BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00028687
         (725 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containi...   296   5e-78
emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]   293   4e-77
ref|XP_006390316.1| hypothetical protein EUTSA_v10018358mg [Eutr...   247   3e-63
ref|XP_002889587.1| pentatricopeptide repeat-containing protein ...   241   1e-61
ref|NP_172104.1| mitochondrial editing factor 3 [Arabidopsis tha...   237   3e-60
ref|XP_006304009.1| hypothetical protein CARUB_v10011460mg [Caps...   236   6e-60
gb|ADE77588.1| unknown [Picea sitchensis]                             201   1e-50
gb|EXC06936.1| hypothetical protein L484_007616 [Morus notabilis]     196   7e-49
ref|XP_007214267.1| hypothetical protein PRUPE_ppa025121mg [Prun...   196   9e-49
ref|XP_002302824.2| hypothetical protein POPTR_0002s22590g [Popu...   198   2e-48
ref|XP_002322762.2| hypothetical protein POPTR_0016s06560g [Popu...   198   2e-48
ref|XP_006576932.1| PREDICTED: pentatricopeptide repeat-containi...   197   4e-48
ref|XP_006576931.1| PREDICTED: pentatricopeptide repeat-containi...   197   4e-48
ref|XP_006576930.1| PREDICTED: pentatricopeptide repeat-containi...   197   4e-48
ref|XP_003520593.1| PREDICTED: pentatricopeptide repeat-containi...   197   4e-48
gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossyp...   194   4e-48
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   196   7e-48
ref|XP_006469116.1| PREDICTED: uncharacterized protein LOC102612...   195   1e-47
ref|XP_007148792.1| hypothetical protein PHAVU_005G014700g [Phas...   195   1e-47
ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...   190   1e-47

>ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
            mitochondrial [Vitis vinifera]
            gi|298205230|emb|CBI17289.3| unnamed protein product
            [Vitis vinifera]
          Length = 688

 Score =  296 bits (758), Expect = 5e-78
 Identities = 139/219 (63%), Positives = 174/219 (79%)
 Frame = -1

Query: 722  MPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEEG 543
            +P++N FSW+ MIN FG+HGL  EA   F  MRS N +PNSVTFVS+LSACSHSGR+EEG
Sbjct: 377  IPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEG 436

Query: 542  WFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNACR 363
            W +F+ MSRDYGI P+EEHYACMVDLLGRAGK++EA +FI  MP +PGAS WGA+L ACR
Sbjct: 437  WSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACR 496

Query: 362  IHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVGF 183
            IH+  ELAE+V KKLL  E DQS VYV+LSNIYA  GMWEMVKKTR  + +K + KIVGF
Sbjct: 497  IHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGF 556

Query: 182  SSVEIEKKVYLFSANNKLKFWNTEAEGIWNALNAQCKLL 66
            +S+EIE+K+YLFS+ ++  + NT+ E +WN+L  + + L
Sbjct: 557  TSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMREL 595


>emb|CAN75184.1| hypothetical protein VITISV_001911 [Vitis vinifera]
          Length = 596

 Score =  293 bits (750), Expect = 4e-77
 Identities = 138/219 (63%), Positives = 174/219 (79%)
 Frame = -1

Query: 722 MPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEEG 543
           +P++N FSW+ MIN FG+HGL  EA   F  MRS N +PNSVTFVS+LSACSHSGR+EEG
Sbjct: 313 IPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEG 372

Query: 542 WFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNACR 363
           W +F+ MSRDYGI P+EEHYACMVDLLGRAGK++EA +FI  MP +PGAS WGA+L ACR
Sbjct: 373 WSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACR 432

Query: 362 IHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVGF 183
           IH+  ELAE+V KKLL  E DQS VYV+LSNIYA  GMWEMVKKTR  + +K + KIVGF
Sbjct: 433 IHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGLLKIVGF 492

