref|XP_004306132.1| PREDICTED: pentatricopeptide repeat-containi... 83 5e-14
ref|XP_006482624.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
ref|XP_006431198.1| hypothetical protein CICLE_v10013587mg, part... 82 6e-14
gb|EXB31946.1| hypothetical protein L484_013578 [Morus notabilis] 82 1e-13
ref|XP_007217362.1| hypothetical protein PRUPE_ppa021574mg [Prun... 82 1e-13
ref|XP_006400048.1| hypothetical protein EUTSA_v10012473mg [Eutr... 80 2e-13
ref|XP_002323869.2| pentatricopeptide repeat-containing family p... 80 3e-13
gb|EEE58395.1| hypothetical protein OsJ_09560 [Oryza sativa Japo... 78 1e-12
gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indi... 78 1e-12
ref|NP_001049090.1| Os03g0168400 [Oryza sativa Japonica Group] g... 78 1e-12
ref|XP_002871658.1| pentatricopeptide repeat-containing protein ... 76 4e-12
ref|XP_006286917.1| hypothetical protein CARUB_v10000061mg [Caps... 75 7e-12
ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_006840156.1| hypothetical protein AMTR_s00089p00070210 [A... 74 2e-11
ref|NP_197032.1| pentatricopeptide repeat-containing protein [Ar... 74 2e-11
ref|XP_007146506.1| hypothetical protein PHAVU_006G046500g [Phas... 73 4e-11
ref|XP_007146505.1| hypothetical protein PHAVU_006G046500g [Phas... 73 4e-11
>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1204
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
+GNGLYL+T++DEYEK + +L D++ PD N LIR CD G+ + AL + ++M GQ+L
Sbjct: 460 IGNGLYLDTNIDEYEKKVSGILKDSMLPDFNLLIREGCDQGNFKAALLLIDEMFRWGQEL 519
Query: 79 SFSAYSELVKGLSFSRSRVMKAIHL 5
S S + LV+GL SRS + IHL
Sbjct: 520 SLSVLAALVRGLCASRSHIRACIHL 544
>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
Length = 1256
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/75 (53%), Positives = 56/75 (74%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
LGNGLYLETD+DEYEK + +L+D++ PD N LI C G+++TA+ V ++MV GQ+L
Sbjct: 522 LGNGLYLETDVDEYEKKVTGILEDSMVPDFNLLITRACAGGNVKTAMMVVDEMVRWGQEL 581
Query: 79 SFSAYSELVKGLSFS 35
S SA+S L++GL S
Sbjct: 582 SLSAFSALLEGLCAS 596
>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15280-like [Vitis vinifera]
Length = 1273
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/75 (53%), Positives = 56/75 (74%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
LGNGLYLETD+DEYEK + +L+D++ PD N LI C G+++TA+ V ++MV GQ+L
Sbjct: 539 LGNGLYLETDVDEYEKKVTGILEDSMVPDFNLLITRACAGGNVKTAMMVVDEMVRWGQEL 598
Query: 79 SFSAYSELVKGLSFS 35
S SA+S L++GL S
Sbjct: 599 SLSAFSALLEGLCAS 613
>ref|XP_004306132.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15280-like [Fragaria vesca subsp. vesca]
Length = 1246
Score = 82.8 bits (203), Expect = 5e-14
Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 7/92 (7%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
LGNGLYL+TDLDEYEK + +L+D + PD +L++ EC G+++ AL + ++M+ GQ L
Sbjct: 508 LGNGLYLDTDLDEYEKRMTRILEDCMVPDYYSLMKKECTRGNLKGALVLADEMIRWGQDL 567
