BLASTX nr result
ID: Cocculus22_contig00028817
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00028817
(416 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 186 4e-45
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 186 4e-45
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 175 5e-42
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 163 3e-38
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 162 3e-38
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 162 3e-38
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 162 5e-38
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 162 5e-38
ref|XP_007208145.1| hypothetical protein PRUPE_ppa024521mg, part... 159 4e-37
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 151 8e-35
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 151 1e-34
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s... 145 7e-33
ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas... 144 1e-32
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 140 1e-31
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 136 3e-30
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 135 5e-30
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 134 1e-29
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 133 2e-29
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 133 2e-29
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 132 4e-29
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 186 bits (471), Expect = 4e-45
Identities = 92/139 (66%), Positives = 112/139 (80%), Gaps = 1/139 (0%)
Frame = +2
Query: 2 SSALSHKTVPRASVNIVPVLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIP 181
SSA+SH +AS ++V +LNPV+VL+LFKRM DEDC+LL L +RPEKL++T+I VPPI
Sbjct: 201 SSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIA 260
Query: 182 IRPSVFTDGGARSNENDITARLSTIIRANAILRQELQCT-DKSKCLADWDLLQVEVAQYI 358
IRPSVF DGG +SNEND+T RL II+ANA L QELQ T SKCLA WD LQ+EVAQYI
Sbjct: 261 IRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYI 320
Query: 359 NSDIRGIPLSMQSATPYRG 415
NSD+RG+PL+MQ+A P G
Sbjct: 321 NSDVRGVPLAMQAARPLSG 339
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 186 bits (471), Expect = 4e-45
Identities = 92/139 (66%), Positives = 112/139 (80%), Gaps = 1/139 (0%)
Frame = +2
Query: 2 SSALSHKTVPRASVNIVPVLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIP 181
SSA+SH +AS ++V +LNPV+VL+LFKRM DEDC+LL L +RPEKL++T+I VPPI
Sbjct: 201 SSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIA 260
Query: 182 IRPSVFTDGGARSNENDITARLSTIIRANAILRQELQCT-DKSKCLADWDLLQVEVAQYI 358
IRPSVF DGG +SNEND+T RL II+ANA L QELQ T SKCLA WD LQ+EVAQYI
Sbjct: 261 IRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYI 320
Query: 359 NSDIRGIPLSMQSATPYRG 415
NSD+RG+PL+MQ+A P G
Sbjct: 321 NSDVRGVPLAMQAARPLSG 339
>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
[Theobroma cacao]
Length = 1395
Score = 175 bits (444), Expect = 5e-42
Identities = 94/139 (67%), Positives = 110/139 (79%), Gaps = 2/139 (1%)
Frame = +2
Query: 5 SALSHKTVPRASVNIVP-VLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIP 181
