BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00028843
         (502 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II tra...   187   2e-45
ref|XP_003525658.1| PREDICTED: mediator of RNA polymerase II tra...   180   2e-43
ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266...   180   2e-43
ref|XP_007154971.1| hypothetical protein PHAVU_003G161800g [Phas...   179   4e-43
ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II tra...   175   7e-42
ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citr...   175   7e-42
gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]     174   9e-42
ref|XP_007204608.1| hypothetical protein PRUPE_ppa002594mg [Prun...   174   1e-41
ref|XP_004508515.1| PREDICTED: mediator of RNA polymerase II tra...   174   2e-41
ref|XP_003549778.1| PREDICTED: mediator of RNA polymerase II tra...   172   6e-41
ref|XP_006374395.1| hypothetical protein POPTR_0015s06780g [Popu...   169   4e-40
ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II tra...   168   8e-40
ref|XP_003609292.1| hypothetical protein MTR_4g114100 [Medicago ...   167   1e-39
ref|XP_006400585.1| hypothetical protein EUTSA_v10012923mg [Eutr...   165   7e-39
ref|XP_002873986.1| hypothetical protein ARALYDRAFT_351112 [Arab...   165   7e-39
gb|EYU29301.1| hypothetical protein MIMGU_mgv1a002570mg [Mimulus...   164   2e-38
ref|XP_006286416.1| hypothetical protein CARUB_v10002972mg [Caps...   161   8e-38
ref|NP_197517.3| RNA polymerase II transcription mediator [Arabi...   161   8e-38
ref|XP_007013390.1| RNA polymerase II transcription mediators is...   160   1e-37
ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II tra...   157   1e-36

>ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Cucumis sativus]
           gi|449481525|ref|XP_004156208.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 17-like [Cucumis
           sativus]
          Length = 662

 Score =  187 bits (474), Expect = 2e-45
 Identities = 89/132 (67%), Positives = 105/132 (79%)
 Frame = +1

Query: 58  EDMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXXXX 237
           EDMK+SLDKLP+KRL+AIEENG+E+FP DVG+++KRL +IRRIDFAWA+           
Sbjct: 3   EDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKK 62

Query: 238 XXXXXXPPWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVLSDL 417
                  PW W+ +++NLQ AH ELSVI+DLINTVEANDAVTVAGMTRPKP PNEVL+DL
Sbjct: 63  SSKESSTPWQWQSMIENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLADL 122

Query: 418 SVSAATKLQCFR 453
            VS ATKLQCFR
Sbjct: 123 GVSVATKLQCFR 134


>ref|XP_003525658.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X1 [Glycine max]
           gi|571454302|ref|XP_006579749.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 17-like isoform
           X2 [Glycine max]
          Length = 659

 Score =  180 bits (457), Expect = 2e-43
 Identities = 90/134 (67%), Positives = 104/134 (77%)
 Frame = +1

Query: 52  EGEDMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXX 231
           +G  ++ISLDKLPIKRLD+IEENGIE+FPPDV +D+KRL +IRRIDFAWAV         
Sbjct: 3   DGMQLQISLDKLPIKRLDSIEENGIERFPPDVDYDEKRLSLIRRIDFAWAVEKDEEKKKK 62

Query: 232 XXXXXXXXPPWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVLS 411
                    PW W+ +V+NLQ AH ELSVI+DLINTVEANDAVTVA MTRPK  PNE LS
Sbjct: 63  QKSSKETSTPWQWQGMVENLQLAHQELSVIIDLINTVEANDAVTVASMTRPKLLPNEALS 122

Query: 412 DLSVSAATKLQCFR 453
           DL+VSAATKLQC+R
Sbjct: 123 DLAVSAATKLQCYR 136


>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
           gi|147821405|emb|CAN63500.1| hypothetical protein
           VITISV_011675 [Vitis vinifera]
           gi|297738929|emb|CBI28174.3| unnamed protein product
           [Vitis vinifera]
          Length = 660

 Score =  180 bits (456), Expect = 2e-43
 Identities = 94/135 (69%), Positives = 106/135 (78%)
 Frame = +1

