BLASTX nr result
ID: Cocculus22_contig00028944
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00028944
(320 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 84 3e-14
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 83 3e-14
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 83 3e-14
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar... 70 4e-10
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar... 70 4e-10
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar... 68 1e-09
ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Popu... 67 3e-09
ref|XP_003608874.1| hypothetical protein MTR_4g103910 [Medicago ... 66 4e-09
ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Popu... 65 7e-09
ref|XP_006478656.1| PREDICTED: uncharacterized protein LOC102627... 62 1e-07
ref|XP_006405939.1| hypothetical protein EUTSA_v10028029mg [Eutr... 59 7e-07
ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, part... 59 7e-07
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part... 59 9e-07
ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutr... 59 9e-07
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part... 56 4e-06
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = -1
Query: 284 SSNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCTGLLKD*VTS 105
SSNGPWF+ D +P +W +++ E +WID Q+L G T VL+EF R TG L+D S
Sbjct: 793 SSNGPWFTFDDIPSYKWRDRLNEMSAWIDLQMLRSGATTESVLREFATRFTGALRDWFDS 852
Query: 104 LGEYRQL*VVQTPP-HDFIDLLLSWFFGDQA 15
LG YRQL VQ P + +L F GD A
Sbjct: 853 LGPYRQLQFVQLPEVSSALAILHDQFLGDPA 883
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = -1
Query: 293 NIYSSNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCTGLLKD* 114
N SSNGPWF+ D +P +W +++ E +WID Q+L G T VL+EF R TG L+D
Sbjct: 692 NQKSSNGPWFTFDDLPSYKWRDRLNEMSAWIDLQMLRSGATTESVLREFATRFTGALRDW 751
Query: 113 VTSLGEYRQL*VVQTPP-HDFIDLLLSWFFGDQA 15
SLG YRQL VQ P + +L F GD A
Sbjct: 752 FDSLGPYRQLQFVQLPEVSSALAILHDQFLGDPA 785
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = -1
Query: 284 SSNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCTGLLKD*VTS 105
SSNGPWF+ D +P +W +++ E +WID Q+L G T VL+EF R TG L+D S
Sbjct: 806 SSNGPWFTYDDIPSYKWRDRLNEMSAWIDLQMLRSGATTESVLREFATRFTGALRDWFDS 865
Query: 104 LGEYRQL*VVQTPP-HDFIDLLLSWFFGDQA 15
LG YRQL VQ P + +L F GD A
Sbjct: 866 LGPYRQLQFVQLPEVSSALAILHDQFLGDPA 896
>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1645
Score = 69.7 bits (169), Expect = 4e-10
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = -1
Query: 281 SNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCTGLLKD*VTSL 102
+NG WF+LD +P W +++LEFG W+DTQ++ G +++EF R TG LK+ +L
Sbjct: 787 NNGTWFTLDDIPSSLWRKRLLEFGVWLDTQMMKTGADTYKIIEEFCCRMTGTLKEWYHNL 846
Query: 101 GEYRQ 87
G ++Q
Sbjct: 847 GSFKQ 851
>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1951
Score = 69.7 bits (169), Expect = 4e-10
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = -1
Query: 281 SNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCTGLLKD*VTSL 102
++GPWF+LD +P W +++LEFG+W+DTQ++ G +++EF R TG LK+ +L
Sbjct: 807 NSGPWFTLDDIPPSLWRKRLLEFGAWLDTQMMKTGADTYKIIEEFCCRMTGTLKEWYHNL 866
Query: 101 GEYRQ 87
G +Q
Sbjct: 867 GPLKQ 871
>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1170
Score = 68.2 bits (165), Expect = 1e-09
Identities = 26/62 (41%), Positives = 42/62 (67%)
Frame = -1
Query: 272 PWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCTGLLKD*VTSLGEY 93
PWF+LD +P W +++LEFG+W+DTQ++ G ++++EF R TG LK+ +LG
Sbjct: 250 PWFTLDDIPPSMWRKRLLEFGAWLDTQMMKTGADTYNIIEEFCCRMTGTLKEWYHNLGPL 309
Query: 92 RQ 87
+Q
Sbjct: 310 KQ 311
>ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Populus trichocarpa]
gi|550326181|gb|ERP54440.1| hypothetical protein
POPTR_0012s01890g [Populus trichocarpa]
Length = 1153
Score = 67.0 bits (162), Expect = 3e-09
Identities = 31/67 (46%), Positives = 46/67 (68%)
Frame = -1
Query: 284 SSNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCTGLLKD*VTS 105
SS G +F+LD +P +W ++ILEF SW+ + +L G T RD LQ+F A+ +G L D +
Sbjct: 360 SSIGGYFTLDDIPRVKWQDRILEFHSWLTSYMLKDGATLRDALQQFSAKFSGTLWDWFHA 419
Query: 104 LGEYRQL 84
LG+YRQ+
Sbjct: 420 LGDYRQM 426
>ref|XP_003608874.1| hypothetical protein MTR_4g103910 [Medicago truncatula]
