BLASTX nr result

ID: Cocculus22_contig00028585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00028585
         (335 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...   133   3e-29
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...   133   3e-29
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...   130   2e-28
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no...   129   6e-28
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              129   6e-28
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   129   6e-28
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   128   7e-28
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   128   7e-28
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...   125   5e-27
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus...   125   8e-27
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...   124   1e-26
ref|XP_006836567.1| hypothetical protein AMTR_s00131p00068700 [A...   120   3e-25
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   119   3e-25
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope...   119   3e-25
ref|XP_002299208.2| DNA-directed RNA polymerase alpha subunit fa...   119   4e-25
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise...   119   4e-25
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   114   1e-23
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   114   1e-23
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub...   114   2e-23
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   113   3e-23

>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
           [Theobroma cacao] gi|508727914|gb|EOY19811.1|
           DNA-directed RNA polymerase E subunit 1, putative
           isoform 3 [Theobroma cacao]
          Length = 1675

 Score =  133 bits (334), Expect = 3e-29
 Identities = 62/111 (55%), Positives = 88/111 (79%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG KE LN F+SLQPLLMEN+F EG S++L+DF + + V+++IQ ++Q +SPLL  +RS 
Sbjct: 593 KGPKEVLNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRST 652

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y+EL+ +Q++N ++  K PV NFIL  SAL DLID+KS+S++ KVVQQ+GF
Sbjct: 653 YNELVGLQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGF 703


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
           [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
           DNA-directed RNA polymerase E subunit 1, putative
           isoform 1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
           DNA-directed RNA polymerase E subunit 1, putative
           isoform 1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
           DNA-directed RNA polymerase E subunit 1, putative
           isoform 1 [Theobroma cacao]
          Length = 1788

 Score =  133 bits (334), Expect = 3e-29
 Identities = 62/111 (55%), Positives = 88/111 (79%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG KE LN F+SLQPLLMEN+F EG S++L+DF + + V+++IQ ++Q +SPLL  +RS 
Sbjct: 593 KGPKEVLNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRST 652

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y+EL+ +Q++N ++  K PV NFIL  SAL DLID+KS+S++ KVVQQ+GF
Sbjct: 653 YNELVGLQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGF 703


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
           vesca subsp. vesca]
          Length = 1991

 Score =  130 bits (326), Expect = 2e-28
 Identities = 63/111 (56%), Positives = 89/111 (80%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           K +++ L+ FNS+QPLLMEN+F EG S+ L+DF +P++ ++DIQ  ++ +SPLL  MR+ 
Sbjct: 591 KSAEDVLSFFNSMQPLLMENLFSEGFSVGLEDFALPRASIQDIQKGLKEISPLLFHMRTV 650

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y+EL+EMQL+N ++ VK PV NFIL  SAL DLID+KS+S++ KVVQQVGF
Sbjct: 651 YNELVEMQLENHIRKVKEPVSNFILNSSALGDLIDSKSDSAMNKVVQQVGF 701


>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
          Length = 2054

 Score =  129 bits (323), Expect = 6e-28
 Identities = 63/111 (56%), Positives = 88/111 (79%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KGS+E L  FN+LQPLLMENIF +G S+ L+DF I + V+++I  ++Q +SPLL  +RS 
Sbjct: 596 KGSEEVLKFFNALQPLLMENIFAQGFSVGLEDFSISQEVIKNITKDIQLISPLLYHLRST 655

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y+EL+E+QL+NQ++  K PV NFILK S++ +LID KS+S+I KVVQQ+GF
Sbjct: 656 YNELVELQLENQIRFAKAPVTNFILKSSSMGNLIDPKSDSAINKVVQQIGF 706


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  129 bits (323), Expect = 6e-28
 Identities = 64/111 (57%), Positives = 85/111 (76%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG  E L  F+SLQPLLMEN+F EG S++L+DF IP  V ++IQ NV+ +S LL  +RS 
Sbjct: 652 KGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSLLYNLRSM 711

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y+ELL++Q +N L+  K+PV NFIL  SAL +LID+KS+S+I KVVQQ+GF
Sbjct: 712 YNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGF 762


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  129 bits (323), Expect = 6e-28
 Identities = 64/111 (57%), Positives = 85/111 (76%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG  E L  F+SLQPLLMEN+F EG S++L+DF IP  V ++IQ NV+ +S LL  +RS 
Sbjct: 592 KGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSLLYNLRSM 651

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y+ELL++Q +N L+  K+PV NFIL  SAL +LID+KS+S+I KVVQQ+GF
Sbjct: 652 YNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGF 702


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
           sativus]
          Length = 1959

 Score =  128 bits (322), Expect = 7e-28
 Identities = 63/111 (56%), Positives = 87/111 (78%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG +E L  F+SLQPLLME+IF EG S+ L D+ +P + ++ +Q N+Q +SPLL  +RS 
Sbjct: 592 KGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRST 651

