BLASTX nr result
ID: Cocculus22_contig00028847
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00028847
(695 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632479.1| PREDICTED: putative uncharacterized protein ... 130 4e-28
emb|CBI33150.3| unnamed protein product [Vitis vinifera] 130 4e-28
ref|XP_004236704.1| PREDICTED: putative uncharacterized protein ... 120 6e-25
ref|XP_006426318.1| hypothetical protein CICLE_v10024688mg [Citr... 119 1e-24
ref|XP_006465847.1| PREDICTED: putative uncharacterized protein ... 117 3e-24
ref|XP_006346743.1| PREDICTED: putative uncharacterized protein ... 116 8e-24
ref|XP_007047850.1| Helicase domain-containing protein / IBR dom... 109 8e-22
ref|XP_007047849.1| Helicase domain-containing protein / IBR dom... 109 8e-22
gb|EYU30966.1| hypothetical protein MIMGU_mgv1a000119mg [Mimulus... 102 2e-19
gb|EXC74203.1| hypothetical protein L484_000308 [Morus notabilis] 100 4e-19
gb|EXC09711.1| hypothetical protein L484_019808 [Morus notabilis] 100 4e-19
ref|XP_006855799.1| hypothetical protein AMTR_s00044p00219890 [A... 99 1e-18
ref|XP_004137287.1| PREDICTED: putative uncharacterized protein ... 95 3e-17
ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA h... 94 4e-17
ref|XP_003552808.1| PREDICTED: putative uncharacterized protein ... 89 1e-15
ref|XP_006353197.1| PREDICTED: putative uncharacterized protein ... 86 9e-15
ref|XP_004250516.1| PREDICTED: putative uncharacterized protein ... 86 9e-15
ref|XP_004502400.1| PREDICTED: putative uncharacterized protein ... 86 2e-14
ref|XP_004289298.1| PREDICTED: putative uncharacterized protein ... 84 3e-14
ref|NP_567206.1| zinc finger-related and helicase and IBR domain... 83 1e-13
>ref|XP_003632479.1| PREDICTED: putative uncharacterized protein At4g01020,
chloroplastic-like [Vitis vinifera]
Length = 1686
Score = 130 bits (327), Expect = 4e-28
Identities = 76/218 (34%), Positives = 123/218 (56%), Gaps = 13/218 (5%)
Frame = -3
Query: 618 GPHTYRRGFQGPSHRRDGNSADFRPVRA---------PKYGNSNLPGD----FSRQPPQF 478
GP TYRR + RR + + R VR P NL + F PP F
Sbjct: 6 GPATYRRHGPPANPRRAFSPGNIRSVRPQFEERGDEFPSNCRQNLRPEVAPPFHPSPPNF 65
Query: 477 VLELRRGRQGSDKTQLERLIADYVSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLVWRR 298
++ELR G G K ++ L+A EK+ V +G +AA LFF+QW D L+ +V +W
Sbjct: 66 IIELRPGLGGFKKIDVDELLATCKLMPEKVTVLSSGPIAATLFFRQWVDTLETMVYLWEL 125
Query: 297 RLCGEHLLNPHVVFTGAVVQSDKDEMVERLKALFKDHIRGLIEGEAVKRWVKKIETVSNE 118
RL G+HL P ++ ++ SD+DE+ RL+ F +HIR ++EGE VK+W +++ +S+E
Sbjct: 126 RLEGKHLFTPKLI-RNIIMPSDEDELRSRLQTTFGNHIRAILEGEEVKKWQNELQHLSDE 184