SA+SH +AS N+ VLNPV+VL+LFKRM D DCELLYL DRPEKLIIT+IAVPPIP
Sbjct: 199 SAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLSDRPEKLIITNIAVPPIP 258
Query: 182 IRPSVFTDGGARSNENDITARLSTIIRANAILRQELQCTDKS-KCLADWDLLQVEVAQYI 358
IRPSV D G++SNENDIT RL II+ANA LRQEL T+ + KCL W++LQVEVAQYI
Sbjct: 259 IRPSVIMD-GSQSNENDITERLKRIIQANASLRQELVETNAAFKCLGGWEMLQVEVAQYI 317
Query: 359 NSDIRGIPLSMQSATPYRG 415
NSD+RG+P SMQ + P G
Sbjct: 318 NSDVRGVPFSMQVSKPLSG 336
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Solanum lycopersicum]
Length = 1390
Score = 163 bits (412), Expect = 3e-38
Identities = 83/136 (61%), Positives = 99/136 (72%)
Frame = +2
Query: 8 ALSHKTVPRASVNIVPVLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIPIR 187
A+S K RASV++ P ++P V +LFK M+DEDCELLYL DRPEKL++T I VPPI IR
Sbjct: 201 AISDKRELRASVSVPPEIDPKVVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIR 260
Query: 188 PSVFTDGGARSNENDITARLSTIIRANAILRQELQCTDKSKCLADWDLLQVEVAQYINSD 367
PSVF DGG +SNENDIT RL II+ANA L QE+ + K L W LQ+EVAQYINSD
Sbjct: 261 PSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPVKSLNQWIDLQMEVAQYINSD 320
Query: 368 IRGIPLSMQSATPYRG 415
+RG+PL MQ P G
Sbjct: 321 VRGVPLQMQPPRPLSG 336
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Solanum tuberosum]
Length = 1243
Score = 162 bits (411), Expect = 3e-38
Identities = 84/136 (61%), Positives = 100/136 (73%)
Frame = +2
Query: 8 ALSHKTVPRASVNIVPVLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIPIR 187
A+S K RASV++ P L+P V +LFK M+DEDCELLYL DRPEKL++T I VPPI IR
Sbjct: 201 AISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIR 260
Query: 188 PSVFTDGGARSNENDITARLSTIIRANAILRQELQCTDKSKCLADWDLLQVEVAQYINSD 367
PSVF DGG +SNENDIT RL II+ANA L QE+ + K L W LQ+EVAQYINSD
Sbjct: 261 PSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPVKSLNLWIDLQMEVAQYINSD 320
Query: 368 IRGIPLSMQSATPYRG 415
+RG+PL MQ+ P G
Sbjct: 321 VRGVPLHMQAQRPLSG 336
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Solanum tuberosum]
Length = 1394
Score = 162 bits (411), Expect = 3e-38
Identities = 84/136 (61%), Positives = 100/136 (73%)
Frame = +2
Query: 8 ALSHKTVPRASVNIVPVLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIPIR 187
A+S K RASV++ P L+P V +LFK M+DEDCELLYL DRPEKL++T I VPPI IR
Sbjct: 201 AISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIR 260
Query: 188 PSVFTDGGARSNENDITARLSTIIRANAILRQELQCTDKSKCLADWDLLQVEVAQYINSD 367
PSVF DGG +SNENDIT RL II+ANA L QE+ + K L W LQ+EVAQYINSD
Sbjct: 261 PSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPVKSLNLWIDLQMEVAQYINSD 320
Query: 368 IRGIPLSMQSATPYRG 415
+RG+PL MQ+ P G
Sbjct: 321 VRGVPLHMQAQRPLSG 336
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 162 bits (410), Expect = 5e-38
Identities = 87/140 (62%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Frame = +2
Query: 2 SSALSHKTVPRASVNIVP-VLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPI 178
+SA++H +A+VN+ +LNPV VL LFKRM D DCE+LYL +RPEKLIIT+IAVPPI
Sbjct: 205 ASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPI 264
Query: 179 PIRPSVFTDGGARSNENDITARLSTIIRANAILRQEL-QCTDKSKCLADWDLLQVEVAQY 355