Query: 79 SFSAYSELVKGLSFSR-------SRVMKAIHL 5
S S S+L+KGLS S S V K +HL
Sbjct: 568 SLSMISDLLKGLSASHLHTKEITSIVDKKLHL 599
>ref|XP_006482624.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15280-like [Citrus sinensis]
Length = 1259
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/79 (49%), Positives = 58/79 (73%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
LGNGLYL+TDLDEYE+ L +++D++ P+ N+LI+ G+++ AL + ++MV GQ+L
Sbjct: 533 LGNGLYLDTDLDEYERKLSKIIEDSMIPNFNSLIKMVHARGNLKAALLLVDEMVRWGQEL 592
Query: 79 SFSAYSELVKGLSFSRSRV 23
S S +S LVKGL SRS +
Sbjct: 593 SLSVFSALVKGLCASRSHI 611
>ref|XP_006431198.1| hypothetical protein CICLE_v10013587mg, partial [Citrus clementina]
gi|557533255|gb|ESR44438.1| hypothetical protein
CICLE_v10013587mg, partial [Citrus clementina]
Length = 1231
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/79 (49%), Positives = 58/79 (73%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
LGNGLYL+TDLDEYE+ L +++D++ P+ N+LI+ G+++ AL + ++MV GQ+L
Sbjct: 502 LGNGLYLDTDLDEYERKLSKIIEDSMIPNFNSLIKMVHARGNLKAALLLVDEMVRWGQEL 561
Query: 79 SFSAYSELVKGLSFSRSRV 23
S S +S LVKGL SRS +
Sbjct: 562 SLSVFSALVKGLCASRSHI 580
>gb|EXB31946.1| hypothetical protein L484_013578 [Morus notabilis]
Length = 1087
Score = 81.6 bits (200), Expect = 1e-13
Identities = 35/73 (47%), Positives = 54/73 (73%)
Frame = -1
Query: 262 TLGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQK 83
+LGNGLYL+ D EYEK + +L+D++ PD N+ + ECDHG+++ AL + ++MV+ GQ+
Sbjct: 349 SLGNGLYLDADFTEYEKRVTGILEDSLVPDYNSFVIKECDHGNLKGALILADEMVHWGQE 408
Query: 82 LSFSAYSELVKGL 44
LS +S L+KGL
Sbjct: 409 LSLPVFSVLLKGL 421
>ref|XP_007217362.1| hypothetical protein PRUPE_ppa021574mg [Prunus persica]
gi|462413512|gb|EMJ18561.1| hypothetical protein
PRUPE_ppa021574mg [Prunus persica]
Length = 994
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/79 (50%), Positives = 56/79 (70%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
LGNGLYL+TDLDEYEK + +L+D + PD N+L+ EC G+++ AL + ++MV GQ L
Sbjct: 256 LGNGLYLDTDLDEYEKRVTWILEDCMVPDYNSLMMKECTLGNLKGALMLVDEMVRWGQDL 315
Query: 79 SFSAYSELVKGLSFSRSRV 23
S S +S L+KG S S S +
Sbjct: 316 SSSTFSALMKGFSASPSHI 334
>ref|XP_006400048.1| hypothetical protein EUTSA_v10012473mg [Eutrema salsugineum]
gi|557101138|gb|ESQ41501.1| hypothetical protein
EUTSA_v10012473mg [Eutrema salsugineum]
Length = 1222
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
LGNGLYL+TDLD YE+ + VLD ++ P+ N+LI C+ GD++TAL + ++M GQKL
Sbjct: 502 LGNGLYLDTDLDAYEQRVNMVLDRSVLPEFNSLIVRACNDGDLQTALELLDEMARWGQKL 561
Query: 79 SFSAYSELVKGLSFSRSRVMKAIHL 5
S ++ L+K L SRS V +I +
Sbjct: 562 SRRGFTVLMKSLCASRSHVRVSISI 586
>ref|XP_002323869.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550320105|gb|EEF04002.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 1255
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
LGNGLYL+TDLDEY+K + +L+D++ PD + L+R EC +G+ + A ++ +M GQ+L