Query: 117 IAQIKVQLKSRRKPQSALELMAKSEGLVAERELMLKRV 4
IA+++ L+ K + +L ++ +GL+ +R+L+ KR+
Sbjct: 185 IAKVQGLLRKPNKIAAHEKLTSEKKGLLCDRDLISKRL 222
>emb|CBI33150.3| unnamed protein product [Vitis vinifera]
Length = 1988
Score = 130 bits (327), Expect = 4e-28
Identities = 76/218 (34%), Positives = 123/218 (56%), Gaps = 13/218 (5%)
Frame = -3
Query: 618 GPHTYRRGFQGPSHRRDGNSADFRPVRA---------PKYGNSNLPGD----FSRQPPQF 478
GP TYRR + RR + + R VR P NL + F PP F
Sbjct: 6 GPATYRRHGPPANPRRAFSPGNIRSVRPQFEERGDEFPSNCRQNLRPEVAPPFHPSPPNF 65
Query: 477 VLELRRGRQGSDKTQLERLIADYVSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLVWRR 298
++ELR G G K ++ L+A EK+ V +G +AA LFF+QW D L+ +V +W
Sbjct: 66 IIELRPGLGGFKKIDVDELLATCKLMPEKVTVLSSGPIAATLFFRQWVDTLETMVYLWEL 125
Query: 297 RLCGEHLLNPHVVFTGAVVQSDKDEMVERLKALFKDHIRGLIEGEAVKRWVKKIETVSNE 118
RL G+HL P ++ ++ SD+DE+ RL+ F +HIR ++EGE VK+W +++ +S+E
Sbjct: 126 RLEGKHLFTPKLI-RNIIMPSDEDELRSRLQTTFGNHIRAILEGEEVKKWQNELQHLSDE 184
Query: 117 IAQIKVQLKSRRKPQSALELMAKSEGLVAERELMLKRV 4
IA+++ L+ K + +L ++ +GL+ +R+L+ KR+
Sbjct: 185 IAKVQGLLRKPNKIAAHEKLTSEKKGLLCDRDLISKRL 222
>ref|XP_004236704.1| PREDICTED: putative uncharacterized protein At4g01020,
chloroplastic-like [Solanum lycopersicum]
Length = 1730
Score = 120 bits (300), Expect = 6e-25
Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 6/208 (2%)
Frame = -3
Query: 609 TYRRGFQGPS--HRRDGNSADFRPVRAPKYGNS---NLPGDFSRQPPQFVLELRRGRQGS 445
+Y R F P+ H+ S+ RP R Y +S + P S + P FV++LR G +
Sbjct: 6 SYNRRFPAPAMYHQHCYRSSSNRPCRPGFYSSSYELDRPPGHSHKSPNFVIQLRYGNRRI 65
Query: 444 DKTQLERLIADYVSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLVWRRRLCGEHLLNPH 265
++ L+ LI V+ GFL+ L + QWS+ L+ IV +WR RL G H P
Sbjct: 66 NRYGLDDLIEKLPFAPRSSFVFSKGFLSGSLLYDQWSETLEVIVKLWRMRLSGSHSFTPW 125
Query: 264 VVFTGAVVQSDKDEMVERLKALFKDHIRG-LIEGEAVKRWVKKIETVSNEIAQIKVQLKS 88
V V SD+DE+ R+K +F + ++G L+EGE +++W KK+E + +EI ++ LK+
Sbjct: 126 VK-RNVEVPSDEDELKGRVKMVFLEELKGLLVEGELLQKWEKKLELLRDEICELSRLLKN 184
Query: 87 RRKPQSALELMAKSEGLVAERELMLKRV 4
R + E + K EGL E +L+ KR+
Sbjct: 185 RNNLRVCNEFLKKREGLEKESDLIRKRI 212
>ref|XP_006426318.1| hypothetical protein CICLE_v10024688mg [Citrus clementina]
gi|557528308|gb|ESR39558.1| hypothetical protein
CICLE_v10024688mg [Citrus clementina]
Length = 1730
Score = 119 bits (297), Expect = 1e-24
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = -3
Query: 486 PQFVLELRRGRQGSDKTQLERLIADYVSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLV 307
P F+++LR +L+ L++ CE + V +G L A L+F QW D L+A+V +
Sbjct: 47 PNFIIQLRSSTPAISGQELKALLSKLSLSCEHVAVSPSGPLIASLYFNQWVDTLNAMVGL 106
