BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00028389
         (435 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]    71   1e-10
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    70   2e-10
emb|CAN75996.1| hypothetical protein VITISV_022989 [Vitis vinifera]    67   3e-09
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               66   4e-09
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...    65   8e-09
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                   65   8e-09
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]    65   8e-09
emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]    65   8e-09
ref|XP_006596771.1| PREDICTED: uncharacterized mitochondrial pro...    65   1e-08
ref|XP_006596677.1| PREDICTED: uncharacterized mitochondrial pro...    65   1e-08
gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subc...    65   1e-08
gb|AAB82754.1| retrofit [Oryza longistaminata]                         65   1e-08
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                   64   2e-08
emb|CAN80750.1| hypothetical protein VITISV_017861 [Vitis vinifera]    64   2e-08
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...    64   2e-08
emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]    64   2e-08
emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]         64   2e-08
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]    64   3e-08
emb|CAN65555.1| hypothetical protein VITISV_009833 [Vitis vinifera]    64   3e-08
ref|XP_006603141.1| PREDICTED: uncharacterized mitochondrial pro...    63   5e-08

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 45/101 (44%), Positives = 54/101 (53%), Gaps = 23/101 (22%)
 Frame = +3

Query: 177  SLKDLGVIHYFLEF----------------------KLRRLKLVSFYLPMTGGEKLYPYG 290
            +LKDLG I YFL                        K + L + S   PM   + L   G
Sbjct: 1102 ALKDLGDIDYFLGIQVKHTSAGMHLSQAKYISNLLQKTKMLHVKSVPTPMVSNQSLSNSG 1161

Query: 291  S-PFHDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP 410
            S PF + QLYRS VGALQY TITRP+++YSVNRV Q+MQ P
Sbjct: 1162 SAPFSNTQLYRSTVGALQYATITRPDITYSVNRVCQFMQDP 1202


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 48/111 (43%), Positives = 60/111 (54%), Gaps = 27/111 (24%)
 Frame = +3

Query: 177  SLKDLGVIHYFLEFK-------------------LRRLKLVSFY---LPMTGGEKL-YPY 287
            SLKDLG +HYFL  +                   L++ K+V       P+  G KL    
Sbjct: 1156 SLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGD 1215

Query: 288  GSPFHDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP----WVLIGR 428
            G P  DL  YRS VGALQY+TITRPELS+SVN+V Q+MQ P    W ++ R
Sbjct: 1216 GDPVEDLHGYRSTVGALQYVTITRPELSFSVNKVCQFMQNPTEEHWKVVKR 1266


>emb|CAN75996.1| hypothetical protein VITISV_022989 [Vitis vinifera]
          Length = 274

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 23/101 (22%)
 Frame = +3

Query: 177 SLKDLGVIHYFLEFKLR---------RLKLVSFYL-------------PMTGGEKLYPYG 290
           +LKDLG + YFL  ++R         + K +   L             PMT G KL  Y 
Sbjct: 111 TLKDLGEVDYFLGIQVRHTTEGLYLSQTKYIKDLLCKAKMQFSESSNTPMTSGLKLSAYR 170

Query: 291 S-PFHDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP 410
           S P  + +LYR++VGALQY+TITR ++SY VNRV Q+MQ P
Sbjct: 171 SDPIENERLYRNIVGALQYVTITRLKISYCVNRVCQFMQNP 211


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 27/111 (24%)
 Frame = +3

Query: 177  SLKDLGVIHYFLEFK-------------------LRRLKLVS---FYLPMTGGEKLYPY- 287
            S+KDLG +HYFL  +                   L++ KL     +  P+  G+KL  Y 
Sbjct: 1093 SMKDLGSVHYFLGIETVYNGDHLHLTQHKYIVDLLKKTKLHDSRPYPTPVLSGKKLSVYD 1152

Query: 288  GSPFHDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP----WVLIGR 428
            G    D   YRS+VGALQY+T+TRP++ Y+VN+V Q+M  P    WV + R
Sbjct: 1153 GVKLEDPSEYRSIVGALQYLTLTRPDICYAVNQVCQFMHSPTNVHWVAVKR 1203


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 29/113 (25%)
 Frame = +3

Query: 177  SLKDLGVIHYFLEFKLRR----------------LKLVSFY------LPMTGGEKLYPY- 287
            +LKDLG +HYFL  ++ +                LK V+         P++  EKL  Y 
Sbjct: 1159 TLKDLGDLHYFLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCKPVSTPLSVSEKLTLYE 1218

Query: 288  GSPF--HDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP----WVLIGR 428
            GSP   +D   YRS+VGALQY+T+TRP+++YSVN+V Q++  P    W+ + R
Sbjct: 1219 GSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKR 1271