Query: 49  MEGEDMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXX 228
           M+G+ M+ISLDKLPIKRLDAIEENG E+FP DVG+D KR+ +IRRIDFAWAV        
Sbjct: 1   MDGK-MEISLDKLPIKRLDAIEENGAERFPTDVGYDDKRVSLIRRIDFAWAVEKDTKKQK 59

Query: 229 XXXXXXXXXPPWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVL 408
                     PWPW+ LV+NL+ AH ELSVI+DLI+TVEANDAVTVA MTRPKP PNEVL
Sbjct: 60  KASKEEAT--PWPWQSLVENLRLAHQELSVIIDLISTVEANDAVTVASMTRPKPLPNEVL 117

Query: 409 SDLSVSAATKLQCFR 453
           SDL VSAATKLQCFR
Sbjct: 118 SDLGVSAATKLQCFR 132


>ref|XP_007154971.1| hypothetical protein PHAVU_003G161800g [Phaseolus vulgaris]
           gi|561028325|gb|ESW26965.1| hypothetical protein
           PHAVU_003G161800g [Phaseolus vulgaris]
          Length = 663

 Score =  179 bits (454), Expect = 4e-43
 Identities = 87/133 (65%), Positives = 104/133 (78%)
 Frame = +1

Query: 61  DMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXXXXX 240
           D++ISLDKLPIKRLD+IEENG+E+FPPDV +D+KRL +IRRIDFAWA+            
Sbjct: 6   DLQISLDKLPIKRLDSIEENGMERFPPDVDYDEKRLSLIRRIDFAWAIEKDEEKKKQKKS 65

Query: 241 XXXXXPPWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVLSDLS 420
                 PW W+ +V+NLQ AH ELSVI+DLINTVEANDAVTVA MTRPK  PNE LSDL+
Sbjct: 66  SKETSTPWQWQSMVENLQLAHQELSVIIDLINTVEANDAVTVASMTRPKLQPNEALSDLA 125

Query: 421 VSAATKLQCFRVI 459
           VSAA+KLQC+R +
Sbjct: 126 VSAASKLQCYRQV 138


>ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Citrus sinensis]
          Length = 657

 Score =  175 bits (443), Expect = 7e-42
 Identities = 90/141 (63%), Positives = 105/141 (74%), Gaps = 4/141 (2%)
 Frame = +1

Query: 61  DMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXXXXX 240
           +++IS+DKLP+KRLDAIEE G E+FPPDVG+D+KR  +IRRIDFAWAV            
Sbjct: 4   NLEISVDKLPVKRLDAIEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLKKSS 63

Query: 241 XXXXXP----PWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVL 408
                     PW W+ +V+NLQ AH ELSVI+DLINTVEANDAVTVAGMTRPK  PNEVL
Sbjct: 64  KESSSSATTTPWQWQNMVENLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPNEVL 123

Query: 409 SDLSVSAATKLQCFRVIHFLF 471
           SDLSVSAATKLQC+R +   F
Sbjct: 124 SDLSVSAATKLQCYRHLGIYF 144


>ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citrus clementina]
           gi|557554196|gb|ESR64210.1| hypothetical protein
           CICLE_v10007689mg [Citrus clementina]
          Length = 657

 Score =  175 bits (443), Expect = 7e-42
 Identities = 90/141 (63%), Positives = 105/141 (74%), Gaps = 4/141 (2%)
 Frame = +1

Query: 61  DMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXXXXX 240
           +++IS+DKLP+KRLDAIEE G E+FPPDVG+D+KR  +IRRIDFAWAV            
Sbjct: 4   NLEISVDKLPVKRLDAIEETGAERFPPDVGYDEKRESLIRRIDFAWAVEKDDNKRLKKRS 63

Query: 241 XXXXXP----PWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVL 408
                     PW W+ +V+NLQ AH ELSVI+DLINTVEANDAVTVAGMTRPK  PNEVL
Sbjct: 64  KESSSSATTTPWQWQNMVENLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPNEVL 123

Query: 409 SDLSVSAATKLQCFRVIHFLF 471
           SDLSVSAATKLQC+R +   F
Sbjct: 124 SDLSVSAATKLQCYRHLGIYF 144


>gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]
          Length = 701

 Score =  174 bits (442), Expect = 9e-42
 Identities = 89/132 (67%), Positives = 102/132 (77%)
 Frame = +1

