BLASTX nr result
ID: Cocculus22_contig00028690
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00028690
(270 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, p... 79 7e-13
gb|EXB66606.1| hypothetical protein L484_024902 [Morus notabilis] 78 1e-12
gb|EXB95576.1| hypothetical protein L484_016880 [Morus notabilis] 76 4e-12
gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Jap... 75 9e-12
ref|YP_588300.1| hypothetical protein ZeamMp038 [Zea mays subsp.... 74 2e-11
gb|AAL86511.1|AC099040_15 putative polyprotein [Oryza sativa Jap... 74 3e-11
gb|AAP52706.2| retrotransposon protein, putative, Ty3-gypsy subc... 74 3e-11
gb|AAV24920.1| putative polyprotein [Oryza sativa Japonica Group... 74 3e-11
gb|AAT77832.1| putative gag-pol precursor [Oryza sativa Japonica... 73 4e-11
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] 73 5e-11
gb|AAP53721.1| retrotransposon protein, putative, Ty3-gypsy subc... 73 5e-11
gb|EXC25012.1| hypothetical protein L484_021882 [Morus notabilis] 72 6e-11
gb|EXB29434.1| hypothetical protein L484_022105 [Morus notabilis] 72 6e-11
ref|NP_001172941.1| Os02g0455725 [Oryza sativa Japonica Group] g... 72 6e-11
gb|ABF96864.1| retrotransposon protein, putative, Ty3-gypsy subc... 72 6e-11
gb|AAL93080.1|AC093180_27 putative polyprotein [Oryza sativa Jap... 72 6e-11
gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subc... 72 1e-10
gb|AAU10841.1| putative polyprotein [Oryza sativa Japonica Group] 72 1e-10
emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa Japonica Group] g... 71 1e-10
emb|CAH66268.1| OSIGBa0136B09.4 [Oryza sativa Indica Group] 71 1e-10
>ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, partial [Amborella
trichopoda] gi|548833479|gb|ERM96088.1| hypothetical
protein AMTR_s04653p00000520, partial [Amborella
trichopoda]
Length = 563
Score = 79.0 bits (193), Expect = 7e-13
Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = -1
Query: 261 EPPSKRVRLE-QEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYK 85
E P K + E ++IVF ++D V PH D LVI +G V R LVDNGSS+++L+++
Sbjct: 244 ERPEKLFKRECEDIVFMESDARWVHHPHSDALVIVANIGGDNVHRILVDNGSSVNLLNFQ 303
Query: 84 AFKEMGYSNNQLVPVTAPLYGFTG 13
AFK+MG L P+T+ +YGFTG
Sbjct: 304 AFKQMGLQEKDLRPMTSSIYGFTG 327
>gb|EXB66606.1| hypothetical protein L484_024902 [Morus notabilis]
Length = 158
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = -1
Query: 228 EIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSNNQL 49
++ F + D GV FPH+D LV+E M+GN TV + LVDNGSS+D+L+ ++MG QL
Sbjct: 67 DVAFNEDDASGVHFPHNDALVVEAMIGNHTVCKILVDNGSSVDLLYSDCLEKMGIQKEQL 126
Query: 48 VPVTAPLYGFTG 13
+ LYGFTG
Sbjct: 127 EKTSRLLYGFTG 138
>gb|EXB95576.1| hypothetical protein L484_016880 [Morus notabilis]
Length = 289
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/74 (50%), Positives = 49/74 (66%)
Frame = -1
Query: 234 EQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSNN 55
E +I F++AD GV FP D LV+E M+GN TV R LVD+GSS+DIL+ ++G
Sbjct: 199 ETKITFSEADTNGVHFPKSDALVVEAMIGNHTVCRILVDSGSSVDILYTDCLDKIGIPQA 258
Query: 54 QLVPVTAPLYGFTG 13
+L T P+YGFTG
Sbjct: 259 RLQNNTQPMYGFTG 272
>gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Japonica Group]
Length = 1931
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = -1
Query: 261 EPPSKRVRLEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKA 82
+ P+++ L Q I F D EGV FPH DPLVI + F VRR LVD GSS D++ +A
Sbjct: 760 QQPARKKYLNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEA 819
Query: 81 FKEMGYSNNQLVPVTAPLYGFTG 13
+ MG L P L+GF G
Sbjct: 820 YATMGLPTQSLTPAPTSLHGFGG 842
>ref|YP_588300.1| hypothetical protein ZeamMp038 [Zea mays subsp. mays]
gi|40795086|gb|AAR91130.1| hypothetical protein
(mitochondrion) [Zea mays]
Length = 117