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 29/113 (25%)
 Frame = +3

Query: 177  SLKDLGVIHYFLEFKLRR----------------LKLVSFY------LPMTGGEKLYPY- 287
            +LKDLG +HYFL  ++ +                LK V+         P++  EKL  Y 
Sbjct: 1159 TLKDLGDLHYFLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCTPVSTPLSVSEKLTLYE 1218

Query: 288  GSPF--HDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP----WVLIGR 428
            GSP   +D   YRS+VGALQY+T+TRP+++YSVN+V Q++  P    W+ + R
Sbjct: 1219 GSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKR 1271


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 24/102 (23%)
 Frame = +3

Query: 177  SLKDLGVIHYFLEFKLRRLKLVSFYL-----------------------PMTGGEKLYP- 284
            SLKDLG + YFL  ++++      +L                       PM  G KL   
Sbjct: 968  SLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSAG 1027

Query: 285  YGSPFHDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP 410
             G P  ++  YRSVVGALQY+TITRPE+++SVN+V Q+MQ+P
Sbjct: 1028 MGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKP 1069


>emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]
          Length = 846

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 43/101 (42%), Positives = 52/101 (51%), Gaps = 23/101 (22%)
 Frame = +3

Query: 177 SLKDLGVIHYFLEFK---------LRRLKLVSFYLPMTGGEKLYPYGSPF---------- 299
           SLKDLG +HYFL  +         L + K +   L  T      P  +P           
Sbjct: 672 SLKDLGKVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTSLKLRAGD 731

Query: 300 ----HDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP 410
                DL  YRS VGALQY+TITRPELS+SVN+V Q+MQ P
Sbjct: 732 GDLVEDLHGYRSTVGALQYVTITRPELSFSVNKVCQFMQNP 772


>ref|XP_006596771.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Glycine max]
          Length = 176

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 24/102 (23%)
 Frame = +3

Query: 177 SLKDLGVIHYFLEFKLRRLKLVSFYL-----------------------PMTGGEKLYPY 287
           SLK LG + YFL  K++ L   S  +                       PM    KL  +
Sbjct: 71  SLKQLGHLDYFLGLKIKYLPNSSILMTQTKYIRDLLHKTNMAEAHSISSPMVSNCKLSRH 130

Query: 288 GS-PFHDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP 410
           G+  FHD  LYRSVVGALQY T+TRPE+S+ VN+V Q+M  P
Sbjct: 131 GANAFHDPTLYRSVVGALQYATLTRPEISFVVNKVCQFMAAP 172


>ref|XP_006596677.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Glycine max]
          Length = 223

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 22/100 (22%)
 Frame = +3

Query: 177 SLKDLGVIHYFLEFK-------------------LRRLKLVS---FYLPMTGGEKLYPYG 290
           ++KDLG + YFL  +                   L R K++      +P+  G +L   G
Sbjct: 115 AIKDLGRLSYFLGLEVHYGANDIFLSQSKYAHDILDRAKVLDAKPIAMPLASGIQLTSTG 174

Query: 291 SPFHDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP 410
            PF D  LY S+VGALQY+TITRP+LSY VN V Q++Q P
Sbjct: 175 DPFPDPTLYCSLVGALQYLTITRPDLSYVVNSVSQFLQAP 214


>gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 825

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 29/113 (25%)
 Frame = +3

Query: 177 SLKDLGVIHYFLEFKLRR----------------LKLVSFY------LPMTGGEKLYPY- 287
           +LKDLG +HYFL  ++ +                LK V+         P++  EKL  Y 
Sbjct: 637 ALKDLGDLHYFLGIEVTKVSNGILLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYE 696

Query: 288 GSPF--HDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP----WVLIGR 428
           GSP   +D   YRS+VGALQY+T+TRP+++YSVN+V Q++  P    W ++ R
Sbjct: 697 GSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTVVKR 749


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 29/113 (25%)
 Frame = +3

Query: 177  SLKDLGVIHYFLEFKLRR----------------LKLVSFY------LPMTGGEKLYPY- 287
            +LKDLG +HYFL  ++ +                LK V+         P++  EKL  Y 
Sbjct: 1156 ALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYE 1215

Query: 288  GSPF--HDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP----WVLIGR 428
            GSP   +D   YRS+VGALQY+T+TRP+++YSVN+V Q++  P    W+ + R
Sbjct: 1216 GSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKR 1268


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 29/113 (25%)
 Frame = +3

Query: 177  SLKDLGVIHYFLEFKLRR----------------LKLVSFY------LPMTGGEKLYPY- 287
            +LKDLG +HYFL  ++ +                LK V+         P++  EKL  Y 
Sbjct: 1147 ALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYE 1206

Query: 288  GSPF--HDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP----WVLIGR 428
            GSP   +D   YRS+VGALQY+T+TRP+++YSVN+V Q++  P    W  + R
Sbjct: 1207 GSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTAVKR 1259


>emb|CAN80750.1| hypothetical protein VITISV_017861 [Vitis vinifera]
          Length = 762

