BLASTX nr result
ID: Cocculus22_contig00028827
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00028827
(331 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006452401.1| hypothetical protein CICLE_v10010304mg [Citr... 124 1e-26
ref|XP_002317341.2| hypothetical protein POPTR_0011s09190g [Popu... 124 2e-26
ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Viti... 124 2e-26
ref|XP_004295833.1| PREDICTED: DNA mismatch repair protein MSH5-... 123 3e-26
ref|XP_007214518.1| hypothetical protein PRUPE_ppa015717mg [Prun... 122 4e-26
ref|XP_006475043.1| PREDICTED: DNA mismatch repair protein MSH5-... 122 5e-26
emb|CBI26657.3| unnamed protein product [Vitis vinifera] 117 1e-24
ref|XP_006595730.1| PREDICTED: DNA mismatch repair protein MSH5-... 115 5e-24
ref|XP_006595729.1| PREDICTED: DNA mismatch repair protein MSH5-... 115 5e-24
ref|XP_006595728.1| PREDICTED: DNA mismatch repair protein MSH5-... 115 5e-24
ref|XP_007020780.1| MUTS [Theobroma cacao] gi|508720408|gb|EOY12... 115 5e-24
ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-... 115 5e-24
ref|XP_002529913.1| conserved hypothetical protein [Ricinus comm... 115 8e-24
ref|XP_007142300.1| hypothetical protein PHAVU_008G268900g [Phas... 112 7e-23
ref|XP_007142299.1| hypothetical protein PHAVU_008G268900g [Phas... 112 7e-23
gb|EEE64238.1| hypothetical protein OsJ_19071 [Oryza sativa Japo... 112 7e-23
ref|NP_001055948.1| Os05g0498300 [Oryza sativa Japonica Group] g... 112 7e-23
ref|XP_004491410.1| PREDICTED: DNA mismatch repair protein MSH5-... 110 2e-22
ref|XP_004961619.1| PREDICTED: DNA mismatch repair protein MSH5-... 109 5e-22
ref|XP_006654595.1| PREDICTED: DNA mismatch repair protein MSH5-... 108 8e-22
>ref|XP_006452401.1| hypothetical protein CICLE_v10010304mg [Citrus clementina]
gi|557555627|gb|ESR65641.1| hypothetical protein
CICLE_v10010304mg [Citrus clementina]
Length = 799
Score = 124 bits (311), Expect = 1e-26
Identities = 58/72 (80%), Positives = 67/72 (93%)
Frame = -3
Query: 233 MQVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTSTKI 54
MQVYMACI+ G+RVGV+YYDSSIRQL+V+EVWED +DFPLID+VKYQA+PQIIYTSTK
Sbjct: 1 MQVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKS 60
Query: 53 EESFLSALERGD 18
EESFLSAL+R D
Sbjct: 61 EESFLSALKRSD 72
>ref|XP_002317341.2| hypothetical protein POPTR_0011s09190g [Populus trichocarpa]
gi|550327984|gb|EEE97953.2| hypothetical protein
POPTR_0011s09190g [Populus trichocarpa]
Length = 791
Score = 124 bits (310), Expect = 2e-26
Identities = 58/75 (77%), Positives = 68/75 (90%)
Frame = -3
Query: 242 DLQMQVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTS 63
+ Q QVYMACI+ G+RVG++YYDSSIRQL+V+EVWEDG++DFPLIDLVKYQAKP IYTS
Sbjct: 8 EAQPQVYMACILHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLNIYTS 67
Query: 62 TKIEESFLSALERGD 18
TK EESFLSAL+R D
Sbjct: 68 TKCEESFLSALQRSD 82
>ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Vitis vinifera]
Length = 807
Score = 124 bits (310), Expect = 2e-26
Identities = 57/71 (80%), Positives = 67/71 (94%)