IRPSV D G++SNENDIT RL II+ NA L+QEL + K LA W+ LQVEVAQY
Sbjct: 265 AIRPSVIMD-GSQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQY 323
Query: 356 INSDIRGIPLSMQSATPYRG 415
INSD+RG+P SMQ A P G
Sbjct: 324 INSDVRGVPFSMQVARPLSG 343
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 162 bits (410), Expect = 5e-38
Identities = 87/140 (62%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Frame = +2
Query: 2 SSALSHKTVPRASVNIVP-VLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPI 178
+SA++H +A+VN+ +LNPV VL LFKRM D DCE+LYL +RPEKLIIT+IAVPPI
Sbjct: 220 ASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPI 279
Query: 179 PIRPSVFTDGGARSNENDITARLSTIIRANAILRQEL-QCTDKSKCLADWDLLQVEVAQY 355
IRPSV D G++SNENDIT RL II+ NA L+QEL + K LA W+ LQVEVAQY
Sbjct: 280 AIRPSVIMD-GSQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQY 338
Query: 356 INSDIRGIPLSMQSATPYRG 415
INSD+RG+P SMQ A P G
Sbjct: 339 INSDVRGVPFSMQVARPLSG 358
>ref|XP_007208145.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
gi|462403787|gb|EMJ09344.1| hypothetical protein
PRUPE_ppa024521mg, partial [Prunus persica]
Length = 867
Score = 159 bits (402), Expect = 4e-37
Identities = 85/139 (61%), Positives = 103/139 (74%), Gaps = 2/139 (1%)
Frame = +2
Query: 5 SALSHKTVPRASVNIVP-VLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIP 181
+ LSH +AS N+ +LNP R+ +LFKRM DEDCELL L +RP+ LII +IAVPPI
Sbjct: 209 TTLSHTKESKASFNVATHMLNPARIYSLFKRMVDEDCELLNLSNRPQNLIIKNIAVPPIA 268
Query: 182 IRPSVFTDGGARSNENDITARLSTIIRANAILRQE-LQCTDKSKCLADWDLLQVEVAQYI 358
IRPSV D + SNENDIT RL II++NAILR++ L+ KCLA WD+LQVEVAQYI
Sbjct: 269 IRPSVIVD-RSLSNENDITERLKRIIQSNAILRRDLLEAKSAPKCLASWDILQVEVAQYI 327
Query: 359 NSDIRGIPLSMQSATPYRG 415
NSDIRG+P SMQ+A P G
Sbjct: 328 NSDIRGVPFSMQTAKPLSG 346
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Glycine max]
Length = 1391
Score = 151 bits (382), Expect = 8e-35
Identities = 85/139 (61%), Positives = 101/139 (72%), Gaps = 2/139 (1%)
Frame = +2
Query: 5 SALSHKTVPRASVNIVP-VLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIP 181
SALS RA+ N+ +LNP +VL+LFKRM DEDCELLY+ +RPEKLI+T++ VPPI
Sbjct: 201 SALSRMKDSRATTNVSNRILNPFQVLSLFKRMLDEDCELLYVAERPEKLIMTNVVVPPIA 260
Query: 182 IRPSVFTDGGARSNENDITARLSTIIRANAILRQELQ-CTDKSKCLADWDLLQVEVAQYI 358
IRPSV D + SNENDIT RL II+ANA+LRQELQ T SK L WD+LQ EVAQ+I
Sbjct: 261 IRPSVVMD-ESLSNENDITERLKNIIQANAVLRQELQESTFSSKFLDGWDILQNEVAQFI 319
Query: 359 NSDIRGIPLSMQSATPYRG 415
NSD+RGIP MQ G
Sbjct: 320 NSDVRGIPFYMQPTKQLAG 338
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Cucumis sativus]
Length = 1400
Score = 151 bits (381), Expect = 1e-34
Identities = 80/130 (61%), Positives = 99/130 (76%), Gaps = 2/130 (1%)
Frame = +2
Query: 32 RASVNIV-PVLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIPIRPSVFTDG 208
RA N+ +LNP RVL LF+RM+DEDCELL+L +RPEKLIIT++ VPPI IRPSV D
Sbjct: 207 RAPYNVSNDILNPFRVLCLFQRMSDEDCELLFLSNRPEKLIITNVLVPPIAIRPSVIMD- 265
Query: 209 GARSNENDITARLSTIIRANAILRQELQCTD-KSKCLADWDLLQVEVAQYINSDIRGIPL 385
G++SNENDIT RL II+ NA + QEL ++ ++KCL WD+LQ EVAQ INSD+RGIP
Sbjct: 266 GSQSNENDITERLKRIIQQNASVSQELSTSNSQAKCLESWDMLQSEVAQLINSDVRGIPF 325