Sbjct: 521 LGNGLYLDTDLDEYDKRVAGILEDSMVPDFDFLVRKECSNGNFKVAYSLTGEMARWGQEL 580
Query: 79 SFSAYSELVKGLSFSRSRV 23
S S S L+KGL RS +
Sbjct: 581 SLSVVSALLKGLCTPRSYI 599
>gb|EEE58395.1| hypothetical protein OsJ_09560 [Oryza sativa Japonica Group]
Length = 1276
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/86 (43%), Positives = 60/86 (69%)
Frame = -1
Query: 262 TLGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQK 83
++GNGLYL+TD ++E SL+ ++D A++PD++ + C GDI +AL +K++ G
Sbjct: 549 SVGNGLYLDTDSTKFEASLVQIIDYALYPDISLNLVRACRQGDIASALVLKDETFQWGHD 608
Query: 82 LSFSAYSELVKGLSFSRSRVMKAIHL 5
+S ++YSEL+K LS S +R M AI+L
Sbjct: 609 ISTASYSELLKALSASPARAMDAINL 634
>gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indica Group]
Length = 1276
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/86 (43%), Positives = 60/86 (69%)
Frame = -1
Query: 262 TLGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQK 83
++GNGLYL+TD ++E SL+ ++D A++PD++ + C GDI +AL +K++ G
Sbjct: 549 SVGNGLYLDTDSTKFEASLVQIIDYALYPDISLNLVRACRQGDIASALVLKDETFQWGHD 608
Query: 82 LSFSAYSELVKGLSFSRSRVMKAIHL 5
+S ++YSEL+K LS S +R M AI+L
Sbjct: 609 ISTASYSELLKALSSSPARAMDAINL 634
>ref|NP_001049090.1| Os03g0168400 [Oryza sativa Japonica Group]
gi|19071617|gb|AAL84284.1|AC073556_1 putative
pentatricopeptide repeat containing protein [Oryza
sativa Japonica Group] gi|108706387|gb|ABF94182.1|
pentatricopeptide, putative [Oryza sativa Japonica
Group] gi|113547561|dbj|BAF11004.1| Os03g0168400 [Oryza
sativa Japonica Group]
Length = 1337
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/86 (43%), Positives = 60/86 (69%)
Frame = -1
Query: 262 TLGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQK 83
++GNGLYL+TD ++E SL+ ++D A++PD++ + C GDI +AL +K++ G
Sbjct: 542 SVGNGLYLDTDSTKFEASLVQIIDYALYPDISLNLVRACRQGDIASALVLKDETFQWGHD 601
Query: 82 LSFSAYSELVKGLSFSRSRVMKAIHL 5
+S ++YSEL+K LS S +R M AI+L
Sbjct: 602 ISTASYSELLKALSASPARAMDAINL 627
>ref|XP_002871658.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317495|gb|EFH47917.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1223
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/85 (43%), Positives = 57/85 (67%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
LGNGLYL TDLD YE+ + VLD ++ P+ N+LI C GD++TAL + ++M GQKL
Sbjct: 498 LGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRACKDGDLQTALRLLDEMTRWGQKL 557
Query: 79 SFSAYSELVKGLSFSRSRVMKAIHL 5
S +++ L++ L SR+ + ++ L
Sbjct: 558 SRRSFAVLMRSLCASRAHLRVSVSL 582
>ref|XP_006286917.1| hypothetical protein CARUB_v10000061mg [Capsella rubella]
gi|482555623|gb|EOA19815.1| hypothetical protein
CARUB_v10000061mg [Capsella rubella]
Length = 1230
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/85 (45%), Positives = 54/85 (63%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
LGNGLYL TDLD YE+ L +LD + P+ N LI C GD++TAL + ++M GQKL
Sbjct: 506 LGNGLYLHTDLDAYEQRLNMLLDRSALPEFNLLIVKACKDGDLQTALKLHDEMARWGQKL 565