Frame = -3
Query: 230 QVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTSTKIE 51
QVYMACI+ G+RVG++YYDSSIRQL+V+EVWEDG++DFPLIDLVKYQAKP IIYTSTK E
Sbjct: 12 QVYMACILHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLIIYTSTKCE 71
Query: 50 ESFLSALERGD 18
+SFLSAL+R D
Sbjct: 72 DSFLSALQRSD 82
>ref|XP_004295833.1| PREDICTED: DNA mismatch repair protein MSH5-like [Fragaria vesca
subsp. vesca]
Length = 809
Score = 123 bits (308), Expect = 3e-26
Identities = 58/71 (81%), Positives = 66/71 (92%)
Frame = -3
Query: 230 QVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTSTKIE 51
QVYMACI QG+RVGV+YYDSSIRQL+VME+WEDG+ DFPLID+VKYQAKP IIYTSTK E
Sbjct: 13 QVYMACIRQGHRVGVSYYDSSIRQLHVMELWEDGSMDFPLIDMVKYQAKPLIIYTSTKSE 72
Query: 50 ESFLSALERGD 18
E+FLSAL+R D
Sbjct: 73 EAFLSALQRSD 83
>ref|XP_007214518.1| hypothetical protein PRUPE_ppa015717mg [Prunus persica]
gi|462410383|gb|EMJ15717.1| hypothetical protein
PRUPE_ppa015717mg [Prunus persica]
Length = 798
Score = 122 bits (307), Expect = 4e-26
Identities = 57/72 (79%), Positives = 65/72 (90%)
Frame = -3
Query: 233 MQVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTSTKI 54
MQVYMACI+ G RVG++YYDSSIRQL+V+EVWEDG+ DFPLIDLVKYQA+P IIY STK
Sbjct: 1 MQVYMACILHGQRVGISYYDSSIRQLHVLEVWEDGSTDFPLIDLVKYQARPLIIYASTKS 60
Query: 53 EESFLSALERGD 18
EESFLSAL+R D
Sbjct: 61 EESFLSALQRSD 72
>ref|XP_006475043.1| PREDICTED: DNA mismatch repair protein MSH5-like [Citrus sinensis]
Length = 811
Score = 122 bits (306), Expect = 5e-26
Identities = 57/71 (80%), Positives = 66/71 (92%)
Frame = -3
Query: 230 QVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTSTKIE 51
QVYMACI+ G+RVGV+YYDSSIRQL+V+EVWED +DFPLID+VKYQA+PQIIYTSTK E
Sbjct: 14 QVYMACILHGHRVGVSYYDSSIRQLHVLEVWEDSNSDFPLIDIVKYQAQPQIIYTSTKSE 73
Query: 50 ESFLSALERGD 18
ESFLSAL+R D
Sbjct: 74 ESFLSALKRSD 84
>emb|CBI26657.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 117 bits (294), Expect = 1e-24
Identities = 54/68 (79%), Positives = 64/68 (94%)
Frame = -3
Query: 221 MACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTSTKIEESF 42
MACI+ G+RVG++YYDSSIRQL+V+EVWEDG++DFPLIDLVKYQAKP IIYTSTK E+SF
Sbjct: 1 MACILHGHRVGISYYDSSIRQLHVLEVWEDGSSDFPLIDLVKYQAKPLIIYTSTKCEDSF 60
Query: 41 LSALERGD 18
LSAL+R D
Sbjct: 61 LSALQRSD 68
>ref|XP_006595730.1| PREDICTED: DNA mismatch repair protein MSH5-like isoform X3
[Glycine max]
Length = 782
Score = 115 bits (289), Expect = 5e-24
Identities = 53/75 (70%), Positives = 64/75 (85%)
Frame = -3
Query: 242 DLQMQVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTS 63
D QVYMACI+ GNR+GV+YYDS++RQLYV+EVW+DG FP+IDLVKYQA P +IYTS
Sbjct: 8 DAVPQVYMACILNGNRIGVSYYDSTLRQLYVLEVWDDGDKGFPVIDLVKYQANPLVIYTS 67
Query: 62 TKIEESFLSALERGD 18
TK EESFLSAL++ D
Sbjct: 68 TKSEESFLSALQQRD 82
>ref|XP_006595729.1| PREDICTED: DNA mismatch repair protein MSH5-like isoform X2
[Glycine max]
Length = 802
Score = 115 bits (289), Expect = 5e-24
Identities = 53/75 (70%), Positives = 64/75 (85%)
Frame = -3