Query: 306 WRRRLCGEHLLN----PHVVFTGAVVQSDKDEMVERLKALFKDHIRGLIEGEAVKRWVKK 139
W RL G H LN PHVV V SD DE+ ERL+ LF DH++GL+EGE V +W+K
Sbjct: 107 WESRLNGAHCLNLKLIPHVV-----VPSDADELEERLRNLFVDHVKGLMEGELVNKWLKM 161
Query: 138 IETVSNEIAQIKVQLKSRRKPQSALELMAKSEGLVAERELMLKRV 4
+ +EIA + +L SR EL + +GL ERE++++RV
Sbjct: 162 KDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRV 206
>ref|XP_006465847.1| PREDICTED: putative uncharacterized protein At4g01020,
chloroplastic-like [Citrus sinensis]
gi|568823753|ref|XP_006466273.1| PREDICTED: putative
uncharacterized protein At4g01020, chloroplastic-like
[Citrus sinensis] gi|568885200|ref|XP_006495187.1|
PREDICTED: putative uncharacterized protein At4g01020,
chloroplastic-like [Citrus sinensis]
Length = 1730
Score = 117 bits (294), Expect = 3e-24
Identities = 65/165 (39%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = -3
Query: 486 PQFVLELRRGRQGSDKTQLERLIADYVSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLV 307
P F+++LR +L+ L++ CE + V +G L A L+F QW D L+A+V +
Sbjct: 47 PNFIIQLRSSTPAISGQELKALLSKLSLSCEDVAVSPSGPLIASLYFNQWVDTLNAMVGL 106
Query: 306 WRRRLCGEHLLN----PHVVFTGAVVQSDKDEMVERLKALFKDHIRGLIEGEAVKRWVKK 139
W RL G H LN PHVV V SD DE+ ERL+ LF DH++GL+EGE V +W+K
Sbjct: 107 WESRLNGAHCLNLKLIPHVV-----VPSDADELEERLRNLFVDHVKGLMEGELVNKWLKM 161
Query: 138 IETVSNEIAQIKVQLKSRRKPQSALELMAKSEGLVAERELMLKRV 4
+ +EI+ + +L SR EL + +GL ERE++++RV
Sbjct: 162 KDDKCDEISNVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRRV 206
>ref|XP_006346743.1| PREDICTED: putative uncharacterized protein At4g01020,
chloroplastic-like [Solanum tuberosum]
Length = 1729
Score = 116 bits (290), Expect = 8e-24
Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Frame = -3
Query: 579 HRRDGNSADFRPVRAPKYGNS---NLPGDFSRQPPQFVLELRRGRQGSDKTQLERLIADY 409
H ++ RP R Y +S + P S + P FV++LR G + ++ L+ LI
Sbjct: 18 HEHSYRLSNNRPCRPGYYSSSYELDRPPGHSHKSPNFVIQLRSGNRRINRYALDDLIEKL 77
Query: 408 VSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLVWRRRLCGEHLLNPHVVFTGAVVQSDK 229
V+ GFL+ L + QWS+ L+ IV +WR RL G H P V V SD+
Sbjct: 78 PFAPRSSFVFSKGFLSGSLMYDQWSETLEVIVKLWRMRLSGSHSFTPWVK-RNVEVPSDE 136
Query: 228 DEMVERLKALFKDHIRG-LIEGEAVKRWVKKIETVSNEIAQIKVQLKSRRKPQSALELMA 52
DE+ R+K +F + ++G L+EGE +++W KK+E + +EI ++ LK+R + E +
Sbjct: 137 DELKARVKMVFLEELKGLLVEGELLQKWEKKLELLRDEICELSRLLKNRNNLRVCNEFLK 196
Query: 51 KSEGLVAERELMLKRV 4
K EGL E +L+ KR+
Sbjct: 197 KREGLEKESDLIRKRI 212
>ref|XP_007047850.1| Helicase domain-containing protein / IBR domain-containing protein
/ zinc finger protein-related, putative isoform 2
[Theobroma cacao] gi|508700111|gb|EOX92007.1| Helicase