Query: 182 SSVEIEKKVYLFSANNKLKFWNTEAEGIWNALNAQCKLL 66
           +S+EI++K+YLFS+ ++  + NT+ E +WN+L  + + L
Sbjct: 493 TSIEIKEKLYLFSSEDRFAYKNTQIESLWNSLKERMREL 531


>ref|XP_006390316.1| hypothetical protein EUTSA_v10018358mg [Eutrema salsugineum]
           gi|557086750|gb|ESQ27602.1| hypothetical protein
           EUTSA_v10018358mg [Eutrema salsugineum]
          Length = 556

 Score =  247 bits (630), Expect = 3e-63
 Identities = 118/186 (63%), Positives = 146/186 (78%)
 Frame = -1

Query: 725 VMPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEE 546
           VMP+RN  SW+ MINAFGI+G++ EA   FD M S+N +PNSVTFVS+LSACSHSG V+E
Sbjct: 370 VMPERNVISWSSMINAFGINGMFKEALDCFDKMISQNLVPNSVTFVSLLSACSHSGNVKE 429

Query: 545 GWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNAC 366
           GW  FELM+RDYGI P EEHYACMVDLLGRAG++ EA++FI+ MP++P  SVWGA+LNAC
Sbjct: 430 GWKQFELMTRDYGIVPEEEHYACMVDLLGRAGEIREAKSFIDSMPVKPMTSVWGALLNAC 489

Query: 365 RIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVG 186
           RIHKE +LAE++ +K    E D+SSVYVLLSNIYA  GMWEMV   R  +  K  +K +G
Sbjct: 490 RIHKEVDLAEEIAEKFFSMEPDESSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKPIG 549

Query: 185 FSSVEI 168
            S +E+
Sbjct: 550 LSGIEV 555


>ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335429|gb|EFH65846.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 558

 Score =  241 bits (616), Expect = 1e-61
 Identities = 117/185 (63%), Positives = 146/185 (78%)
 Frame = -1

Query: 725 VMPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEE 546
           +MPKRN  SW+ MINAFGI+GL+ EA   FD M+S+N +PNSVTFVS+LSACSHSG V+E
Sbjct: 372 MMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVKE 431

Query: 545 GWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNAC 366
           GW  FE M+RDYG+ P EEHYACMVDLLGRAG++ EA++FI+ MP++P AS WGA+L+AC
Sbjct: 432 GWKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSAC 491

Query: 365 RIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVG 186
           RIHKE +LA ++ +KLL  E D+SSVYVLLSNIYA  GMWEMV   R  +  K  +K +G
Sbjct: 492 RIHKEVDLAGEIAEKLLSMEPDESSVYVLLSNIYADAGMWEMVNCVRHKMGIKGYRKPMG 551

Query: 185 FSSVE 171
            S+ E
Sbjct: 552 LSATE 556



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 39/126 (30%), Positives = 58/126 (46%)
 Frame = -1

Query: 716 KRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEEGWF 537
           +RN   WT +I+ F       EA   F  M  E+ +PN  T  +IL +CS  G +  G  
Sbjct: 274 ERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESILPNHCTLAAILVSCSSLGSLRHGKS 333

Query: 536 YFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNACRIH 357
               M R+ GI     ++   +D   R G ++ A    + MP +   S W +M+NA  I+
Sbjct: 334 VHGYMIRN-GIEMDAVNFTSFIDTYARCGNIQMARKVFDMMPKRNVIS-WSSMINAFGIN 391

Query: 356 KEFELA 339
             FE A
Sbjct: 392 GLFEEA 397


>ref|NP_172104.1| mitochondrial editing factor 3 [Arabidopsis thaliana]
           gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g06140, mitochondrial; Flags: Precursor
           gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity
           to a hypothetical protein F24K9.13 gi|6006885 from
           Arabidopsis thaliana gb|AC008153 and contains multiple
           PPR PF|01535 repeats [Arabidopsis thaliana]
           gi|332189825|gb|AEE27946.1| mitochondrial editing factor
           3 [Arabidopsis thaliana]
          Length = 558