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           ++EL+E+QL+N L+SVK+P  NFILKLS+L  L D+KSES+I KVVQQ+GF
Sbjct: 652 FNELVELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGF 702


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
           subunit 1-like [Cucumis sativus]
          Length = 2019

 Score =  128 bits (322), Expect = 7e-28
 Identities = 63/111 (56%), Positives = 87/111 (78%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG +E L  F+SLQPLLME+IF EG S+ L D+ +P + ++ +Q N+Q +SPLL  +RS 
Sbjct: 622 KGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLRST 681

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           ++EL+E+QL+N L+SVK+P  NFILKLS+L  L D+KSES+I KVVQQ+GF
Sbjct: 682 FNELVELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGF 732


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
           gi|462415343|gb|EMJ20080.1| hypothetical protein
           PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  125 bits (315), Expect = 5e-27
 Identities = 61/111 (54%), Positives = 87/111 (78%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG ++ L  F+SLQPLLMEN+F EG S+ L+DF + ++ ++DIQ N+Q  S LL  +RS 
Sbjct: 595 KGGEDVLKFFDSLQPLLMENLFSEGFSVGLEDFYMSRTSIQDIQKNIQDSSDLLYHLRST 654

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y+E +E QL N+++SVK+PV +FIL+ SAL DLID+KS+S+I K+VQQ+GF
Sbjct: 655 YNEFVEFQLQNRIRSVKVPVSHFILESSALGDLIDSKSDSAINKIVQQIGF 705


>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
          Length = 2113

 Score =  125 bits (313), Expect = 8e-27
 Identities = 59/111 (53%), Positives = 86/111 (77%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG +E +  FNS+QPLLMEN++ EG S++L++F +P  V+E IQ N+Q +SPLL  +R+ 
Sbjct: 592 KGPEEVIRFFNSIQPLLMENLYTEGFSVSLREFFLPLDVLESIQENLQKISPLLFHLRAS 651

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y E + +Q+DN L++VK+PV NF+ K SA+  LID+KSES++ KVVQQ+GF
Sbjct: 652 YSESIALQIDNYLRNVKIPVTNFV-KSSAVGRLIDSKSESALSKVVQQIGF 701


>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score =  124 bits (312), Expect = 1e-26
 Identities = 59/111 (53%), Positives = 86/111 (77%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           K  K+AL+ F+SLQPLLMEN+F EG S++L DF  PKS +++IQ N+Q +SPLL  +RS 
Sbjct: 393 KSPKDALDFFDSLQPLLMENLFSEGFSVSLHDFFFPKSELQNIQRNIQDLSPLLLQLRSS 452

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           ++EL+++Q +N ++  K PV NFIL  SAL  +ID++S+S+I K+VQQ+GF
Sbjct: 453 FNELVQVQFENHIREFKSPVGNFILISSALGSMIDSRSDSAIDKIVQQIGF 503


>ref|XP_006836567.1| hypothetical protein AMTR_s00131p00068700 [Amborella trichopoda]
           gi|548839106|gb|ERM99420.1| hypothetical protein
           AMTR_s00131p00068700 [Amborella trichopoda]
          Length = 1916

 Score =  120 bits (300), Expect = 3e-25
 Identities = 60/111 (54%), Positives = 79/111 (71%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG KEAL VFNSLQPL ME +F+EG SI L DF +PK +M+ I+  ++ +SPLL  MRS 
Sbjct: 602 KGPKEALKVFNSLQPLFMEILFMEGYSIGLGDFNVPKPIMDHIKSKIKSISPLLKHMRST 661

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
            +EL+E Q+   L   KLP+V FILK S+L  LID+ S  ++ KVV+Q+GF
Sbjct: 662 DNELIESQVAKSLDDAKLPIVKFILKSSSLGGLIDSSSSQAVNKVVEQIGF 712


>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
           subunit 1 [Solanum lycopersicum]
          Length = 1632

 Score =  119 bits (299), Expect = 3e-25
 Identities = 59/111 (53%), Positives = 84/111 (75%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG  + L  FNSLQPLLMEN+  EG SI+L+DF + K+V + IQ  +Q +S LL+ +RS 
Sbjct: 593 KGPNDVLKFFNSLQPLLMENLCTEGFSISLRDFYMTKAVRDGIQERIQCMSKLLHHLRSS 652

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y+E +E+QL++ L++ KLPV++F+LK S +  LID+KSES+  KVVQQ+GF
Sbjct: 653 YNESVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESAFNKVVQQIGF 703


>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1127

 Score =  119 bits (299), Expect = 3e-25
 Identities = 59/111 (53%), Positives = 84/111 (75%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG  + L  FNSLQPLLMEN+  EG SI+L+DF + K+V + IQ  +Q +S LL+ +RS 
Sbjct: 144 KGPNDVLKFFNSLQPLLMENLCTEGFSISLRDFYMTKAVRDGIQERIQCMSKLLHHLRSS 203