Query: 242 DLQMQVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTS 63
D QVYMACI+ GNR+GV+YYDS++RQLYV+EVW+DG FP+IDLVKYQA P +IYTS
Sbjct: 8 DAVPQVYMACILNGNRIGVSYYDSTLRQLYVLEVWDDGDKGFPVIDLVKYQANPLVIYTS 67
Query: 62 TKIEESFLSALERGD 18
TK EESFLSAL++ D
Sbjct: 68 TKSEESFLSALQQRD 82
>ref|XP_006595728.1| PREDICTED: DNA mismatch repair protein MSH5-like isoform X1
[Glycine max]
Length = 812
Score = 115 bits (289), Expect = 5e-24
Identities = 53/75 (70%), Positives = 64/75 (85%)
Frame = -3
Query: 242 DLQMQVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTS 63
D QVYMACI+ GNR+GV+YYDS++RQLYV+EVW+DG FP+IDLVKYQA P +IYTS
Sbjct: 8 DAVPQVYMACILNGNRIGVSYYDSTLRQLYVLEVWDDGDKGFPVIDLVKYQANPLVIYTS 67
Query: 62 TKIEESFLSALERGD 18
TK EESFLSAL++ D
Sbjct: 68 TKSEESFLSALQQRD 82
>ref|XP_007020780.1| MUTS [Theobroma cacao] gi|508720408|gb|EOY12305.1| MUTS [Theobroma
cacao]
Length = 818
Score = 115 bits (289), Expect = 5e-24
Identities = 52/71 (73%), Positives = 64/71 (90%)
Frame = -3
Query: 230 QVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTSTKIE 51
QVYMACI G+R+G++YYDSSIRQL V+EVW+DG++DFP+I+LVKYQAKP +IYTSTK E
Sbjct: 13 QVYMACIQHGHRIGISYYDSSIRQLNVLEVWDDGSSDFPMIELVKYQAKPVVIYTSTKAE 72
Query: 50 ESFLSALERGD 18
ESFLSAL+ D
Sbjct: 73 ESFLSALQGSD 83
>ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-like [Cucumis sativus]
gi|449519898|ref|XP_004166971.1| PREDICTED: DNA mismatch
repair protein MSH5-like [Cucumis sativus]
Length = 807
Score = 115 bits (289), Expect = 5e-24
Identities = 52/71 (73%), Positives = 64/71 (90%)
Frame = -3
Query: 230 QVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTSTKIE 51
Q+YMAC+ G +VGV+YYDSSIRQL+V+EVWEDG+ ++PLIDLVKYQAKP +IYTSTK E
Sbjct: 12 QIYMACVKHGQKVGVSYYDSSIRQLHVLEVWEDGSIEYPLIDLVKYQAKPLMIYTSTKSE 71
Query: 50 ESFLSALERGD 18
ESFL+AL+R D
Sbjct: 72 ESFLAALQRSD 82
>ref|XP_002529913.1| conserved hypothetical protein [Ricinus communis]
gi|223530590|gb|EEF32467.1| conserved hypothetical
protein [Ricinus communis]
Length = 351
Score = 115 bits (287), Expect = 8e-24
Identities = 52/71 (73%), Positives = 64/71 (90%)
Frame = -3
Query: 230 QVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTSTKIE 51
QVYMACI+ G+RVG++YYDSSIRQL+V+EVWEDG+ DFPLIDLVKYQA+P IY S+K E
Sbjct: 9 QVYMACILHGHRVGISYYDSSIRQLHVLEVWEDGSLDFPLIDLVKYQAQPLTIYASSKSE 68
Query: 50 ESFLSALERGD 18
ESF++AL+R D
Sbjct: 69 ESFINALQRSD 79
>ref|XP_007142300.1| hypothetical protein PHAVU_008G268900g [Phaseolus vulgaris]
gi|561015433|gb|ESW14294.1| hypothetical protein
PHAVU_008G268900g [Phaseolus vulgaris]
Length = 808
Score = 112 bits (279), Expect = 7e-23
Identities = 51/75 (68%), Positives = 63/75 (84%)
Frame = -3
Query: 242 DLQMQVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTS 63
D QVYMACI+ G+R+GV+YYDS++RQLYV+EVW+DG FP+IDLVKYQA P +IYTS
Sbjct: 8 DAVPQVYMACILNGHRIGVSYYDSTLRQLYVLEVWDDGDKGFPIIDLVKYQANPLVIYTS 67
Query: 62 TKIEESFLSALERGD 18
TK EESFLS L++ D
Sbjct: 68 TKSEESFLSDLQQKD 82
>ref|XP_007142299.1| hypothetical protein PHAVU_008G268900g [Phaseolus vulgaris]