 Score =  237 bits (605), Expect = 3e-60
 Identities = 115/186 (61%), Positives = 146/186 (78%)
 Frame = -1

Query: 725 VMPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEE 546
           +MP+RN  SW+ MINAFGI+GL+ EA   F  M+S+N +PNSVTFVS+LSACSHSG V+E
Sbjct: 372 MMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKE 431

Query: 545 GWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNAC 366
           GW  FE M+RDYG+ P EEHYACMVDLLGRAG++ EA++FI+ MP++P AS WGA+L+AC
Sbjct: 432 GWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSAC 491

Query: 365 RIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVG 186
           RIHKE +LA ++ +KLL  E ++SSVYVLLSNIYA  GMWEMV   R  +  K  +K VG
Sbjct: 492 RIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVG 551

Query: 185 FSSVEI 168
            S+ E+
Sbjct: 552 QSATEV 557



 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 44/142 (30%), Positives = 65/142 (45%)
 Frame = -1

Query: 713 RNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEEGWFY 534
           RN   WT +I+ F       EAF  F  M  E+ +PN  T  +IL +CS  G +  G   
Sbjct: 275 RNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV 334

Query: 533 FELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNACRIHK 354
              M R+ GI     ++   +D+  R G ++ A    + MP +   S W +M+NA  I+ 
Sbjct: 335 HGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVIS-WSSMINAFGING 392

Query: 353 EFELAEKVTKKLLLCEVDQSSV 288
            FE A     K+    V  +SV
Sbjct: 393 LFEEALDCFHKMKSQNVVPNSV 414


>ref|XP_006304009.1| hypothetical protein CARUB_v10011460mg [Capsella rubella]
           gi|482572720|gb|EOA36907.1| hypothetical protein
           CARUB_v10011460mg [Capsella rubella]
          Length = 557

 Score =  236 bits (602), Expect = 6e-60
 Identities = 112/186 (60%), Positives = 146/186 (78%)
 Frame = -1

Query: 725 VMPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEE 546
           +MP+ N  SW+ MINAFGI+GL  +A   FD M+S+N +PNSVTFVS+LSACSHSG ++E
Sbjct: 371 MMPETNVISWSSMINAFGINGLLEKALDCFDKMKSQNLVPNSVTFVSLLSACSHSGNIKE 430

Query: 545 GWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNAC 366
           GW  FE M+R+YGI P EEHYACMVDLLGRAG++ EA++FI+ MP++  AS WGA+L+AC
Sbjct: 431 GWKQFESMTREYGITPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVEQMASAWGALLSAC 490

Query: 365 RIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVG 186
           RIHK+ +LAE++ +KLL  E D+SSVYVLL+NIYA  GMWEMV   R  +  K  +K VG
Sbjct: 491 RIHKKVDLAEEIAEKLLTVEPDKSSVYVLLANIYADAGMWEMVDCVRRKMAVKGYRKPVG 550

Query: 185 FSSVEI 168
            S++E+
Sbjct: 551 LSAIEV 556


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  201 bits (510), Expect(2) = 1e-50
 Identities = 97/192 (50%), Positives = 126/192 (65%)
 Frame = -1

Query: 722 MPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEEG 543
           M  +N  SW  MI  +G+HG   +A   F  M+     PN +TF+S+LSACSH+G V+EG
Sbjct: 1   MSNKNVVSWNAMIVGYGMHGHGEDALVLFTQMQQRGVKPNEITFISVLSACSHAGLVDEG 60

Query: 542 WFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNACR 363
           W  +  M+ DY I P  EHYACMVDLLGRAG + EA  FIEKMP++PGASVWGA L +CR
Sbjct: 61  WKCYNCMTLDYAITPTVEHYACMVDLLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCR 120

Query: 362 IHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVGF 183
           IH   EL E+V + LL  + D +  YVLLSNIYA  G W+ V K R  +++K V+K  G 
Sbjct: 121 IHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEKDVKKSPGC 180

