BLASTX nr result
ID: Cocculus22_contig00028371
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00028371
(285 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi... 73 3e-15
ref|XP_004308201.1| PREDICTED: uncharacterized protein LOC101305... 70 3e-14
gb|AFU25705.1| gag-pol precursor [Castanea mollissima] 73 5e-13
ref|WP_009187228.1| hypothetical protein [Cecembia lonarensis] g... 59 1e-12
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata] 66 6e-12
ref|XP_004308568.1| PREDICTED: uncharacterized protein LOC101290... 62 6e-12
emb|CAN72897.1| hypothetical protein VITISV_003776 [Vitis vinifera] 69 8e-12
ref|XP_004296026.1| PREDICTED: uncharacterized protein LOC101306... 59 1e-11
gb|AAK38382.1|AC079028_6 hypothetical protein [Arabidopsis thali... 60 1e-11
gb|AAG50898.1|AC068901_7 hypothetical protein [Arabidopsis thali... 60 1e-11
ref|XP_004298151.1| PREDICTED: uncharacterized protein LOC101300... 59 1e-11
ref|XP_004301757.1| PREDICTED: uncharacterized protein LOC101307... 61 2e-11
emb|CAN78921.1| hypothetical protein VITISV_011350 [Vitis vinifera] 69 2e-11
emb|CAN82830.1| hypothetical protein VITISV_005334 [Vitis vinifera] 70 2e-11
emb|CAN74304.1| hypothetical protein VITISV_013003 [Vitis vinifera] 68 3e-11
emb|CAN68501.1| hypothetical protein VITISV_026904 [Vitis vinifera] 70 3e-11
emb|CAN80066.1| hypothetical protein VITISV_035228 [Vitis vinifera] 73 4e-11
emb|CAN62495.1| hypothetical protein VITISV_027483 [Vitis vinifera] 70 4e-11
emb|CAN67441.1| hypothetical protein VITISV_020354 [Vitis vinifera] 69 4e-11
emb|CAN80433.1| hypothetical protein VITISV_014126 [Vitis vinifera] 69 5e-11
>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1787
Score = 72.8 bits (177), Expect(2) = 3e-15
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLR 125
RL KKGAWADEL VLWSYRTTPR ST ++PFSL + +EA+ E G+PT+R
Sbjct: 1617 RLDEKKGAWADELDGVLWSYRTTPRRSTDRTPFSLTYGMEALAPCEAGLPTVR 1669
Score = 34.3 bits (77), Expect(2) = 3e-15
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -1
Query: 102 LNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
LN ++LL NLD LE +R++A LR Y+Q +K+
Sbjct: 1679 LNDQMLLDNLDTLEEQRDQALLRIQNYQQAAAKF 1712
>ref|XP_004308201.1| PREDICTED: uncharacterized protein LOC101305990 [Fragaria vesca
subsp. vesca]
Length = 989
Score = 69.7 bits (169), Expect(2) = 3e-14
Identities = 30/55 (54%), Positives = 44/55 (80%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLRVT 119
RL+ KG WA +LP+VLW+ RTTP T+TG+SP+ L+F EA+IL+E+ +P+ R+T
Sbjct: 822 RLEDAKGLWAVKLPEVLWTIRTTPTTATGESPYLLSFGTEAVILVEMEVPSERIT 876
Score = 34.3 bits (77), Expect(2) = 3e-14
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = -1
Query: 114 FNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
++ + N+ L N+DLLE +R+ A LR + KQKI+++
Sbjct: 878 YDPKTNATGLRLNMDLLEERRDRAHLRNVNNKQKIARH 915
>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
Length = 1106
Score = 73.2 bits (178), Expect(2) = 5e-13
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = -3
Query: 268 KGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLR 125
KG W +ELP VLW+YRTTPR STG++PFS+ + +EA+I +ELG PTL+
Sbjct: 943 KGRWVEELPHVLWAYRTTPRRSTGETPFSMTYGMEAVIPLELGFPTLK 990
Score = 26.6 bits (57), Expect(2) = 5e-13
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -1
Query: 138 FPP*G*HDFNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISK 4
FP +N N +L +L+ +E +RE A ++ +Y+QK+ +
Sbjct: 986 FPTLKFDQYNNVTNHDMLHDSLNTIEERREVASVKMGSYQQKLKQ 1030
>ref|WP_009187228.1| hypothetical protein [Cecembia lonarensis]
gi|405551179|gb|EKB47186.1| hypothetical protein
B879_04221 [Cecembia lonarensis LW9]
Length = 145
Score = 58.9 bits (141), Expect(2) = 1e-12
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = -3
Query: 268 KGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLRV 122
KG W + +PQ+LW YR + RTSTG++PF LAF EA++ +EL T RV
