BLASTX nr result

ID: Cocculus22_contig00028882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00028882
         (386 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006428370.1| hypothetical protein CICLE_v10013723mg, part...    79   7e-13
ref|XP_007203536.1| hypothetical protein PRUPE_ppa027173mg [Prun...    62   1e-07
gb|AEJ72555.1| putative retroelement polyprotein [Malus domestica]     60   3e-07

>ref|XP_006428370.1| hypothetical protein CICLE_v10013723mg, partial [Citrus clementina]
           gi|557530427|gb|ESR41610.1| hypothetical protein
           CICLE_v10013723mg, partial [Citrus clementina]
          Length = 291

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 39/63 (61%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = +1

Query: 199 PSWNLSLAFLNGLNYVSWSRPMTFSLGGKKKLGSIN-RYFCLDASDSKYEDWVAIDQLVC 375
           PS  LS   LNGLNYV WSR +T SLGGK+KLG  N    C D+ D KYEDW+A DQLV 
Sbjct: 8   PSLKLSSVALNGLNYVPWSRAVTLSLGGKRKLGYTNGNSVCPDSKDPKYEDWIANDQLVR 67

Query: 376 SWL 384
           SW+
Sbjct: 68  SWI 70


>ref|XP_007203536.1| hypothetical protein PRUPE_ppa027173mg [Prunus persica]
           gi|462399067|gb|EMJ04735.1| hypothetical protein
           PRUPE_ppa027173mg [Prunus persica]
          Length = 136

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +1

Query: 181 TQKKNTPSWNLSLAFLNGLNYVSWSRPMTFSLGGKKKLGSIN-RYFCLDASDSKYEDWVA 357
           ++ +  P+  L    L G NY+ WSR +T +LGGK KL  IN +    D  D K+E+W++
Sbjct: 20  SESEANPNMKLCSVLLTGFNYIPWSRAVTLALGGKSKLEYINGKIPAPDDGDPKFEEWLS 79

Query: 358 IDQLVCSWL 384
            DQLV SW+
Sbjct: 80  KDQLVMSWI 88


>gb|AEJ72555.1| putative retroelement polyprotein [Malus domestica]
          Length = 1249

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
 Frame = +1

Query: 181 TQKKNTPSWNLSLAFLNGLNYVSWSRPMTFSLGGKKKLGSINRYFC-LDASDSKYEDWVA 357
           ++    P+  L    L   NY+ WSR +T +LGG+ KLG IN      +  DSKYE+W  
Sbjct: 23  SEADGNPNQRLCSILLTEFNYLPWSRAITLALGGRSKLGFINGTIVPPEVGDSKYEEWFC 82

Query: 358 IDQLVCSWL 384
            DQLV SWL
Sbjct: 83  KDQLVMSWL 91


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