Query: 182 SSVEIEKKVYLF 147
           S +E+  K++ F
Sbjct: 181 SLIEVNNKLHSF 192



 Score = 26.2 bits (56), Expect(2) = 1e-50
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 85  MPNVSFCLHDADV*VMEEMLCGHSWELA 2
           +P   F LHD +  + E ML  HS +LA
Sbjct: 222 VPCTDFVLHDVEEEIKENMLFAHSEKLA 249


>gb|EXC06936.1| hypothetical protein L484_007616 [Morus notabilis]
          Length = 734

 Score =  196 bits (498), Expect(2) = 7e-49
 Identities = 93/196 (47%), Positives = 131/196 (66%)
 Frame = -1

Query: 719  PKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEEGW 540
            P ++ F W+ MI  +G+HG   EA  ++  M     +PN VTF+++L+AC+HSG VEEGW
Sbjct: 425  PDKDVFVWSAMIVGYGLHGRGREAIDTYYAMEQAGVLPNDVTFLAVLTACNHSGLVEEGW 484

Query: 539  FYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNACRI 360
              F  M +DY I P  +HY+C+VDLLGRAG VE+A  FI KMP++PGASVWGA+LNAC I
Sbjct: 485  KLFHCM-KDYAIEPQNQHYSCVVDLLGRAGYVEKAYHFIMKMPIEPGASVWGAILNACMI 543

Query: 359  HKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVGFS 180
            H+  ++ E   +KL   +   +  YV LSNIYA   MW+ V KTRA +++K + K +G+S
Sbjct: 544  HRHVKIGEYAAEKLFSLDRSNTGYYVQLSNIYASARMWDCVAKTRAVMKRKGLSKDLGYS 603

Query: 179  SVEIEKKVYLFSANNK 132
            ++EI  K+  F   +K
Sbjct: 604  AIEINGKLQGFRVGDK 619



 Score = 25.0 bits (53), Expect(2) = 7e-49
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 85  MPNVSFCLHDADV*VMEEMLCGHSWELA 2
           +P+    LHD +    EE LC HS  +A
Sbjct: 644 VPHTESVLHDLNYEEKEETLCNHSERIA 671


>ref|XP_007214267.1| hypothetical protein PRUPE_ppa025121mg [Prunus persica]
            gi|462410132|gb|EMJ15466.1| hypothetical protein
            PRUPE_ppa025121mg [Prunus persica]
          Length = 796

 Score =  196 bits (497), Expect(2) = 9e-49
 Identities = 96/218 (44%), Positives = 140/218 (64%)
 Frame = -1

Query: 725  VMPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEE 546
            ++P ++  SWTV++  +G+HG   EA T+F+ MR     P+S++F+SIL ACSHSG ++E
Sbjct: 484  IIPIKDLISWTVIVAGYGMHGFGSEAITAFNEMRKSGIKPDSISFISILYACSHSGLLDE 543

Query: 545  GWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNAC 366
             W +F+ M  DY I P  EHYACMVDLL R G + +A  FI KMP++P A++WG++L  C
Sbjct: 544  AWRFFDSMRNDYSIVPKLEHYACMVDLLARTGNLTKAYKFINKMPIEPDATIWGSLLCGC 603

Query: 365  RIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVG 186
            RIH + +LAEKV +++   E + +  YVLL+NIYA    WE VKK R  I ++ ++K  G
Sbjct: 604  RIHHDVKLAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRQGLKKNPG 663

Query: 185  FSSVEIEKKVYLFSANNKLKFWNTEAEGIWNALNAQCK 72
             S +EI+ KV +F A N      T+ E +   L  + K
Sbjct: 664  CSWIEIKGKVQIFVAGNSSHPQATKIESLLKRLRLKMK 701



 Score = 25.0 bits (53), Expect(2) = 9e-49
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 82  PNVSFCLHDADV*VMEEMLCGHSWELA 2
           P + + L +AD    E  LCGHS +LA
Sbjct: 707 PKMQYALINADEMEKEVALCGHSEKLA 733