Query: 79 SFSAYSELVKGLSFSRSRVMKAIHL 5
S +++ L+K L SR V ++ L
Sbjct: 566 SRRSFAVLMKSLCASRFHVKVSVSL 590
>ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15280-like [Glycine max]
Length = 1186
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/79 (41%), Positives = 56/79 (70%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
+GNGLYL+TD+DEY+K + L++++ P+ N+ + EC G+++ AL + E+M+ GQ+L
Sbjct: 456 VGNGLYLDTDVDEYDKHITLDLEESMVPNFNSFVSKECSDGNLKNALVLVEEMLCWGQEL 515
Query: 79 SFSAYSELVKGLSFSRSRV 23
F +S LV+ L SRS++
Sbjct: 516 LFPEFSNLVRQLCSSRSQI 534
>ref|XP_006840156.1| hypothetical protein AMTR_s00089p00070210 [Amborella trichopoda]
gi|548841855|gb|ERN01831.1| hypothetical protein
AMTR_s00089p00070210 [Amborella trichopoda]
Length = 1239
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -1
Query: 262 TLGNGLYLETDLDEYEKSLMSVLDDA-IFPDLNALIRNECDHGDIETALAVKEKMVYRGQ 86
TLGNGLYL+T++ EYE +LM +LD+A +FP+ + I EC G +E AL +K+ MV G
Sbjct: 503 TLGNGLYLDTNIQEYESTLMGILDEAMMFPNFSLSIVRECSVGHLEAALKLKDAMVQMGL 562
Query: 85 KLSFSAYSELVKGL 44
S A+SE+VKGL
Sbjct: 563 SPSAIAWSEIVKGL 576
>ref|NP_197032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180846|sp|Q9LXF4.1|PP384_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g15280 gi|7671497|emb|CAB89338.1| putative protein
[Arabidopsis thaliana] gi|332004760|gb|AED92143.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 1227
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/85 (43%), Positives = 57/85 (67%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
LGNGLYL TDLD YE+ + VLD ++ P+ N+LI + GD++TAL + ++M GQKL
Sbjct: 502 LGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMARWGQKL 561
Query: 79 SFSAYSELVKGLSFSRSRVMKAIHL 5
S +++ L++ L SR+ + +I L
Sbjct: 562 SRRSFAVLMRSLCASRAHLRVSISL 586
>ref|XP_007146506.1| hypothetical protein PHAVU_006G046500g [Phaseolus vulgaris]
gi|561019729|gb|ESW18500.1| hypothetical protein
PHAVU_006G046500g [Phaseolus vulgaris]
Length = 1189
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/85 (40%), Positives = 58/85 (68%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
+GNGLYL+TD+DEYEK + L++++ P+ N+ + EC +G+++ AL + E+M+ GQ+L
Sbjct: 459 VGNGLYLDTDVDEYEKHITLDLEESMVPNFNSFVGKECSNGNLKKALILVEEMLCWGQEL 518
Query: 79 SFSAYSELVKGLSFSRSRVMKAIHL 5
+S+LV+ L SRS+ +L
Sbjct: 519 LLPEFSKLVRQLCSSRSQTTSMTNL 543
>ref|XP_007146505.1| hypothetical protein PHAVU_006G046500g [Phaseolus vulgaris]
gi|561019728|gb|ESW18499.1| hypothetical protein
PHAVU_006G046500g [Phaseolus vulgaris]
Length = 859
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/85 (40%), Positives = 58/85 (68%)
Frame = -1
Query: 259 LGNGLYLETDLDEYEKSLMSVLDDAIFPDLNALIRNECDHGDIETALAVKEKMVYRGQKL 80
+GNGLYL+TD+DEYEK + L++++ P+ N+ + EC +G+++ AL + E+M+ GQ+L
Sbjct: 129 VGNGLYLDTDVDEYEKHITLDLEESMVPNFNSFVGKECSNGNLKKALILVEEMLCWGQEL 188
Query: 79 SFSAYSELVKGLSFSRSRVMKAIHL 5
+S+LV+ L SRS+ +L
Sbjct: 189 LLPEFSKLVRQLCSSRSQTTSMTNL 213