BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00028381
         (402 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004300762.1| PREDICTED: putative F-box protein At5g55150-...    55   8e-06

>ref|XP_004300762.1| PREDICTED: putative F-box protein At5g55150-like [Fragaria vesca
           subsp. vesca]
          Length = 368

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 8/124 (6%)
 Frame = -3

Query: 394 LQLINPL--SQMEIQLPSH--MNISSNTQQANEEIPTKLLFTKVILSSSTPLI*NLRGVM 227
           + L NPL  ++ +I+LP      + S+ Q   E       F K  + SS+P   +   +M
Sbjct: 117 VSLFNPLKINESQIELPDFDPSKMYSHIQPCPEH------FLKKFVLSSSPSRTSDYIIM 170

Query: 226 AVGIHYDLTKLGFLRLGDKAWTPIEI---DQGPN-SSSQLDDLIFYNQQLYIVNTLGTVF 59
            +G H  L   GF R GDK W  I+    D+  N     L+D+I+Y  Q Y+V  LGT+F
Sbjct: 171 VLGKHISL---GFCRPGDKQWRFIDTTGDDELINWDDKTLNDIIYYKGQFYVVGRLGTIF 227

Query: 58  VCDI 47
           VCDI
Sbjct: 228 VCDI 231