BLASTX nr result

ID: Cocculus22_contig00028831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00028831
         (403 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321853.1| hydroxyproline-rich glycoprotein [Populus tr...    58   2e-06

>ref|XP_002321853.1| hydroxyproline-rich glycoprotein [Populus trichocarpa]
           gi|222868849|gb|EEF05980.1| hydroxyproline-rich
           glycoprotein [Populus trichocarpa]
          Length = 333

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 29/78 (37%), Positives = 39/78 (50%)
 Frame = +3

Query: 81  LLFCSSMEGNESICPPYQQQVRKQGSVPFLWEEKPGTPKKECKLERVQAXXXXXXXXXXX 260
           + F   M G E I    ++ +R+  SVPFLWE +PG  K++ K E               
Sbjct: 14  IAFYFKMAGLEVIDSSRKKHIRQPPSVPFLWEVRPGVAKRDWKPEVSSVTPVQLPPVKLI 73

Query: 261 XXXXFKWEEEPGKPLNCF 314
               F WEE+PGKPL+CF
Sbjct: 74  ASVPFNWEEKPGKPLSCF 91


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