>ref|XP_002302824.2| hypothetical protein POPTR_0002s22590g [Populus trichocarpa]
           gi|550345610|gb|EEE82097.2| hypothetical protein
           POPTR_0002s22590g [Populus trichocarpa]
          Length = 647

 Score =  198 bits (503), Expect = 2e-48
 Identities = 96/197 (48%), Positives = 134/197 (68%)
 Frame = -1

Query: 722 MPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEEG 543
           M +RN  +W+ MI+ +G+HG   EA   FD M++    P+ +TFVSILSACSHSG V EG
Sbjct: 337 MQERNIITWSAMISGYGMHGWGREALNLFDQMKASVK-PDHITFVSILSACSHSGLVAEG 395

Query: 542 WFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNACR 363
           W  F  M+RD+G+ P  EHYACMVD+LGRAGK++EA  FIE+MP++P A+VWGA+L ACR
Sbjct: 396 WECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACR 455

Query: 362 IHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVGF 183
           IH   +LAE V + L   +   +  YV+L NIY +TG  +     R  ++ + V+KI G+
Sbjct: 456 IHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGY 515

Query: 182 SSVEIEKKVYLFSANNK 132
           S +EI+ K+Y F A ++
Sbjct: 516 SVIEIKNKLYAFVAGDR 532


>ref|XP_002322762.2| hypothetical protein POPTR_0016s06560g [Populus trichocarpa]
           gi|550320988|gb|EEF04523.2| hypothetical protein
           POPTR_0016s06560g [Populus trichocarpa]
          Length = 543

 Score =  198 bits (503), Expect = 2e-48
 Identities = 98/218 (44%), Positives = 134/218 (61%)
 Frame = -1

Query: 722 MPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEEG 543
           +P R+A SWT +I  F +HG   +A   F  M      P  +TF ++LSACSH G VE G
Sbjct: 232 LPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERG 291

Query: 542 WFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNACR 363
              FE M RDY I P  EHY CMVDLLGRAGK+ EAE F+ +MPM+P A +WGA+L ACR
Sbjct: 292 LELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACR 351

Query: 362 IHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVGF 183
           IHK  E+AE+  K L+  + + S  YVLLSNIYA T  WE V+  R  ++++ V K  G+
Sbjct: 352 IHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGY 411

Query: 182 SSVEIEKKVYLFSANNKLKFWNTEAEGIWNALNAQCKL 69
           +  E++ KV+ F+  +K      + E +W  +  + +L
Sbjct: 412 TLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRL 449


>ref|XP_006576932.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial-like isoform X4 [Glycine max]
          Length = 514

 Score =  197 bits (500), Expect = 4e-48
 Identities = 100/224 (44%), Positives = 144/224 (64%), Gaps = 6/224 (2%)
 Frame = -1

Query: 725 VMPKRNAFSWTVMINAFGIHGLYFEAFTSF------DCMRSENHIPNSVTFVSILSACSH 564
           +MP +N  SWT MIN F +HGLYF+A + F       C+ S  H+PNS+TF S+LSACSH
Sbjct: 290 MMPAKNVVSWTAMINGFAMHGLYFKALSIFYQMTQNSCVISGKHVPNSITFTSVLSACSH 349

Query: 563 SGRVEEGWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWG 384
           SG V+EG   F  M +DYGI+P EEH A M+ +L R G+ + A +F+  MP++PG +V G
Sbjct: 350 SGMVQEGLRIFNSM-KDYGISPTEEHCAYMIGVLARVGQFDAALSFLSNMPIKPGPNVLG 408

Query: 383 AMLNACRIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKS 204
            +L+ACR HK  ELAE++ K L   E +  S +  LSNIY+   MW +V+   A   ++ 
Sbjct: 409 VLLSACRFHKRVELAEEIAKTLSSLEHNDLSWHASLSNIYSDGRMWGVVEMAMA---EEG 465

Query: 203 VQKIVGFSSVEIEKKVYLFSANNKLKFWNTEAEGIWNALNAQCK 72
           + K +GFSS+E+  K+ LFS+N+ L F +T     WN+L+ + +
Sbjct: 466 LNKSLGFSSIEVRNKLCLFSSNDTLAFTSTNISHTWNSLSREMR 509