gi|561015432|gb|ESW14293.1| hypothetical protein
PHAVU_008G268900g [Phaseolus vulgaris]
Length = 800
Score = 112 bits (279), Expect = 7e-23
Identities = 51/75 (68%), Positives = 63/75 (84%)
Frame = -3
Query: 242 DLQMQVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTS 63
D QVYMACI+ G+R+GV+YYDS++RQLYV+EVW+DG FP+IDLVKYQA P +IYTS
Sbjct: 8 DAVPQVYMACILNGHRIGVSYYDSTLRQLYVLEVWDDGDKGFPIIDLVKYQANPLVIYTS 67
Query: 62 TKIEESFLSALERGD 18
TK EESFLS L++ D
Sbjct: 68 TKSEESFLSDLQQKD 82
>gb|EEE64238.1| hypothetical protein OsJ_19071 [Oryza sativa Japonica Group]
Length = 1046
Score = 112 bits (279), Expect = 7e-23
Identities = 50/75 (66%), Positives = 63/75 (84%)
Frame = -3
Query: 242 DLQMQVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTS 63
++ QV+MAC+MQG RVG+AYYDSS+ QL+V+E+WED T DFPLIDLVKYQ+KP IYTS
Sbjct: 250 EVDSQVHMACVMQGRRVGIAYYDSSMHQLFVLEIWEDITEDFPLIDLVKYQSKPSTIYTS 309
Query: 62 TKIEESFLSALERGD 18
TK +E+ L AL+R D
Sbjct: 310 TKTDEALLLALQRND 324
>ref|NP_001055948.1| Os05g0498300 [Oryza sativa Japonica Group]
gi|48475216|gb|AAT44285.1| unknown protein [Oryza sativa
Japonica Group] gi|113579499|dbj|BAF17862.1|
Os05g0498300 [Oryza sativa Japonica Group]
Length = 809
Score = 112 bits (279), Expect = 7e-23
Identities = 50/75 (66%), Positives = 63/75 (84%)
Frame = -3
Query: 242 DLQMQVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTS 63
++ QV+MAC+MQG RVG+AYYDSS+ QL+V+E+WED T DFPLIDLVKYQ+KP IYTS
Sbjct: 13 EVDSQVHMACVMQGRRVGIAYYDSSMHQLFVLEIWEDITEDFPLIDLVKYQSKPSTIYTS 72
Query: 62 TKIEESFLSALERGD 18
TK +E+ L AL+R D
Sbjct: 73 TKTDEALLLALQRND 87
>ref|XP_004491410.1| PREDICTED: DNA mismatch repair protein MSH5-like [Cicer arietinum]
Length = 809
Score = 110 bits (276), Expect = 2e-22
Identities = 49/72 (68%), Positives = 62/72 (86%)
Frame = -3
Query: 230 QVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTSTKIE 51
QVYMACI G+R+GV+YYDSS+RQLYV+E W+DG FP+IDLVKYQA P +IYTST+ E
Sbjct: 13 QVYMACIQCGHRIGVSYYDSSLRQLYVLEAWDDGDKGFPVIDLVKYQANPLVIYTSTRCE 72
Query: 50 ESFLSALERGDQ 15
ESFL+AL++ D+
Sbjct: 73 ESFLAALQQSDE 84
>ref|XP_004961619.1| PREDICTED: DNA mismatch repair protein MSH5-like [Setaria italica]
Length = 814
Score = 109 bits (272), Expect = 5e-22
Identities = 48/74 (64%), Positives = 61/74 (82%)
Frame = -3
Query: 239 LQMQVYMACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTST 60
+ QV+MAC+MQG RVGVAYYD++ RQL+V+E+WED +FPLIDLVK+Q+KP IY ST
Sbjct: 19 IDSQVHMACVMQGRRVGVAYYDTNTRQLFVLEIWEDSAGEFPLIDLVKFQSKPSTIYAST 78
Query: 59 KIEESFLSALERGD 18
K EE+ LSAL+R D
Sbjct: 79 KTEEALLSALQRND 92
>ref|XP_006654595.1| PREDICTED: DNA mismatch repair protein MSH5-like [Oryza
brachyantha]
Length = 790
Score = 108 bits (270), Expect = 8e-22
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -3
Query: 221 MACIMQGNRVGVAYYDSSIRQLYVMEVWEDGTADFPLIDLVKYQAKPQIIYTSTKIEESF 42
MAC+MQG RVGVAYYDSS+RQL+V+E+WED DFPLIDLVKYQ++P IYTSTK EES
Sbjct: 1 MACVMQGRRVGVAYYDSSMRQLFVLEIWEDIAEDFPLIDLVKYQSRPSTIYTSTKTEESL 60
Query: 41 LSALERGD 18
L AL+R D
Sbjct: 61 LLALQRND 68