domain-containing protein / IBR domain-containing
protein / zinc finger protein-related, putative isoform
2 [Theobroma cacao]
Length = 1359
Score = 109 bits (273), Expect = 8e-22
Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 9/213 (4%)
Frame = -3
Query: 615 PHTYRRGFQGPSHRRDGNSADFRPVRAPK-----YGNSNLPGDFSRQPPQFVLELRRGRQ 451
PH Y+ Q + + N+ RP P+ NSN+ G P F + L
Sbjct: 28 PHNYQSNHQPGPNFQPVNNQYRRPYAPPRPTAVASTNSNILGR-----PNFTILLLVDSS 82
Query: 450 GSDKTQ---LERLIADYVSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLVWRRRLCGEH 280
S + L+ LI+ E ++ TG AA LFF++W L +I+ +WR RL G H
Sbjct: 83 SSSPAKPNDLQTLISQLNPAPENSRIHPTGKTAASLFFREWIHTLSSILSLWRSRLDGSH 142
Query: 279 LLNPHVVFTGAVVQSDKDEMVERLKALFKDHIRGLIEGEAVKRWVKKIETVSNEIAQIKV 100
P+++ V SD E+ + LK LF +HI+GL+EGE VK+W +KIE S+EIA +
Sbjct: 143 HFTPNLI-CNVRVASDMVELKQNLKTLFSNHIKGLMEGELVKKWKEKIEEKSDEIADVAA 201
Query: 99 QLKSRRKPQSA-LELMAKSEGLVAERELMLKRV 4
Q R + EL K +GL+AER ++ KR+
Sbjct: 202 QTGKRHCSRGRFFELNDKKKGLMAERSMISKRL 234
>ref|XP_007047849.1| Helicase domain-containing protein / IBR domain-containing protein
/ zinc finger protein-related, putative isoform 1
[Theobroma cacao] gi|508700110|gb|EOX92006.1| Helicase
domain-containing protein / IBR domain-containing
protein / zinc finger protein-related, putative isoform
1 [Theobroma cacao]
Length = 1758
Score = 109 bits (273), Expect = 8e-22
Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 9/213 (4%)
Frame = -3
Query: 615 PHTYRRGFQGPSHRRDGNSADFRPVRAPK-----YGNSNLPGDFSRQPPQFVLELRRGRQ 451
PH Y+ Q + + N+ RP P+ NSN+ G P F + L
Sbjct: 28 PHNYQSNHQPGPNFQPVNNQYRRPYAPPRPTAVASTNSNILGR-----PNFTILLLVDSS 82
Query: 450 GSDKTQ---LERLIADYVSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLVWRRRLCGEH 280
S + L+ LI+ E ++ TG AA LFF++W L +I+ +WR RL G H
Sbjct: 83 SSSPAKPNDLQTLISQLNPAPENSRIHPTGKTAASLFFREWIHTLSSILSLWRSRLDGSH 142
Query: 279 LLNPHVVFTGAVVQSDKDEMVERLKALFKDHIRGLIEGEAVKRWVKKIETVSNEIAQIKV 100
P+++ V SD E+ + LK LF +HI+GL+EGE VK+W +KIE S+EIA +
Sbjct: 143 HFTPNLI-CNVRVASDMVELKQNLKTLFSNHIKGLMEGELVKKWKEKIEEKSDEIADVAA 201
Query: 99 QLKSRRKPQSA-LELMAKSEGLVAERELMLKRV 4
Q R + EL K +GL+AER ++ KR+
Sbjct: 202 QTGKRHCSRGRFFELNDKKKGLMAERSMISKRL 234
>gb|EYU30966.1| hypothetical protein MIMGU_mgv1a000119mg [Mimulus guttatus]
Length = 1734
Score = 102 bits (253), Expect = 2e-19
Identities = 68/201 (33%), Positives = 109/201 (54%), Gaps = 4/201 (1%)
Frame = -3
Query: 594 FQGPSHRRDGNSAD-FRPVRAPKYGNSNLPGDFSRQP--PQFVLELRRGRQGSDKTQLER 424
+QGP RR N + FRP +P + R P P F++++ Q + K
Sbjct: 33 YQGPPFRRPPNQQNRFRPAFSPHQRD--------RPPARPNFIVQVHSDAQSAVKAFRP- 83