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 23/101 (22%)
 Frame = +3

Query: 177 SLKDLGVIHYFLEFK---------LRRLKLVSFYL-------------PMTGGEKLYPYG 290
           +LK LG I YFL FK         L + K +S  L             PM   +KL    
Sbjct: 658 ALKTLGSISYFLGFKAFRDSSGLYLNQAKYISDLLVKTNMVHAKTSSTPMALDQKLALED 717

Query: 291 S-PFHDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP 410
           S PF D+ LYRS +GALQY+T+TRP++S+SVN++ Q+++ P
Sbjct: 718 SAPFPDVTLYRSTIGALQYLTLTRPDISFSVNKLSQFLKAP 758


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 25/103 (24%)
 Frame = +3

Query: 177  SLKDLGVIHYFLEFKLRR----------------LKLVSFY------LPMTGGEKLYPY- 287
            +LKDLG +HYFL  +++                 LK V+         P++  EKL  + 
Sbjct: 1141 ALKDLGRLHYFLGIEVKEVNNGIVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHE 1200

Query: 288  GSPF--HDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP 410
            G+PF   D   YRS+VGALQY+T+TRP+LS+SVN+V QY+  P
Sbjct: 1201 GNPFGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAP 1243


>emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]
          Length = 1379

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 22/100 (22%)
 Frame = +3

Query: 177 SLKDLGVIHYFLE---------FKLRRLKLVSFYL-------------PMTGGEKLYPYG 290
           ++KDLG + YFL          F L ++K  +  L             PM   ++L   G
Sbjct: 497 AVKDLGPLSYFLGLEVSYIPDGFFLSQVKYATDILARAQLLDSKPVPTPMIVSQRLSSEG 556

Query: 291 SPFHDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP 410
           +PF D  LYRS+VGALQY+TITRP L++S+N V Q++  P
Sbjct: 557 TPFADPTLYRSLVGALQYLTITRPNLAHSINSVSQFLHAP 596


>emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]
          Length = 950

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 25/103 (24%)
 Frame = +3

Query: 177 SLKDLGVIHYFLEFKLRR----------------LKLVSFY------LPMTGGEKLYPY- 287
           +LKDLG +HYFL  ++ +                LK V+         P++  EKL  Y 
Sbjct: 224 ALKDLGDLHYFLGIEVTKVSNGIILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYE 283

Query: 288 GSPF--HDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP 410
           GSP   +D   YRS+VGALQY+T+TRP+++YSVN+V Q++  P
Sbjct: 284 GSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAP 326


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 22/100 (22%)
 Frame = +3

Query: 177  SLKDLGVIHYFLEFK-------------------LRRLKLVS---FYLPMTGGEKLYPYG 290
            S+KDLG +HYFL  +                   L+R  ++       P   G+ L   G
Sbjct: 1059 SMKDLGDLHYFLGVEVQANEKGLFLSQTKYALDLLQRASMIDAKPISTPFVVGQHLSAEG 1118

Query: 291  SPFHDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP 410
            + F D  L+RS+ GALQY+TITRP+LS+SVN + Q+M  P
Sbjct: 1119 TLFSDPTLFRSLAGALQYLTITRPDLSFSVNSIFQFMHAP 1158


>emb|CAN65555.1| hypothetical protein VITISV_009833 [Vitis vinifera]
          Length = 325

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 22/100 (22%)
 Frame = +3

Query: 177 SLKDLGVIHYFLEFK-------------------LRRLKLVS---FYLPMTGGEKLYPYG 290
           S+KDLG +HYFL  +                   L+R  ++       P   G+ L   G
Sbjct: 23  SMKDLGBLHYFLGVEVQANEKGLFLSQTKYALDLLQRASMIDAKPISTPFVVGQHLSAEG 82

Query: 291 SPFHDLQLYRSVVGALQYMTITRPELSYSVNRVRQYMQQP 410
           + F D  L+RS+ GALQY+TITRP+LS+SVN + Q+M  P
Sbjct: 83  TLFSDPTLFRSLAGALQYLTITRPDLSFSVNSICQFMHAP 122


>ref|XP_006603141.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Glycine max]
          Length = 268

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 24/98 (24%)
 Frame = +3

Query: 180 LKDLGVIHYFLEFK----------LRRLKLVSFYL-------------PMTGGEKLYPYG 290
           LKDLG +H+FL  K          L + K ++  L             P+  G KL+  G
Sbjct: 73  LKDLGTLHFFLGIKANYTIIGALLLSQSKYITGLLAKVNMHNAKPIKTPLAPGSKLHMDG 132

Query: 291 -SPFHDLQLYRSVVGALQYMTITRPELSYSVNRVRQYM 401
              F D  LYRSVVGALQY TITRP +SY+VN++ Q+M
Sbjct: 133 IDAFSDPTLYRSVVGALQYATITRPNISYAVNKLCQFM 170