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/90 (42%), Positives = 54/90 (60%)
Frame = -1
Query: 270 LMVEPPSKRVRLEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILH 91
++++ KR R I F+D D EG++ PHDD +V+ + +G V+R LVD GSS DIL+
Sbjct: 5 IILQVDKKRPREGSVISFSDQDSEGIQRPHDDAIVLVLKIGGNRVKRVLVDTGSSADILY 64
Query: 90 YKAFKEMGYSNNQLVPVTAPLYGFTGVELR 1
+AF +M L V PL GFTG L+
Sbjct: 65 KRAFDQMNLELRHLGQVRTPLVGFTGDTLQ 94
>gb|AAL86511.1|AC099040_15 putative polyprotein [Oryza sativa Japonica Group]
Length = 1722
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/75 (49%), Positives = 45/75 (60%)
Frame = -1
Query: 237 LEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSN 58
L Q I F D EGV FPH DPLVI + F VRR LVD GSS D++ +A+ +MG ++
Sbjct: 514 LNQLIYFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLTS 573
Query: 57 NQLVPVTAPLYGFTG 13
L P A L GF G
Sbjct: 574 QALTPAPASLRGFGG 588
>gb|AAP52706.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1735
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/75 (49%), Positives = 45/75 (60%)
Frame = -1
Query: 237 LEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSN 58
L Q I F D EGV FPH DPLVI + F VRR LVD GSS D++ +A+ +MG ++
Sbjct: 527 LNQLIYFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLTS 586
Query: 57 NQLVPVTAPLYGFTG 13
L P A L GF G
Sbjct: 587 QALTPAPASLRGFGG 601
>gb|AAV24920.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55733857|gb|AAV59364.1| unknown protein [Oryza sativa
Japonica Group]
Length = 1279
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/75 (49%), Positives = 44/75 (58%)
Frame = -1
Query: 237 LEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSN 58
L Q I F D EGV FPH DPLVI + F VRR LVD GSS D++ +A+ +MG+
Sbjct: 628 LNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGFPT 687
Query: 57 NQLVPVTAPLYGFTG 13
L P A L GF G
Sbjct: 688 QALTPAPASLRGFGG 702
>gb|AAT77832.1| putative gag-pol precursor [Oryza sativa Japonica Group]
gi|108709121|gb|ABF96916.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1631
Score = 73.2 bits (178), Expect = 4e-11
Identities = 38/79 (48%), Positives = 45/79 (56%)
Frame = -1
Query: 237 LEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSN 58
L Q I F D EGV FPH DPLVI + F VRR LVD GSS D++ +A+ +MG
Sbjct: 530 LNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPT 589
Query: 57 NQLVPVTAPLYGFTGVELR 1
L P A L GF G +R
Sbjct: 590 QALTPAPASLRGFGGEAVR 608
>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 72.8 bits (177), Expect = 5e-11
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = -1
Query: 225 IVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSNNQLV 46
I FTD DLEG+ PH+DPLV+E+++ + V R L+D GSS+D++ M ++ Q+
Sbjct: 600 ISFTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQIK 659
Query: 45 PVTAPLYGFTG 13
PV+ PL GF G
Sbjct: 660 PVSKPLAGFDG 670
>gb|AAP53721.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1260
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/75 (49%), Positives = 44/75 (58%)
Frame = -1
Query: 237 LEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSN 58
L Q+I F D EGV FPH DPLVI + F VRR LVD GSS D++ +A+ +MG
Sbjct: 384 LNQQISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPT 443
Query: 57 NQLVPVTAPLYGFTG 13
L P A L GF G
Sbjct: 444 LALTPAPASLRGFGG 458
>gb|EXC25012.1| hypothetical protein L484_021882 [Morus notabilis]
Length = 539
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = -1
Query: 228 EIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSNNQL 49
++ F + D GV FPH+D LV+E ++GN TV LVDNGSS+D+L+ ++MG QL
Sbjct: 459 DVAFNEEDTNGVHFPHNDALVVEAIIGNHTVCIILVDNGSSVDLLYSDCLEKMGIPMEQL 518
Query: 48 VPVTAPLYGFTG 13
+ PLY F G
Sbjct: 519 EKTSRPLYRFAG 530
>gb|EXB29434.1| hypothetical protein L484_022105 [Morus notabilis]
Length = 363