Query: 423 LIADYVSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLVWRRRLCGE-HLLNPHVVFTGA 247
+K V + ++A KL ++QWS+ L+ +V +W +L + H PHVV +
Sbjct: 84 ---------QKSDVVASNYIAGKLHYEQWSETLETVVQLWELKLNEDGHKFWPHVV-SNV 133
Query: 246 VVQSDKDEMVERLKALFKDHIRGLIEGEAVKRWVKKIETVSNEIAQIKVQLKSRRKPQSA 67
V SDK E+ +RLK LF + ++GL EG+ V++W+KK+ V NEI ++ +LK ++
Sbjct: 134 EVPSDKSELNDRLKELFLEKLKGLKEGDLVEKWLKKLGNVVNEINRVSDKLKKPQRLGVV 193
Query: 66 LELMAKSEGLVAERELMLKRV 4
E + K +GL AER+L+L RV
Sbjct: 194 DEQLRKRKGLQAERDLILNRV 214
>gb|EXC74203.1| hypothetical protein L484_000308 [Morus notabilis]
Length = 293
Score = 100 bits (250), Expect = 4e-19
Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 1/193 (0%)
Frame = -3
Query: 579 HRRDGNSADFRPVRAPKYGNSNLPGDFSRQPPQFVLELRRGRQGSDKTQLERLIADYV-S 403
HRR ++ RP ++ + P P F++EL R ++G + +AD S
Sbjct: 19 HRRFYPPSNSRPFPNNRHNFAGNPHRHRPSLPDFMVELFRDQRGGGPVPDVKALADQCKS 78
Query: 402 PCEKLLVYQTGFLAAKLFFKQWSDALDAIVLVWRRRLCGEHLLNPHVVFTGAVVQSDKDE 223
E Y++G L L F+QW+ AL+A+V +W RL G H L P VV ++ E
Sbjct: 79 APESFKTYRSGALTGALLFRQWAGALEAVVSLWESRLDGAHSLVPRYNSV-VVVPANLQE 137
Query: 222 MVERLKALFKDHIRGLIEGEAVKRWVKKIETVSNEIAQIKVQLKSRRKPQSALELMAKSE 43
+ +RL ALF + IR L+EGE VK+W +K + V E+ ++ L + + EL K
Sbjct: 138 LEDRLVALFAERIRRLMEGEEVKKWNEKRDRVLVELGKVSKLLTKPKNVRVFNELKDKER 197
Query: 42 GLVAERELMLKRV 4
GL E++LM +RV
Sbjct: 198 GLTCEKDLMERRV 210
>gb|EXC09711.1| hypothetical protein L484_019808 [Morus notabilis]
Length = 1733
Score = 100 bits (250), Expect = 4e-19
Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 1/193 (0%)
Frame = -3
Query: 579 HRRDGNSADFRPVRAPKYGNSNLPGDFSRQPPQFVLELRRGRQGSDKTQLERLIADYV-S 403
HRR ++ RP ++ + P P F++EL R ++G + +AD S
Sbjct: 19 HRRFYPPSNSRPFPNNRHNFAGNPHRHRPSLPDFMVELFRDQRGGGPVPDVKALADQCKS 78
Query: 402 PCEKLLVYQTGFLAAKLFFKQWSDALDAIVLVWRRRLCGEHLLNPHVVFTGAVVQSDKDE 223
E Y++G L L F+QW+ AL+A+V +W RL G H L P VV ++ E
Sbjct: 79 APESFKTYRSGALTGALLFRQWAGALEAVVSLWESRLDGAHSLVPRYNSV-VVVPANLQE 137
Query: 222 MVERLKALFKDHIRGLIEGEAVKRWVKKIETVSNEIAQIKVQLKSRRKPQSALELMAKSE 43
+ +RL ALF + IR L+EGE VK+W +K + V E+ ++ L + + EL K
Sbjct: 138 LEDRLVALFAERIRRLMEGEEVKKWNEKRDRVLVELGKVSKLLTKPKNVRVFNELKDKER 197
Query: 42 GLVAERELMLKRV 4
GL E++LM +RV
Sbjct: 198 GLTCEKDLMERRV 210
>ref|XP_006855799.1| hypothetical protein AMTR_s00044p00219890 [Amborella trichopoda]
gi|548859586|gb|ERN17266.1| hypothetical protein
AMTR_s00044p00219890 [Amborella trichopoda]
Length = 1703
Score = 99.4 bits (246), Expect = 1e-18
Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 3/167 (1%)
Frame = -3
Query: 495 RQPPQFVLELRRGRQGSDKTQLERLIADYVSPC---EKLLVYQTGFLAAKLFFKQWSDAL 325