gi|355509929|gb|AES91071.1| hypothetical protein
MTR_4g103910 [Medicago truncatula]
Length = 160
Score = 66.2 bits (160), Expect = 4e-09
Identities = 26/66 (39%), Positives = 45/66 (68%)
Frame = -1
Query: 284 SSNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCTGLLKD*VTS 105
+++GPWF+LD +P ++W + +LEFG+W+DT L+ + +++EF R TG LK +
Sbjct: 64 TNSGPWFTLDDIPPNRWRKGLLEFGAWLDTHLMKTDVDSYKIIEEFCCRMTGTLKKWYHN 123
Query: 104 LGEYRQ 87
LG ++Q
Sbjct: 124 LGTFKQ 129
>ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Populus trichocarpa]
gi|222860472|gb|EEE98019.1| hypothetical protein
POPTR_0011s07150g [Populus trichocarpa]
Length = 950
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = -1
Query: 281 SNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCTGLLKD*VTSL 102
S G +F+LD +P +W ++ILEF SW+ + +L G T RD LQ+F A+ +G L D +L
Sbjct: 670 SIGGYFTLDDIPQVKWRDRILEFHSWLTSYMLKDGATLRDALQQFSAKFSGTLWDWFHAL 729
Query: 101 GEYRQL 84
G+YRQ+
Sbjct: 730 GDYRQM 735
>ref|XP_006478656.1| PREDICTED: uncharacterized protein LOC102627079 [Citrus sinensis]
Length = 628
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = -1
Query: 281 SNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCTGLLKD 117
SNGPWF+ D + +W + EF +WID Q+L G T++ VL+EF +R TG L+D
Sbjct: 44 SNGPWFTFDDILKVKWQVRFQEFSAWIDVQMLRTGATSQKVLKEFSSRFTGSLRD 98
>ref|XP_006405939.1| hypothetical protein EUTSA_v10028029mg [Eutrema salsugineum]
gi|557107077|gb|ESQ47392.1| hypothetical protein
EUTSA_v10028029mg [Eutrema salsugineum]
Length = 1145
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/87 (35%), Positives = 47/87 (54%)
Frame = -1
Query: 311 HADIHNNIYSSNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCT 132
H D H+ FS D VP +W +KI E +W+ QLL+PG T V+ + +++
Sbjct: 582 HTDSHSG--------FSFDNVPPSKWRDKIYEMHAWLTEQLLNPGATLPTVIDKIISKFH 633
Query: 131 GLLKD*VTSLGEYRQL*VVQTPPHDFI 51
G L+ SLG+YRQL + Q+ D +
Sbjct: 634 GRLRQWWISLGDYRQLQIRQSQSVDTV 660
>ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, partial [Eutrema
salsugineum] gi|557104186|gb|ESQ44532.1| hypothetical
protein EUTSA_v10003477mg, partial [Eutrema salsugineum]
Length = 751
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = -1
Query: 311 HADIHNNIYSSNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCT 132
H D H+ FS D VP +W +KI E +W+ QLL+PG T V+ + +++
Sbjct: 460 HTDSHSG--------FSFDNVPPSKWRDKIYEMLAWLTEQLLNPGATLPTVIDKLISKFH 511
Query: 131 GLLKD*VTSLGEYRQL*VVQTPPHDFI 51
G L+ TSLG+YR+L + Q+ D +
Sbjct: 512 GRLRQWWTSLGDYRELQIRQSHSVDTV 538
>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema
salsugineum] gi|557110784|gb|ESQ51075.1| hypothetical
protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
Length = 1101
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/87 (35%), Positives = 47/87 (54%)
Frame = -1
Query: 311 HADIHNNIYSSNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCT 132
H D H+ FS D VP +W +KI E +W+ QLL+PG T V+ + +++
Sbjct: 315 HTDSHSG--------FSFDNVPPSKWRDKIYEMHAWLTEQLLNPGDTLPTVIDKLISKFH 366
Query: 131 GLLKD*VTSLGEYRQL*VVQTPPHDFI 51
G L+ SLG+YRQL + Q+ D +
Sbjct: 367 GRLRQWWISLGDYRQLQIRQSQSVDTV 393
>ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutrema salsugineum]
gi|557107078|gb|ESQ47393.1| hypothetical protein
EUTSA_v10028344mg [Eutrema salsugineum]
Length = 1508
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/72 (38%), Positives = 43/72 (59%)
Frame = -1
Query: 266 FSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCTGLLKD*VTSLGEYRQ 87
FS D VP +W +KI E +W+ QLL+PG T V+ + +++ G L+ SLG+YRQ
Sbjct: 298 FSFDNVPPSKWRDKIYEMHAWLTEQLLNPGATLPTVIDKLISKFQGRLRQWWISLGDYRQ 357
Query: 86 L*VVQTPPHDFI 51
L + Q+ D +
Sbjct: 358 LHIRQSQSVDTV 369
>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema
salsugineum] gi|557090298|gb|ESQ31006.1| hypothetical
protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
Length = 1904
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = -1
Query: 311 HADIHNNIYSSNGPWFSLDQVPIDQWHEKILEFGSWIDTQLLHPGRTARDVLQEFLARCT 132
H D H+ + S D VP +W +KI E +W+ QLL+PG T V+ + +++
Sbjct: 686 HTDSHSGL--------SFDNVPSSKWGDKIYEMHAWLTEQLLNPGATLPTVIVKLISKFH 737
Query: 131 GLLKD*VTSLGEYRQL*VVQTPPHD-FIDLLLSWFFG 24
G L+ SLG+YRQL + Q+ D I + + FFG
Sbjct: 738 GHLRQWWISLGDYRQLQIRQSQSVDTVIGHIHNEFFG 774