>ref|XP_006576931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial-like isoform X3 [Glycine max]
          Length = 516

 Score =  197 bits (500), Expect = 4e-48
 Identities = 100/224 (44%), Positives = 144/224 (64%), Gaps = 6/224 (2%)
 Frame = -1

Query: 725 VMPKRNAFSWTVMINAFGIHGLYFEAFTSF------DCMRSENHIPNSVTFVSILSACSH 564
           +MP +N  SWT MIN F +HGLYF+A + F       C+ S  H+PNS+TF S+LSACSH
Sbjct: 292 MMPAKNVVSWTAMINGFAMHGLYFKALSIFYQMTQNSCVISGKHVPNSITFTSVLSACSH 351

Query: 563 SGRVEEGWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWG 384
           SG V+EG   F  M +DYGI+P EEH A M+ +L R G+ + A +F+  MP++PG +V G
Sbjct: 352 SGMVQEGLRIFNSM-KDYGISPTEEHCAYMIGVLARVGQFDAALSFLSNMPIKPGPNVLG 410

Query: 383 AMLNACRIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKS 204
            +L+ACR HK  ELAE++ K L   E +  S +  LSNIY+   MW +V+   A   ++ 
Sbjct: 411 VLLSACRFHKRVELAEEIAKTLSSLEHNDLSWHASLSNIYSDGRMWGVVEMAMA---EEG 467

Query: 203 VQKIVGFSSVEIEKKVYLFSANNKLKFWNTEAEGIWNALNAQCK 72
           + K +GFSS+E+  K+ LFS+N+ L F +T     WN+L+ + +
Sbjct: 468 LNKSLGFSSIEVRNKLCLFSSNDTLAFTSTNISHTWNSLSREMR 511


>ref|XP_006576930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial-like isoform X2 [Glycine max]
          Length = 546

 Score =  197 bits (500), Expect = 4e-48
 Identities = 100/224 (44%), Positives = 144/224 (64%), Gaps = 6/224 (2%)
 Frame = -1

Query: 725 VMPKRNAFSWTVMINAFGIHGLYFEAFTSF------DCMRSENHIPNSVTFVSILSACSH 564
           +MP +N  SWT MIN F +HGLYF+A + F       C+ S  H+PNS+TF S+LSACSH
Sbjct: 322 MMPAKNVVSWTAMINGFAMHGLYFKALSIFYQMTQNSCVISGKHVPNSITFTSVLSACSH 381

Query: 563 SGRVEEGWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWG 384
           SG V+EG   F  M +DYGI+P EEH A M+ +L R G+ + A +F+  MP++PG +V G
Sbjct: 382 SGMVQEGLRIFNSM-KDYGISPTEEHCAYMIGVLARVGQFDAALSFLSNMPIKPGPNVLG 440

Query: 383 AMLNACRIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKS 204
            +L+ACR HK  ELAE++ K L   E +  S +  LSNIY+   MW +V+   A   ++ 
Sbjct: 441 VLLSACRFHKRVELAEEIAKTLSSLEHNDLSWHASLSNIYSDGRMWGVVEMAMA---EEG 497

Query: 203 VQKIVGFSSVEIEKKVYLFSANNKLKFWNTEAEGIWNALNAQCK 72
           + K +GFSS+E+  K+ LFS+N+ L F +T     WN+L+ + +
Sbjct: 498 LNKSLGFSSIEVRNKLCLFSSNDTLAFTSTNISHTWNSLSREMR 541


>ref|XP_003520593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
            mitochondrial-like isoform X1 [Glycine max]
          Length = 599

 Score =  197 bits (500), Expect = 4e-48
 Identities = 100/224 (44%), Positives = 144/224 (64%), Gaps = 6/224 (2%)
 Frame = -1