R P F +EL + K L I++ + C + ++ G + A+L + QW DAL
Sbjct: 12 RAGPNFEVELWVVK----KRMLSWNISELIRSCPHADSHEIFSPGLVVARLSYSQWVDAL 67
Query: 324 DAIVLVWRRRLCGEHLLNPHVVFTGAVVQSDKDEMVERLKALFKDHIRGLIEGEAVKRWV 145
+A++ +W RL G H +P T VV SD++E+ +RL+ LF H++ L+ GEA++R
Sbjct: 68 EAMIALWESRLDGAHYFSPRFK-TRVVVPSDQNELTDRLRTLFAVHVQCLLRGEALERCK 126
Query: 144 KKIETVSNEIAQIKVQLKSRRKPQSALELMAKSEGLVAERELMLKRV 4
+K+ET+ E+ + LKS + E+ K EGL++ER L+ KR+
Sbjct: 127 QKLETIDMELRNVVSLLKSSNPLKKYYEINGKKEGLISERRLVEKRI 173
>ref|XP_004137287.1| PREDICTED: putative uncharacterized protein At4g01020,
chloroplastic-like [Cucumis sativus]
Length = 1735
Score = 94.7 bits (234), Expect = 3e-17
Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 5/177 (2%)
Frame = -3
Query: 519 SNLPGDFSRQP-----PQFVLELRRGRQGSDKTQLERLIADYVSPCEKLLVYQTGFLAAK 355
S+ P FS Q F ++L + K +E LIA +S + ++ Q G +AA
Sbjct: 35 SDFPSKFSAQQNCPNRANFAIDLVLEHRTLSKCSVELLIAKCISKPDNYIIPQVGSVAAF 94
Query: 354 LFFKQWSDALDAIVLVWRRRLCGEHLLNPHVVFTGAVVQSDKDEMVERLKALFKDHIRGL 175
LFFKQW AL+ +V +W RL G H P ++ + SD DE+ ERL+ LF + I+ L
Sbjct: 95 LFFKQWVSALEYMVALWELRLTGFHDFTP-ILKPRINLPSDVDELHERLQNLFAERIKLL 153
Query: 174 IEGEAVKRWVKKIETVSNEIAQIKVQLKSRRKPQSALELMAKSEGLVAERELMLKRV 4
++G+ V+ W K + V +I +I L+ + +A +L K +GL+ E+E +++++
Sbjct: 154 MDGDKVRHWQNKYDLVMVQINRISDTLRRPLRIDAAFKLNEKKKGLLVEKESIVRKM 210
>ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein
[Medicago truncatula] gi|355490965|gb|AES72168.1|
Pre-mRNA splicing factor ATP-dependent RNA helicase-like
protein [Medicago truncatula]
Length = 1718
Score = 94.0 bits (232), Expect = 4e-17
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 1/193 (0%)
Frame = -3
Query: 579 HRRDGNSADFRPVRAPKYGNSNLPGDFSRQPPQFVLELRRGRQGSDKTQLERLIADYVSP 400
HRR G ++ R R P+ N P +PP F+L+L GR+ ++ ++ LI
Sbjct: 27 HRRPGFYSNHRFDRPPE---RNPP----HRPPNFILKLHLGRRALNRDDVDSLIGKCKPN 79
Query: 399 CEKLLVYQTGFLAAKLFFKQWSDALDAIVLVWRRRLCGEHLLNPHVVFTGAVVQSDKDEM 220
+ Y +AA L F QW+DA DA+V W R+ G H P ++ + +V SD E+
Sbjct: 80 PDNYCFYPCDGVAASLNFLQWTDARDAVVWFWESRISGGHDFTPELI-SNVMVPSDTVEL 138
Query: 219 VERLKALFKDHIRGLIEGEAVKRWVKKIETVSNEIAQIKVQLKSRRKPQSALEL-MAKSE 43
L+ +F H++ L+EG+ VK+WV++ + VS EI+++ V L + P E + +
Sbjct: 139 EGSLRRVFASHVKELMEGKEVKKWVEEWDRVSKEISRV-VSLLGKPFPIRVQEQNIQMKK 197
Query: 42 GLVAERELMLKRV 4
GL E+ L+ +R+
Sbjct: 198 GLDEEKSLIERRL 210
>ref|XP_003552808.1| PREDICTED: putative uncharacterized protein At4g01020,
chloroplastic-like [Glycine max]
Length = 1729
Score = 89.4 bits (220), Expect = 1e-15
Identities = 54/161 (33%), Positives = 85/161 (52%)
Frame = -3