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y+E +E+QL++ L++ KLPV++F+LK S +  LID+KSES+  KVVQQ+GF
Sbjct: 204 YNESVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESAFNKVVQQIGF 254


>ref|XP_002299208.2| DNA-directed RNA polymerase alpha subunit family protein [Populus
           trichocarpa] gi|550346661|gb|EEE84013.2| DNA-directed
           RNA polymerase alpha subunit family protein [Populus
           trichocarpa]
          Length = 842

 Score =  119 bits (298), Expect = 4e-25
 Identities = 59/111 (53%), Positives = 84/111 (75%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KGS   L  FN+LQPLLMEN+F EG S++LKDF I ++V + IQ + + +SPLL  +RS 
Sbjct: 512 KGSGAVLKFFNALQPLLMENLFSEGFSVSLKDFSISQAVKQSIQESFKVISPLLCNLRST 571

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y+EL+E+Q++N ++ VK PV+ FIL  SAL  LID+KS+ ++ K+VQQ+GF
Sbjct: 572 YNELVELQVENHIQDVKTPVLEFILTSSALGYLIDSKSDGAVAKLVQQIGF 622


>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score =  119 bits (298), Expect = 4e-25
 Identities = 57/111 (51%), Positives = 81/111 (72%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG K+ L  FNS+QPLLME++  EG S++LKDF +P+ V+E I+ N+Q +SPLL+ +R  
Sbjct: 591 KGPKDVLGFFNSVQPLLMESLQAEGFSVSLKDFFLPREVLEGIRENIQKISPLLSHLRDH 650

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y E + +QL++ L SVK PV  FI+  SA+  L D++SES + KVVQQ+GF
Sbjct: 651 YSESIALQLESYLSSVKTPVTEFIVNSSAIGFLTDSRSESGLSKVVQQIGF 701


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
           max]
          Length = 2082

 Score =  114 bits (285), Expect = 1e-23
 Identities = 56/111 (50%), Positives = 83/111 (74%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KG KEALN F+ LQP LME++F EG S++L++F I +++   I+ ++  VS LL  +RS 
Sbjct: 596 KGPKEALNFFDVLQPFLMESLFAEGFSVSLEEFSISRAIKRIIRKSIGKVSSLLYQLRSL 655

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y+EL+  QL+  ++ V+LP++NF LK + L DLID+KS+S+I KVVQQ+GF
Sbjct: 656 YNELVAQQLEKHIRDVELPIINFALKSTKLGDLIDSKSKSAIDKVVQQIGF 706


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
           gi|550343552|gb|EEE78905.2| hypothetical protein
           POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  114 bits (285), Expect = 1e-23
 Identities = 57/111 (51%), Positives = 83/111 (74%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           KGS   L  FNSLQP+LMEN+F EG S++L+DF I ++V + I  + + +SPLL  +RS 
Sbjct: 598 KGSGAVLKFFNSLQPMLMENLFSEGFSVSLEDFSISRAVKQRIPESFKAISPLLCNLRST 657

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           ++EL+E+Q++N ++ VK PV  FIL  SAL  LID+KS++++ KVVQQ+GF
Sbjct: 658 FNELVELQVENHIRDVKQPVREFILTSSALGYLIDSKSDAAVTKVVQQIGF 708


>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
           arietinum]
          Length = 2263

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/111 (50%), Positives = 80/111 (72%)
 Frame = +1

Query: 1   KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
           +G KEALN F+ LQP LMENIF  G S+ L+DF I ++V   I  ++  +SPLL+ +R  
Sbjct: 596 QGPKEALNFFDVLQPFLMENIFAHGYSVGLQDFSISRAVKRVINRSIGKISPLLHQLRVV 655

Query: 181 YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
           Y EL+  QL+  ++ ++LPV+NF LK + L DLID+KS+S++ KVVQQ+GF
Sbjct: 656 YKELVAQQLEKHMQDIELPVINFALKSTKLGDLIDSKSKSALDKVVQQIGF 706


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/111 (49%), Positives = 79/111 (71%)
 Frame = +1

Query: 1    KGSKEALNVFNSLQPLLMENIFLEGCSITLKDFIIPKSVMEDIQMNVQGVSPLLNAMRSG 180
            KG +EALN F+ +QP LMENIF  G S+ L+DF I ++V   I  ++  VSPLL  +R  
Sbjct: 678  KGPQEALNFFDVIQPFLMENIFAHGFSVGLQDFSISRAVKRVINRSIGKVSPLLRQLRGM 737

Query: 181  YDELLEMQLDNQLKSVKLPVVNFILKLSALADLIDAKSESSIGKVVQQVGF 333
            Y EL+  QL+  ++ ++LPV+NF LK + L DLID+KS+S++ KV+QQ+GF
Sbjct: 738  YKELVAQQLEKVIQDIELPVINFALKSTKLGDLIDSKSKSAVDKVIQQIGF 788


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