Query: 386 SMQSATPYRG 415
SMQ + P G
Sbjct: 326 SMQVSKPLAG 335
>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Fragaria vesca subsp. vesca]
Length = 1390
Score = 145 bits (365), Expect = 7e-33
Identities = 76/131 (58%), Positives = 98/131 (74%), Gaps = 2/131 (1%)
Frame = +2
Query: 29 PRASVNIVP-VLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIPIRPSVFTD 205
P+AS+N+ P +LNPV+V +LFKRM DEDCELL L RPE LI+T IAVPPI IRPSV D
Sbjct: 206 PKASINLQPHMLNPVKVFSLFKRMLDEDCELLNLKSRPENLIMTTIAVPPIAIRPSVLVD 265
Query: 206 GGARSNENDITARLSTIIRANAILRQELQCTDKSKCLADWDLLQVEVAQYINSDIRGIPL 385
G++SNENDIT RL II+ NA ++Q+L ++ L++W++LQ EVA YINSD+RG+P
Sbjct: 266 -GSQSNENDITERLKKIIQTNACVQQDLSEGSTTRFLSNWEILQAEVALYINSDVRGVPY 324
Query: 386 SM-QSATPYRG 415
M +A P G
Sbjct: 325 HMTANAKPLNG 335
>ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
gi|561005141|gb|ESW04135.1| hypothetical protein
PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 144 bits (364), Expect = 1e-32
Identities = 81/139 (58%), Positives = 101/139 (72%), Gaps = 2/139 (1%)
Frame = +2
Query: 5 SALSHKTVPRASVNIVP-VLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIP 181
S LS +A+ N+ +LNP +VL+LF++M DEDCELLY+ +RPEKLIIT+I VPPI
Sbjct: 201 STLSRIKDSKATANVSNRILNPFQVLSLFRKMLDEDCELLYVAERPEKLIITNIVVPPIA 260
Query: 182 IRPSVFTDGGARSNENDITARLSTIIRANAILRQELQ-CTDKSKCLADWDLLQVEVAQYI 358
IRPSV D + SNENDIT RL II+ANA+LRQELQ + SK L W++LQ EVAQ+I
Sbjct: 261 IRPSVVMD-ESLSNENDITERLKNIIQANAVLRQELQESSVSSKFLDGWEILQNEVAQFI 319
Query: 359 NSDIRGIPLSMQSATPYRG 415
NS++RGIP MQS G
Sbjct: 320 NSEVRGIPFYMQSTKQLAG 338
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 140 bits (354), Expect = 1e-31
Identities = 83/140 (59%), Positives = 97/140 (69%), Gaps = 3/140 (2%)
Frame = +2
Query: 5 SALSHKTVPRASVNIVP-VLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIP 181
SA+ H RA + + +LNPVRVL+LF+RM +EDCELLYL RPEKLIIT IAVPPI
Sbjct: 204 SAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCELLYLQGRPEKLIITTIAVPPIS 263
Query: 182 IRPSVFTDGGARSNENDITARLSTIIRANAILRQELQCTDKS--KCLADWDLLQVEVAQY 355
IRPSVFT+ G++SNENDIT RL II+ NA LR EL ++ K L WD LQ V Y
Sbjct: 264 IRPSVFTE-GSQSNENDITERLKQIIQFNAKLRLELLEGRRTGIKYLIGWDELQAVVTLY 322
Query: 356 INSDIRGIPLSMQSATPYRG 415
INSD+R IPL MQ P G
Sbjct: 323 INSDVR-IPLDMQVGRPLSG 341
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 136 bits (342), Expect = 3e-30
Identities = 78/140 (55%), Positives = 100/140 (71%), Gaps = 3/140 (2%)
Frame = +2
Query: 5 SALSHKTVPRASVNIVP-VLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIP 181
SA++H RA +++ +L PV+VL+LFKR+ +EDCE+L L+DRPEKLIIT+IAVPPI
Sbjct: 175 SAIAHTKESRAPISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPIS 234
Query: 182 IRPSVFTDGGARSNENDITARLSTIIRANAILRQEL--QCTDKSKCLADWDLLQVEVAQY 355
IRPSVFTD G +SNENDIT RL II+ANA LR EL +K L WD LQ VA Y
Sbjct: 235 IRPSVFTD-GLQSNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALY 293
Query: 356 INSDIRGIPLSMQSATPYRG 415
+NSD+R +P +++ P G
Sbjct: 294 MNSDVR-VPNNVEVGKPLSG 312
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 135 bits (341), Expect = 5e-30