Query: 486 PQFVLELRRGRQGSDKTQLERLIADYVSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLV 307
P F +ELR G + +E LI + S + Y +AA L ++ W A DA+V
Sbjct: 58 PYFRVELRLGSSPLHRDDVEALIDECHSRHDTFTFYPVDDVAAVLSYRSWEQARDAVVWF 117
Query: 306 WRRRLCGEHLLNPHVVFTGAVVQSDKDEMVERLKALFKDHIRGLIEGEAVKRWVKKIETV 127
W RL +H P + VV+ D D RL+ +F H++GL EG+ VKRW+++ E +
Sbjct: 118 WEARLAEKHDFTPTLDSNVVVVKDDVDC---RLRPVFARHVKGLTEGKEVKRWMEESERL 174
Query: 126 SNEIAQIKVQLKSRRKPQSALELMAKSEGLVAERELMLKRV 4
S EI+++ L + EL+ K +GLV E+ L+ +R+
Sbjct: 175 SKEISRLSSSLSKPLRLGVHNELVEKKKGLVDEKNLVERRL 215
>ref|XP_006353197.1| PREDICTED: putative uncharacterized protein At4g01020,
chloroplastic-like [Solanum tuberosum]
Length = 1708
Score = 86.3 bits (212), Expect = 9e-15
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Frame = -3
Query: 546 PVRAPKYG-NSNLPGDFSRQPPQFVLELRRGRQG--SDKTQLERLIADYVSPCEKLLVYQ 376
PV YG + N P R+ P F ++LR + L LIA E V
Sbjct: 8 PVTQSGYGFHRNSPEFSKRKIPNFTIQLRATPMNWKLNWQHLNNLIAKLPFTPENPSVVD 67
Query: 375 TGFLAAKLFFKQWSDALDAIVLVWRRRLCGEHLLNPHVVFTGAVVQSDKDEMVERLKALF 196
+ F+ L + +W L+ +V +W RL G H NP ++ + SD++E+ ERLK +F
Sbjct: 68 SNFIVGTLSYVEWYQTLEVMVKLWELRLSGGHCCNP-ILKAKVELPSDREELNERLKGVF 126
Query: 195 KDHIRGLIEGEAVKRWVKKIETVSNEIAQIKVQLKSRRKPQSALELMAKSEGLVAERELM 16
+ + LI G V+ W KK+ V +EI +I + LK + EL K +G+ ER+L+
Sbjct: 127 LEKLNRLINGVLVQTWQKKLGFVIDEIEKISMLLKKPNRVGVYQELWKKKKGIEGERDLI 186
Query: 15 LKRV 4
R+
Sbjct: 187 SLRI 190
>ref|XP_004250516.1| PREDICTED: putative uncharacterized protein At4g01020,
chloroplastic-like [Solanum lycopersicum]
Length = 1705
Score = 86.3 bits (212), Expect = 9e-15
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Frame = -3
Query: 516 NLPGDFSRQPPQFVLELRRGRQG--SDKTQLERLIADYVSPCEKLLVYQTGFLAAKLFFK 343
N P R+ P F ++LR + L LI E V + ++ L +
Sbjct: 19 NSPEFSKRRIPNFTIQLRATPVNWKLNWQHLNSLITKLPFTPENPSVVDSSYIVGTLSYV 78
Query: 342 QWSDALDAIVLVWRRRLCGEHLLNPHVVFTGAVVQSDKDEMVERLKALFKDHIRGLIEGE 163
+W L+ +V +W RL GEH NP ++ + SDK+E+ ER++ +F + + LI G
Sbjct: 79 EWCQTLEVMVKLWELRLSGEHCFNP-ILKAKVELPSDKEELNERIEGVFLEKLNRLINGV 137
Query: 162 AVKRWVKKIETVSNEIAQIKVQLKSRRKPQSALELMAKSEGLVAERELMLKRV 4
V++W KK+ V +EI +I + LK + EL K +G+ ER+L+L R+
Sbjct: 138 LVQKWQKKLGFVIDEIGKISLLLKKPNRIGVYQELCKKKKGIEGERDLILSRI 190
>ref|XP_004502400.1| PREDICTED: putative uncharacterized protein At4g01020,
chloroplastic-like [Cicer arietinum]
Length = 1734
Score = 85.5 bits (210), Expect = 2e-14
Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Frame = -3
Query: 615 PHTYRRGFQGPSHRRDGNSADFRPVRAPKYGNSNLPGDFSRQPPQ----FVLELRRGRQG 448
PH R +R+ G ++ R R P+ R PPQ F+L+L G +