Query: 725  VMPKRNAFSWTVMINAFGIHGLYFEAFTSF------DCMRSENHIPNSVTFVSILSACSH 564
            +MP +N  SWT MIN F +HGLYF+A + F       C+ S  H+PNS+TF S+LSACSH
Sbjct: 375  MMPAKNVVSWTAMINGFAMHGLYFKALSIFYQMTQNSCVISGKHVPNSITFTSVLSACSH 434

Query: 563  SGRVEEGWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWG 384
            SG V+EG   F  M +DYGI+P EEH A M+ +L R G+ + A +F+  MP++PG +V G
Sbjct: 435  SGMVQEGLRIFNSM-KDYGISPTEEHCAYMIGVLARVGQFDAALSFLSNMPIKPGPNVLG 493

Query: 383  AMLNACRIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKS 204
             +L+ACR HK  ELAE++ K L   E +  S +  LSNIY+   MW +V+   A   ++ 
Sbjct: 494  VLLSACRFHKRVELAEEIAKTLSSLEHNDLSWHASLSNIYSDGRMWGVVEMAMA---EEG 550

Query: 203  VQKIVGFSSVEIEKKVYLFSANNKLKFWNTEAEGIWNALNAQCK 72
            + K +GFSS+E+  K+ LFS+N+ L F +T     WN+L+ + +
Sbjct: 551  LNKSLGFSSIEVRNKLCLFSSNDTLAFTSTNISHTWNSLSREMR 594


>gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  194 bits (492), Expect(2) = 4e-48
 Identities = 94/197 (47%), Positives = 132/197 (67%)
 Frame = -1

Query: 725  VMPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEE 546
            ++P ++  SWTVMI+ +G+HG   EA  +F+ MR     P+ V+F+SIL ACSHSG +E+
Sbjct: 492  MIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQ 551

Query: 545  GWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNAC 366
            GW +F +M  D+ I P  EHYACMVDLL R G + +A  FIE +P+ P A++WGA+L  C
Sbjct: 552  GWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGC 611

Query: 365  RIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVG 186
            RI+ + ELAEKV +++   E + +  YVLL+NIYA    WE VK+ R  I KK ++K  G
Sbjct: 612  RIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPG 671

Query: 185  FSSVEIEKKVYLFSANN 135
             S +EI+ KV LF + N
Sbjct: 672  CSWIEIKGKVNLFVSGN 688



 Score = 24.6 bits (52), Expect(2) = 4e-48
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 82  PNVSFCLHDADV*VMEEMLCGHSWELA 2
           P   + L +AD    E  LCGHS +LA
Sbjct: 716 PKTKYALINADEMQKEMALCGHSEKLA 742


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Vitis vinifera]
          Length = 849

 Score =  196 bits (498), Expect = 7e-48
 Identities = 94/193 (48%), Positives = 128/193 (66%)
 Frame = -1

Query: 725  VMPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEE 546
            +M +R+  +W  MI+ +G HGL   A   F+ M+ E   PN VTF+ +LSACSHSG VEE
Sbjct: 538  MMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEE 597

Query: 545  GWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNAC 366
            G+ YF  M +DYG+ P  +HY  MVDLLGRA ++ EA  FI+KMP++P  SV+GAML AC
Sbjct: 598  GFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGAC 657

Query: 365  RIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVG 186
            RIHK  EL EK   ++   + D    +VLL+NIYA   MW+ V + R T+ KK +QK  G
Sbjct: 658  RIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPG 717

Query: 185  FSSVEIEKKVYLF 147
            +S VE++ +V+ F
Sbjct: 718  WSVVELQNEVHTF 730


>ref|XP_006469116.1| PREDICTED: uncharacterized protein LOC102612526 [Citrus sinensis]
          Length = 1508

 Score =  195 bits (496), Expect = 1e-47
 Identities = 94/197 (47%), Positives = 133/197 (67%)
 Frame = -1

Query: 722  MPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEEG 543
            M ++N  SW+ MI+ +G+HG   EA   FD M++    P+ +TFVS+LSACSH+G ++EG
Sbjct: 862  MKQKNVISWSTMISGYGMHGHGREALFLFDQMKALIK-PDHITFVSVLSACSHAGLIDEG 920