Sbjct: 43 KGCWPEFVPQILWLYRNSYRTSTGETPFLLAFGTEAVVPVELEQATFRV 91
Score = 39.3 bits (90), Expect(2) = 1e-12
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = -1
Query: 117 DFNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
++ Q N K L NLDL+E +A LR +AYKQ+IS Y
Sbjct: 93 NYVQSENDKQLTLNLDLVEEHINQAHLRNVAYKQRISNY 131
>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
Length = 1103
Score = 65.9 bits (159), Expect(2) = 6e-12
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLRVT 119
RL KG W +EL VLW+YRTTPR TG++PFSL + +EA++ EL +P LR T
Sbjct: 933 RLNHLKGGWYEELQPVLWAYRTTPRRPTGETPFSLVYGMEAVVPAELNVPGLRRT 987
Score = 30.0 bits (66), Expect(2) = 6e-12
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -1
Query: 111 NQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
N+E NS +L +LD + +R++A +R Y+Q ++Y
Sbjct: 992 NEEENSAMLNDSLDTINERRDQALIRIQNYQQAAARY 1028
>ref|XP_004308568.1| PREDICTED: uncharacterized protein LOC101290910 [Fragaria vesca
subsp. vesca]
Length = 498
Score = 62.0 bits (149), Expect(2) = 6e-12
Identities = 26/55 (47%), Positives = 41/55 (74%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLRVT 119
RL+ KG W +LP+VLW+ RTTP +TG+SP+ L++ EA+I +E+ +P+ R+T
Sbjct: 346 RLEDAKGLWVAKLPEVLWTIRTTPIAATGESPYLLSYGTEAVIPVEMEVPSERIT 400
Score = 33.9 bits (76), Expect(2) = 6e-12
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -1
Query: 114 FNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
++ E N+ L N+DLL+ +R+ A R I KQKI+K+
Sbjct: 402 YDPETNATGLRLNMDLLDERRDRAHQRNINNKQKIAKH 439
>emb|CAN72897.1| hypothetical protein VITISV_003776 [Vitis vinifera]
Length = 959
Score = 68.6 bits (166), Expect(2) = 8e-12
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLR 125
RL+ KG W +ELP VLW+YRTTP TG +PF+LA+ ++A+I E+G+PT+R
Sbjct: 791 RLEQAKGKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMDAVIPTEIGLPTIR 843
Score = 26.9 bits (58), Expect(2) = 8e-12
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 117 DFNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
D N EL NLD + RE A +R + YKQ+ S +
Sbjct: 851 DANMELGR-----NLDWTDEVRENAAIRMVDYKQRASAH 884
>ref|XP_004296026.1| PREDICTED: uncharacterized protein LOC101306711 [Fragaria vesca
subsp. vesca]
Length = 520
Score = 59.3 bits (142), Expect(2) = 1e-11
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLRVT 119
RL+ KG WA +L +VLW+ RTTP +TG+SP+ L++ EA+I +E+ +P+ RVT
Sbjct: 357 RLEDVKGLWAAKLLKVLWTLRTTPIAATGESPYLLSYGTEAVIPVEMEVPSERVT 411
Score = 35.8 bits (81), Expect(2) = 1e-11
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = -1
Query: 114 FNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
++ E N+ L N+DLLE +++ A LR I KQKI+K+
Sbjct: 413 YDPETNTTGLRLNMDLLEERQDRAHLRYINKKQKIAKH 450
>gb|AAK38382.1|AC079028_6 hypothetical protein [Arabidopsis thaliana]
Length = 257
Score = 60.1 bits (144), Expect(2) = 1e-11
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = -3
Query: 271 KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLRVT 119
KK W+D L VLW+YRTTPR ST ++PFSLA+ +EA+I I IP++R T
Sbjct: 131 KKSMWSDVLHGVLWAYRTTPRKSTQETPFSLAYGLEAVIPIVTIIPSVRRT 181
Score = 35.0 bits (79), Expect(2) = 1e-11
Identities = 11/37 (29%), Positives = 27/37 (72%)
Frame = -1
Query: 111 NQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
N ++N+++L N+D ++ +R++A +R Y+Q +++Y
Sbjct: 186 NSDMNTQMLRDNMDFIDERRDQAMIRVQNYQQAVTRY 222
>gb|AAG50898.1|AC068901_7 hypothetical protein [Arabidopsis thaliana]
Length = 243
Score = 60.1 bits (144), Expect(2) = 1e-11
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = -3
Query: 271 KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLRVT 119
KK W+D L VLW+YRTTPR ST ++PFSLA+ +EA+I I IP++R T
Sbjct: 117 KKSMWSDVLHGVLWAYRTTPRKSTQETPFSLAYGLEAVIPIVTIIPSVRRT 167
Score = 35.0 bits (79), Expect(2) = 1e-11
Identities = 11/37 (29%), Positives = 27/37 (72%)
Frame = -1