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/72 (44%), Positives = 47/72 (65%)
Frame = -1
Query: 228 EIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSNNQL 49
++ F + D+ GV F H+D LV+E ++GN TV R LVDNGSS+ +L+ +++G QL
Sbjct: 180 DVTFNEEDVNGVHFSHNDALVVEAIIGNHTVCRILVDNGSSVGLLYADCLEKIGVPKEQL 239
Query: 48 VPVTAPLYGFTG 13
+ PLYGF G
Sbjct: 240 EKTSRPLYGFIG 251
>ref|NP_001172941.1| Os02g0455725 [Oryza sativa Japonica Group]
gi|255670866|dbj|BAH91670.1| Os02g0455725 [Oryza sativa
Japonica Group]
Length = 752
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/75 (49%), Positives = 43/75 (57%)
Frame = -1
Query: 237 LEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSN 58
L Q I F D EGV FPH DPLVI + F VRR LVD GSS D++ +A+ +MG
Sbjct: 424 LNQLISFRPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYAKMGLPT 483
Query: 57 NQLVPVTAPLYGFTG 13
L P A L GF G
Sbjct: 484 QALTPAPASLRGFGG 498
>gb|ABF96864.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 738
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/75 (46%), Positives = 45/75 (60%)
Frame = -1
Query: 237 LEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSN 58
L Q+I F D EGV FPH DPLVI + F VRR LVD G+S D++ +A+ +MG +
Sbjct: 586 LNQQISFRPGDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGTSADVIFAEAYAKMGLAT 645
Query: 57 NQLVPVTAPLYGFTG 13
L P A L F+G
Sbjct: 646 QALTPAPASLRRFSG 660
>gb|AAL93080.1|AC093180_27 putative polyprotein [Oryza sativa Japonica Group]
Length = 415
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/75 (46%), Positives = 45/75 (60%)
Frame = -1
Query: 237 LEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSN 58
L Q+I F D EGV FPH DPLVI + F VRR LVD G+S D++ +A+ +MG +
Sbjct: 263 LNQQISFRPGDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGTSADVIFAEAYAKMGLAT 322
Query: 57 NQLVPVTAPLYGFTG 13
L P A L F+G
Sbjct: 323 QALTPAPASLRRFSG 337
>gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2035
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/75 (48%), Positives = 42/75 (56%)
Frame = -1
Query: 237 LEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSN 58
L Q I F D EGV FPH DPLVI + F VRR LVD GSS D++ +A+ MG
Sbjct: 845 LNQLISFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVDGGSSADVIFAEAYATMGLPT 904
Query: 57 NQLVPVTAPLYGFTG 13
L P L+GF G
Sbjct: 905 QSLTPAPTSLHGFGG 919
>gb|AAU10841.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1528
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/75 (46%), Positives = 44/75 (58%)
Frame = -1
Query: 237 LEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSN 58
L Q+I F D EGV FPH DPLVI + F VRR LV+ GSS D++ +A+ +MG +
Sbjct: 482 LNQQIFFGPEDAEGVMFPHQDPLVISAEIAGFEVRRILVNGGSSADVIFAEAYAKMGLTT 541
Query: 57 NQLVPVTAPLYGFTG 13
L P L GF G
Sbjct: 542 QALTPALTSLRGFGG 556
>emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa Japonica Group]
gi|38343994|emb|CAD40359.2| OSJNBa0093P23.5 [Oryza sativa
Japonica Group]
Length = 2074
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/75 (46%), Positives = 44/75 (58%)
Frame = -1
Query: 237 LEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSN 58
+ Q I F D EGV FPH DPLVI + F VRR LVD GSS D+++ +A+ +MG
Sbjct: 1446 VNQLISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIYAEAYAKMGLPT 1505
Query: 57 NQLVPVTAPLYGFTG 13
L P L GF+G
Sbjct: 1506 QALTPALTSLRGFSG 1520
>emb|CAH66268.1| OSIGBa0136B09.4 [Oryza sativa Indica Group]
Length = 1348
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/75 (46%), Positives = 44/75 (58%)
Frame = -1
Query: 237 LEQEIVFTDADLEGVKFPHDDPLVIEMMVGNFTVRRALVDNGSSIDILHYKAFKEMGYSN 58
+ Q I F D EGV FPH DPLVI + F VRR LVD GSS D+++ +A+ +MG
Sbjct: 720 VNQLISFGPEDAEGVLFPHQDPLVISAEIAGFEVRRILVDGGSSADVIYAEAYAKMGLPT 779
Query: 57 NQLVPVTAPLYGFTG 13
L P L GF+G
Sbjct: 780 QALTPALTSLRGFSG 794