Identities = 69/115 (60%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Frame = +2
Query: 44 NIVPVLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIPIRPSVFTDGGARSN 223
N L+ + V L + M DEDCELLY+HDRPEKL++T+I VPP IRPSVF DGG +SN
Sbjct: 207 NTTSTLDALFVFRLLRNMLDEDCELLYIHDRPEKLMVTNILVPPTAIRPSVFVDGGTQSN 266
Query: 224 ENDITARLSTIIRANAILRQELQCTD-KSKCLADWDLLQVEVAQYINSDIRGIPL 385
ENDIT RL II ANA L Q+L T+ K + W+ LQ+EVAQYINSD RG+PL
Sbjct: 267 ENDITERLKYIIEANANLSQQLLETNIYKKGVTSWETLQIEVAQYINSDTRGLPL 321
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 134 bits (338), Expect = 1e-29
Identities = 73/122 (59%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Frame = +2
Query: 5 SALSHKTVPRASVNIVPVLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIPI 184
SALSHK + S++ V L+P VL+LFKRM DEDCELL L DRPEKLIIT+IAVPP+PI
Sbjct: 198 SALSHKK-EKLSISSVHTLDPATVLSLFKRMTDEDCELLNLGDRPEKLIITEIAVPPVPI 256
Query: 185 RPSVFTDGGARSNENDITARLSTIIRANAILRQELQCTDK-SKCLADWDLLQVEVAQYIN 361
RPSVF GG SNE+ IT L I+ N+IL+ LQ D KC W LLQ++V +YIN
Sbjct: 257 RPSVFVGGGRMSNEDGITCILRNIVNTNSILKGILQNGDPLMKCFDCWQLLQLQVVEYIN 316
Query: 362 SD 367
SD
Sbjct: 317 SD 318
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 133 bits (335), Expect = 2e-29
Identities = 71/128 (55%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Frame = +2
Query: 8 ALSHKTVPRASVNIVPVLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIPIR 187
ALSHK + S++ V +L+P VL+LFKRM DEDCELL L DRPEKLI+T+IAVPP+PIR
Sbjct: 200 ALSHKK-EKLSISAVRMLDPAIVLSLFKRMTDEDCELLNLGDRPEKLIVTEIAVPPVPIR 258
Query: 188 PSVFTDGGARSNENDITARLSTIIRANAILRQELQCTDK-SKCLADWDLLQVEVAQYINS 364
PSVF GG SNE+ IT L +I N+IL++ LQ + KC W LQ++V +YINS
Sbjct: 259 PSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKCFDCWQHLQLQVVEYINS 318
Query: 365 DIRGIPLS 388
D +P S
Sbjct: 319 DAPSLPES 326
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 133 bits (335), Expect = 2e-29
Identities = 71/128 (55%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Frame = +2
Query: 8 ALSHKTVPRASVNIVPVLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIPIR 187
ALSHK + S++ V +L+P VL+LFKRM DEDCELL L DRPEKLI+T+IAVPP+PIR
Sbjct: 199 ALSHKK-EKLSISAVRMLDPAIVLSLFKRMTDEDCELLNLGDRPEKLIVTEIAVPPVPIR 257
Query: 188 PSVFTDGGARSNENDITARLSTIIRANAILRQELQCTDK-SKCLADWDLLQVEVAQYINS 364
PSVF GG SNE+ IT L +I N+IL++ LQ + KC W LQ++V +YINS
Sbjct: 258 PSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKCFDCWQHLQLQVVEYINS 317
Query: 365 DIRGIPLS 388
D +P S
Sbjct: 318 DAPSLPES 325
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 132 bits (333), Expect = 4e-29
Identities = 71/128 (55%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Frame = +2
Query: 8 ALSHKTVPRASVNIVPVLNPVRVLALFKRMADEDCELLYLHDRPEKLIITDIAVPPIPIR 187
ALSHK + S + V +L+P VL+LFKRM DEDCELL L DRPEKLI+T+IAVPP+PIR
Sbjct: 199 ALSHKK-EKLSFSAVHMLDPATVLSLFKRMTDEDCELLNLGDRPEKLIVTEIAVPPVPIR 257
Query: 188 PSVFTDGGARSNENDITARLSTIIRANAILRQELQCTDK-SKCLADWDLLQVEVAQYINS 364
PSVF GG SNE+ IT L +I N+IL++ LQ + KC W LQ++V +YINS
Sbjct: 258 PSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKCFDCWQHLQLQVVEYINS 317
Query: 365 DIRGIPLS 388
D +P S
Sbjct: 318 DAPSLPES 325