Query: 58  EDMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXXXX 237
           E +++SLDKLP+KRLD IEENG E+FP DVG+D+KRL +IRRIDFAWAV           
Sbjct: 3   EKVQVSLDKLPVKRLDVIEENGAERFPSDVGYDEKRLSLIRRIDFAWAVEKDEKKKQKKS 62

Query: 238 XXXXXXPPWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVLSDL 417
                 P WPW+ +V+NLQ A  ELSVI+DLINTVEANDAVTVAGMTRPKP PNEVLSDL
Sbjct: 63  AKESLTP-WPWQTMVENLQLAQQELSVIVDLINTVEANDAVTVAGMTRPKPLPNEVLSDL 121

Query: 418 SVSAATKLQCFR 453
           +VSAA KLQ FR
Sbjct: 122 AVSAAIKLQGFR 133


>ref|XP_007204608.1| hypothetical protein PRUPE_ppa002594mg [Prunus persica]
           gi|462400139|gb|EMJ05807.1| hypothetical protein
           PRUPE_ppa002594mg [Prunus persica]
          Length = 654

 Score =  174 bits (441), Expect = 1e-41
 Identities = 88/135 (65%), Positives = 104/135 (77%)
 Frame = +1

Query: 49  MEGEDMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXX 228
           M+G+ M+ISLDKLPIKRLD IEENG+E+FPPDVG+++KR  +IRRIDFAWAV        
Sbjct: 1   MDGK-MEISLDKLPIKRLDVIEENGLERFPPDVGYEEKRQSLIRRIDFAWAVEKDENKKQ 59

Query: 229 XXXXXXXXXPPWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVL 408
                      W W+ +V+NLQ AH ELSVI+DLINTVE NDAVTVA MTRPKP  +EV+
Sbjct: 60  KKSSKESAATQWQWQSMVENLQLAHQELSVIIDLINTVETNDAVTVASMTRPKPFHDEVM 119

Query: 409 SDLSVSAATKLQCFR 453
           SDL+VSAATKLQCFR
Sbjct: 120 SDLAVSAATKLQCFR 134


>ref|XP_004508515.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X1 [Cicer arietinum]
           gi|502151591|ref|XP_004508516.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 17-like isoform
           X2 [Cicer arietinum] gi|502151593|ref|XP_004508517.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 17-like isoform X3 [Cicer arietinum]
           gi|502151595|ref|XP_004508518.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 17-like isoform
           X4 [Cicer arietinum]
          Length = 658

 Score =  174 bits (440), Expect = 2e-41
 Identities = 84/136 (61%), Positives = 104/136 (76%)
 Frame = +1

Query: 52  EGEDMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXX 231
           EG ++++SLDKLPIKRLD+IEENG+E+FP +  +D+KR+ +IRRIDFAWA+         
Sbjct: 3   EGMELQLSLDKLPIKRLDSIEENGMERFPLNADYDEKRISLIRRIDFAWAIEKDEEKKKQ 62

Query: 232 XXXXXXXXPPWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVLS 411
                    PW W+ +V NL+ AH ELSVI+DLINTVEANDAVTVA MTRPKP PNE LS
Sbjct: 63  KKSSKETSTPWQWQGMVDNLKLAHQELSVIIDLINTVEANDAVTVASMTRPKPLPNEALS 122

Query: 412 DLSVSAATKLQCFRVI 459
           DL+VSAATKLQC+R +
Sbjct: 123 DLAVSAATKLQCYRQV 138


>ref|XP_003549778.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X1 [Glycine max]
           gi|571535792|ref|XP_006600757.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 17-like isoform
           X2 [Glycine max]
          Length = 660

 Score =  172 bits (435), Expect = 6e-41
 Identities = 89/135 (65%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
 Frame = +1

Query: 52  EGEDMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXX 231
           +G  ++ISLDKLPIKRLD+IEENGIE+FP DV +D+KRL +IRRIDFAWAV         
Sbjct: 3   DGMQLQISLDKLPIKRLDSIEENGIERFPLDVDYDEKRLSLIRRIDFAWAVEKDEEKKKK 62