Query: 542  WFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNACR 363
            W  F  M RD+G+ P  EHYACMVD+LGRAGK+ EA  FIE+MP++P A VWG++L ACR
Sbjct: 921  WECFNSMLRDFGVAPRPEHYACMVDMLGRAGKLNEAREFIERMPIRPDAGVWGSLLGACR 980

Query: 362  IHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVGF 183
            IH   ELAE   K L   + +    YV+LSNIYA +G      + RA ++++ V+KI G 
Sbjct: 981  IHSNVELAEMAAKALFDLDAENPGRYVILSNIYASSGKRTEADRIRALMKRRGVKKITGH 1040

Query: 182  SSVEIEKKVYLFSANNK 132
            + +EI+ KV+ F A ++
Sbjct: 1041 TVIEIKNKVHTFVAGDR 1057


>ref|XP_007148792.1| hypothetical protein PHAVU_005G014700g [Phaseolus vulgaris]
            gi|561022056|gb|ESW20786.1| hypothetical protein
            PHAVU_005G014700g [Phaseolus vulgaris]
          Length = 814

 Score =  195 bits (496), Expect = 1e-47
 Identities = 92/193 (47%), Positives = 130/193 (67%)
 Frame = -1

Query: 725  VMPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEE 546
            +M +R+  +W  MI+A+G HG   EA   FD M+  +  PN +TF+S+++ACSHSG VEE
Sbjct: 503  MMEERHVITWNAMIDAYGTHGHGKEALDLFDDMQKGSVKPNEITFLSVIAACSHSGLVEE 562

Query: 545  GWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNAC 366
            G +YFE M  +YG+ P  +HY  MVDLLGRAG++++A  FI+ MP++PG SV GAML AC
Sbjct: 563  GLYYFESMKENYGLRPSMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGISVLGAMLGAC 622

Query: 365  RIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVG 186
            +IHK  EL EKV  +L   + D+   +VLL+N+YA   MWE V + R  + KK ++K  G
Sbjct: 623  KIHKNVELGEKVADELFELDPDEGGYHVLLANMYASASMWEKVARVRTAMEKKGIKKTPG 682

Query: 185  FSSVEIEKKVYLF 147
             S VE+  +V+ F
Sbjct: 683  CSLVELRNEVHTF 695


>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  190 bits (482), Expect(2) = 1e-47
 Identities = 89/193 (46%), Positives = 126/193 (65%)
 Frame = -1

Query: 725  VMPKRNAFSWTVMINAFGIHGLYFEAFTSFDCMRSENHIPNSVTFVSILSACSHSGRVEE 546
            +MP+R+  SW VMI+ +G+HG   +A   F   R+    PN +TF ++LSACSHSG +EE
Sbjct: 660  LMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEE 719

Query: 545  GWFYFELMSRDYGINPLEEHYACMVDLLGRAGKVEEAEAFIEKMPMQPGASVWGAMLNAC 366
            GW YF++M  +Y ++P  E YACMVDLL RAG+  E   FIEKMP +P A+VWG++L AC
Sbjct: 720  GWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGAC 779

Query: 365  RIHKEFELAEKVTKKLLLCEVDQSSVYVLLSNIYAMTGMWEMVKKTRATIRKKSVQKIVG 186
            RIH   +LAE   + L   E   S  YVL++NIY+  G WE   K R  ++++ V K  G
Sbjct: 780  RIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPG 839

Query: 185  FSSVEIEKKVYLF 147
             S +E+++K++ F
Sbjct: 840  CSWIEVKRKLHSF 852



 Score = 26.9 bits (58), Expect(2) = 1e-47
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 85  MPNVSFCLHDADV*VMEEMLCGHSWELA 2
           +P+ +F L D D    E  LCGHS ++A
Sbjct: 882 VPDTNFVLQDVDEDEKEFSLCGHSEKIA 909