Sbjct: 18 PHAGRSPCPVYHYRKPGFHSNHRVDRPPE-----------RNPPQRVPNFILKLHLGLRA 66
Query: 447 SDKTQLERLIADYVSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLVWRRRLCGEHLLNP 268
+ +E LI+ + Y +AA L F Q +DA DA+V W RL H P
Sbjct: 67 LHRDNVESLISLCKPKPDNFSFYPCDGVAASLNFLQATDAHDAVVWFWESRLSEGHDFTP 126
Query: 267 HVVFTGAVVQSDKDEMVERLKALFKDHIRGLIEGEAVKRWVKKIETVSNEIAQIKVQLKS 88
++ + VV SD+ E+ RL++LF H++ L+EG+ VK+WV++ E +S EIA + L
Sbjct: 127 ELI-SNVVVPSDRIELEGRLRSLFVSHVKELMEGKEVKKWVEEWERLSKEIALVASLLGK 185
Query: 87 RRKPQSALELMAKSEGLVAERELMLKRV 4
+ + + + +GL E+ L+ +R+
Sbjct: 186 PFPIRVQQQNIQRKKGLDDEKGLVERRL 213
>ref|XP_004289298.1| PREDICTED: putative uncharacterized protein At4g01020,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1728
Score = 84.3 bits (207), Expect = 3e-14
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Frame = -3
Query: 486 PQFVLELRRGRQGSDKTQLERLIADYVSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLV 307
P FV++L R+ ++ +E++I + E V T +AA L++ QW DAL+AIV +
Sbjct: 49 PNFVVDLLSDRRDLSESSVEKVIKQCRATPESFRVSPTNLIAASLYYSQWYDALEAIVWL 108
Query: 306 WRRRLCGEHLLNPHVVFTGAVVQSDKDEMVERLKALFKDHIRGLIEGEAVKRWVKKIETV 127
W RL H P + V SD E+ +RLKALF D IR L+ G+ VK+ +K + +
Sbjct: 109 WESRLDRVHRFMPK-LDAKVSVPSDSVELEDRLKALFADRIRLLMGGDEVKKCEEKRQNL 167
Query: 126 SNEIAQIKVQLKSRRKPQSALE-LMAKSEGLVAERELMLKRV 4
+ E ++ K ++PQ E L K E E EL+ R+
Sbjct: 168 AREYERVH---KLSKRPQKYWEDLAGKEERCKGELELVESRI 206
>ref|NP_567206.1| zinc finger-related and helicase and IBR domain-containing protein
[Arabidopsis thaliana]
gi|290463373|sp|P0CE10.1|Y4102_ARATH RecName:
Full=Putative uncharacterized protein At4g01020,
chloroplastic; Flags: Precursor
gi|332656567|gb|AEE81967.1| zinc finger-related and
helicase and IBR domain-containing protein [Arabidopsis
thaliana]
Length = 1787
Score = 82.8 bits (203), Expect = 1e-13
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 7/201 (3%)
Frame = -3
Query: 585 PSHRRDGNSADFRPVRAPKYGNSNLPGDFSRQPPQFVLELRRGRQG------SDKTQLER 424
P++RRD RAP G S +R P F+++L S K ++E
Sbjct: 61 PNYRRD---------RAPSSGFSP---PVTRARPNFIVQLLHPAAANSDTKLSKKQEIES 108
Query: 423 LIADYVSPCEKLLVYQTGFLAAKLFFKQWSDALDAIVLVWRRRLCGEHLLNPHVVFTGAV 244
+ P E + V Q G +AA F+QW DA A+V +W RL G H P ++ V
Sbjct: 109 IALLCEIPEESVHVPQFGCIAASFSFRQWVDARSAVVALWDYRLQGRHDFVPELI-PNVV 167
Query: 243 VQSDKDEMVERLKALFKDHIRGLIE-GEAVKRWVKKIETVSNEIAQIKVQLKSRRKPQSA 67
V SD DE+ +RL+ LF H+ L+E G+ VK+ +I+ S ++A K
Sbjct: 168 VPSDMDELKDRLRDLFSSHVLSLMENGQGVKKVRMEIDDKSRQVASFS------SKRGLK 221
Query: 66 LELMAKSEGLVAERELMLKRV 4
E+ K + L AER+L++ R+
Sbjct: 222 FEVFEKKKALEAERDLVVNRL 242