Query: 232 XXXXXXXXP-PWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVL 408
                     PW W+ +V+NLQ AH ELSVI+DLINTVEANDAVTVA MTRPK  PNE L
Sbjct: 63  KQKSSKETSAPWQWQGMVENLQLAHQELSVIIDLINTVEANDAVTVASMTRPKLLPNEAL 122

Query: 409 SDLSVSAATKLQCFR 453
           SDL+VSAATKLQC+R
Sbjct: 123 SDLAVSAATKLQCYR 137


>ref|XP_006374395.1| hypothetical protein POPTR_0015s06780g [Populus trichocarpa]
           gi|550322157|gb|ERP52192.1| hypothetical protein
           POPTR_0015s06780g [Populus trichocarpa]
          Length = 667

 Score =  169 bits (428), Expect = 4e-40
 Identities = 84/142 (59%), Positives = 107/142 (75%), Gaps = 7/142 (4%)
 Frame = +1

Query: 49  MEGEDMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXX 228
           M+G+ +++SLDKLP+KRL++IEENG E+FP D+G+D+K++ +IRRIDFAWAV        
Sbjct: 1   MDGK-LEMSLDKLPVKRLESIEENGFERFPTDIGYDEKQVALIRRIDFAWAVEKEDKEKK 59

Query: 229 XXXXXXXXX-------PPWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPK 387
                            PWPW+ +V+NL  AH ELSVI+DLINTVEANDAVTVAGMTRPK
Sbjct: 60  QKKKQKKSSRESSSTTTPWPWQNMVENLHLAHQELSVIIDLINTVEANDAVTVAGMTRPK 119

Query: 388 PSPNEVLSDLSVSAATKLQCFR 453
           P PNE+L+DL+VS ATKLQC+R
Sbjct: 120 PLPNEILADLAVSTATKLQCYR 141


>ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Fragaria vesca subsp. vesca]
          Length = 655

 Score =  168 bits (425), Expect = 8e-40
 Identities = 87/136 (63%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
 Frame = +1

Query: 49  MEGEDMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXX 228
           M+G+ ++ISLDKLPIKRLD IEENG+E+FPP+VG+++KR  +IRRIDFAWAV        
Sbjct: 1   MDGK-LEISLDKLPIKRLDVIEENGLERFPPEVGYEEKRESLIRRIDFAWAVEKDDKSKQ 59

Query: 229 XXXXXXXXXPP-WPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEV 405
                    P  W ++ +V NL  AH ELSVI+DLINTVEANDAVTVA MTRP+P PNE 
Sbjct: 60  KKRSRETSAPAQWEFQSMVDNLHLAHQELSVIVDLINTVEANDAVTVASMTRPRPFPNEA 119

Query: 406 LSDLSVSAATKLQCFR 453
           LSDL+VSAATKLQCFR
Sbjct: 120 LSDLAVSAATKLQCFR 135


>ref|XP_003609292.1| hypothetical protein MTR_4g114100 [Medicago truncatula]
           gi|355510347|gb|AES91489.1| hypothetical protein
           MTR_4g114100 [Medicago truncatula]
          Length = 856

 Score =  167 bits (423), Expect = 1e-39
 Identities = 84/136 (61%), Positives = 102/136 (75%)
 Frame = +1

Query: 52  EGEDMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXX 231
           EG ++++SLDKLPIKRLD+IEENG E+FP DV +D+KR+ +IRRIDFAWA+         
Sbjct: 3   EGMELQLSLDKLPIKRLDSIEENGNERFPLDVDYDEKRVSLIRRIDFAWAIEKDEEKKKQ 62

Query: 232 XXXXXXXXPPWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVLS 411
                   P W W+ +V+NLQ AH ELSVI+D INTVE NDAVTVA MTRPK  PNE LS
Sbjct: 63  KKSSKETTP-WQWQGMVENLQLAHQELSVIIDFINTVETNDAVTVASMTRPKSLPNEALS 121

Query: 412 DLSVSAATKLQCFRVI 459
           DL+VSAATKLQC+R +
Sbjct: 122 DLAVSAATKLQCYRQV 137


>ref|XP_006400585.1| hypothetical protein EUTSA_v10012923mg [Eutrema salsugineum]
           gi|557101675|gb|ESQ42038.1| hypothetical protein
           EUTSA_v10012923mg [Eutrema salsugineum]
          Length = 650

 Score =  165 bits (417), Expect = 7e-39
 Identities = 84/133 (63%), Positives = 100/133 (75%), Gaps = 2/133 (1%)
 Frame = +1

Query: 61  DMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXXXXX 240
           DM+ISLD+LPIKRL++IEENG E+FP DV +D KR+ +IRRIDFAWA+            
Sbjct: 4   DMEISLDRLPIKRLESIEENGAERFPSDVNYDDKRVSLIRRIDFAWALEEEDELKKKKQK 63

Query: 241 XXXXXPP--WPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVLSD 414
                    W WK +V+NLQ AH ELSVI+DLINTVEANDAVTVAGMT+PKP PNE+LSD
Sbjct: 64  KSSKESSEQWQWKGMVENLQLAHQELSVIIDLINTVEANDAVTVAGMTKPKPMPNELLSD 123

Query: 415 LSVSAATKLQCFR 453
           L+VS ATKLQ +R
Sbjct: 124 LAVSTATKLQSYR 136


>ref|XP_002873986.1| hypothetical protein ARALYDRAFT_351112 [Arabidopsis lyrata subsp.
           lyrata] gi|297319823|gb|EFH50245.1| hypothetical protein
           ARALYDRAFT_351112 [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score =  165 bits (417), Expect = 7e-39
 Identities = 84/133 (63%), Positives = 101/133 (75%), Gaps = 2/133 (1%)
 Frame = +1

Query: 61  DMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXXXXX 240
           DM+ISLD+LPIKRL++IEENG E+FP DVG+D KR+ +IRRIDFAWA+            
Sbjct: 4   DMEISLDRLPIKRLESIEENGAERFPSDVGYDDKRVSLIRRIDFAWALEEEDELKKKKQK 63

Query: 241 XXXXXPP--WPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVLSD 414
                    W WK +V+NLQ AH ELSVI+DLI+TV+ANDAVTVAGMTRPKP PNE+LSD
Sbjct: 64  KSSKDSAEQWKWKGMVENLQLAHQELSVIIDLIDTVQANDAVTVAGMTRPKPLPNEILSD 123

Query: 415 LSVSAATKLQCFR 453
           L+VS ATKLQ +R
Sbjct: 124 LAVSTATKLQGYR 136


>gb|EYU29301.1| hypothetical protein MIMGU_mgv1a002570mg [Mimulus guttatus]
          Length = 657

 Score =  164 bits (414), Expect = 2e-38
 Identities = 88/142 (61%), Positives = 103/142 (72%), Gaps = 7/142 (4%)
 Frame = +1

Query: 49  MEGEDMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXX 228
           M+G +++ISLDKLPIKRL++IEE G E+FP DV +D+KR+++IRRIDFAWAV        
Sbjct: 1   MDG-NLEISLDKLPIKRLESIEEFGSERFPSDVDYDEKRVNLIRRIDFAWAVEREDPSKK 59

Query: 229 XXXXXXXXXPP-------WPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPK 387
                             W WK LV+NLQ AH ELSVI+DLINTVE NDAVTVAGMTRPK
Sbjct: 60  RKTDGATAKESTSTNQQQWQWKSLVENLQLAHQELSVIIDLINTVETNDAVTVAGMTRPK 119

Query: 388 PSPNEVLSDLSVSAATKLQCFR 453
           P PNE LSDL+VS ATKLQCFR
Sbjct: 120 PLPNEHLSDLAVSTATKLQCFR 141


>ref|XP_006286416.1| hypothetical protein CARUB_v10002972mg [Capsella rubella]
           gi|482555122|gb|EOA19314.1| hypothetical protein
           CARUB_v10002972mg [Capsella rubella]
          Length = 651

 Score =  161 bits (408), Expect = 8e-38
 Identities = 83/133 (62%), Positives = 99/133 (74%), Gaps = 2/133 (1%)
 Frame = +1

Query: 61  DMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXXXXX 240
           DM+ISLD+LPIKRL++IEENG E FP DV +D KR+ +IRRIDFAWA+            
Sbjct: 4   DMEISLDRLPIKRLESIEENGAEHFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKKKQK 63

Query: 241 XXXXXPP--WPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVLSD 414
                    W WK +V+NLQ AH ELSVI+DLI+TV+ANDAVTVAGMTRPKP PNE+LSD
Sbjct: 64  KSSKDSTEQWKWKGMVENLQLAHQELSVIIDLIDTVQANDAVTVAGMTRPKPMPNEILSD 123

Query: 415 LSVSAATKLQCFR 453
           L+VS ATKLQ +R
Sbjct: 124 LAVSTATKLQGYR 136


>ref|NP_197517.3| RNA polymerase II transcription mediator [Arabidopsis thaliana]
           gi|395406781|sp|F4K460.1|MED17_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           17 gi|332005425|gb|AED92808.1| RNA polymerase II
           transcription mediator [Arabidopsis thaliana]
          Length = 653

 Score =  161 bits (408), Expect = 8e-38
 Identities = 82/133 (61%), Positives = 100/133 (75%), Gaps = 2/133 (1%)
 Frame = +1

Query: 61  DMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXXXXX 240
           DM+ISLD+LPIKRL++IEENG E+FP DV +D KR+ +IRRIDFAWA+            
Sbjct: 4   DMEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKKKQK 63

Query: 241 XXXXXP--PWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVLSD 414
                    W WK +V+NLQ AH EL+VI+DLI+TV+ANDAVTVAGMTRPKP PNE+LSD
Sbjct: 64  KSSKDSVEQWKWKGMVENLQLAHQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEILSD 123

Query: 415 LSVSAATKLQCFR 453
           L+VS ATKLQ +R
Sbjct: 124 LAVSTATKLQGYR 136


>ref|XP_007013390.1| RNA polymerase II transcription mediators isoform 1 [Theobroma
           cacao] gi|590578008|ref|XP_007013391.1| RNA polymerase
           II transcription mediators isoform 1 [Theobroma cacao]
           gi|508783753|gb|EOY31009.1| RNA polymerase II
           transcription mediators isoform 1 [Theobroma cacao]
           gi|508783754|gb|EOY31010.1| RNA polymerase II
           transcription mediators isoform 1 [Theobroma cacao]
          Length = 663

 Score =  160 bits (406), Expect = 1e-37
 Identities = 83/135 (61%), Positives = 103/135 (76%)
 Frame = +1

Query: 49  MEGEDMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXX 228
           M+G +++ISLDKLP++ LDAIEENG+E++P ++ +D+KR+ +IRRIDFAWA+        
Sbjct: 1   MDG-NLEISLDKLPVRALDAIEENGVERYPHELSYDEKRVSLIRRIDFAWALETDEERER 59

Query: 229 XXXXXXXXXPPWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPNEVL 408
                           LV+NLQ AH ELSVI+DLINTVEANDAVTVAGMTRPKP PNEVL
Sbjct: 60  KKKQKKKNSKDATATWLVENLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVL 119

Query: 409 SDLSVSAATKLQCFR 453
           SDL+VSAATKLQC+R
Sbjct: 120 SDLAVSAATKLQCYR 134


>ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Solanum lycopersicum]
          Length = 663

 Score =  157 bits (397), Expect = 1e-36
 Identities = 81/138 (58%), Positives = 99/138 (71%), Gaps = 7/138 (5%)
 Frame = +1

Query: 61  DMKISLDKLPIKRLDAIEENGIEKFPPDVGHDQKRLDMIRRIDFAWAVXXXXXXXXXXXX 240
           +++IS+DKLPIKRL+ IEE G E+FP D+G+D+K +++IRRIDFAWAV            
Sbjct: 4   NLEISVDKLPIKRLEYIEEQGAERFPSDIGYDEKTVNLIRRIDFAWAVEREEPSKKQKKS 63

Query: 241 XXXXXP-------PWPWKILVQNLQSAHSELSVIMDLINTVEANDAVTVAGMTRPKPSPN 399
                        PW W+ LV+NL+ AH EL VI+DLI+TVEANDAVTVAGMTRPK  PN
Sbjct: 64  SSATSSKETSSSQPWQWQSLVENLRLAHQELQVIIDLIHTVEANDAVTVAGMTRPKQLPN 123

Query: 400 EVLSDLSVSAATKLQCFR 453
           E LSDL+VS ATKLQCFR
Sbjct: 124 EHLSDLAVSMATKLQCFR 141