Query: 111 NQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
N ++N+++L N+D ++ +R++A +R Y+Q +++Y
Sbjct: 172 NSDMNTQMLRDNMDFIDERRDQAMIRVQNYQQAVTRY 208
>ref|XP_004298151.1| PREDICTED: uncharacterized protein LOC101300244 [Fragaria vesca
subsp. vesca]
Length = 629
Score = 59.3 bits (142), Expect(2) = 1e-11
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = -3
Query: 268 KGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLRVT*FQS 107
KG WA +LP+VLW+ +TT +TG++PFS+AF E ++ IE IP+ RV F +
Sbjct: 471 KGLWAQKLPEVLWAIKTTTTEATGETPFSMAFGTEVVLPIETSIPSGRVKNFNA 524
Score = 35.4 bits (80), Expect(2) = 1e-11
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -1
Query: 117 DFNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
+FN N + L N+DL+E KR+ A L YKQ+++++
Sbjct: 521 NFNATTNEEGLHLNIDLIEEKRKRADLHNQVYKQRVARH 559
>ref|XP_004301757.1| PREDICTED: uncharacterized protein LOC101307997 [Fragaria vesca
subsp. vesca]
Length = 832
Score = 60.8 bits (146), Expect(2) = 2e-11
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLRV 122
RL+ KG WA +LP+VLW+ RTTP T+TG+S + L++ EA+I +E+ +P+ R+
Sbjct: 669 RLEEAKGLWAAKLPKVLWTLRTTPTTATGESSYLLSYGTEAVIPVEMEVPSERI 722
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -1
Query: 114 FNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
++ N+ L N+DLLE + + A LR + YKQK++++
Sbjct: 725 YDPAANTAGLRLNMDLLEERWDRAHLRNVNYKQKVARH 762
>emb|CAN78921.1| hypothetical protein VITISV_011350 [Vitis vinifera]
Length = 1000
Score = 68.6 bits (166), Expect(2) = 2e-11
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLR 125
RL+ KG W +ELP VLW+YRTTP TG +PF+LA+ ++A+I E+G+PT+R
Sbjct: 832 RLEQAKGKWVEELPGVLWTYRTTPGQPTGNTPFALAYGMDAVIPTEIGLPTIR 884
Score = 25.4 bits (54), Expect(2) = 2e-11
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 117 DFNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
D N EL NLD + RE A +R + Y+Q+ S +
Sbjct: 892 DTNMELGR-----NLDWTDEVRESAAIRMVDYQQRASAH 925
>emb|CAN82830.1| hypothetical protein VITISV_005334 [Vitis vinifera]
Length = 873
Score = 70.1 bits (170), Expect(2) = 2e-11
Identities = 31/53 (58%), Positives = 41/53 (77%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLR 125
RL+ KG W +ELP VLW+YRTTP TG +PF+LA+ + AII IE+G+PT+R
Sbjct: 705 RLEQAKGKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMNAIIPIEIGLPTIR 757
Score = 23.9 bits (50), Expect(2) = 2e-11
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 117 DFNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
D N EL NLD + RE A +R Y+Q+ S +
Sbjct: 765 DANAELGR-----NLDWADEVRESASIRMADYQQRASAH 798
>emb|CAN74304.1| hypothetical protein VITISV_013003 [Vitis vinifera]
Length = 894
Score = 67.8 bits (164), Expect(2) = 3e-11
Identities = 29/53 (54%), Positives = 40/53 (75%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLR 125
RL+ KG W +ELP VLW+YRTTP TG +PF+LA+ + A+I E+G+PT+R
Sbjct: 796 RLEQAKGKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMNAVIPTEIGLPTIR 848
Score = 25.8 bits (55), Expect(2) = 3e-11
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 108 QELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
Q+ S VL NLD + RE A +R Y+Q+ S +
Sbjct: 854 QDDASTVLGRNLDWADEVRESAAIRMTDYQQRASAH 889
>emb|CAN68501.1| hypothetical protein VITISV_026904 [Vitis vinifera]
Length = 817
Score = 70.5 bits (171), Expect(2) = 3e-11
Identities = 30/54 (55%), Positives = 43/54 (79%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLRV 122
RL+ KG W +ELP VLW+YRTTP T +PF+LA++++AII IE+G+PT+R+
Sbjct: 660 RLEQAKGKWVEELPGVLWTYRTTPGRPTRNTPFALAYDMDAIIPIEIGLPTIRI 713
Score = 23.1 bits (48), Expect(2) = 3e-11
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 120 HDFNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
+D N EL NLD + RE A +R Y+Q+ + +
Sbjct: 719 NDANAELGR-----NLDWADEXRETASIRMABYQQRAAAH 753
>emb|CAN80066.1| hypothetical protein VITISV_035228 [Vitis vinifera]
Length = 961
Score = 73.2 bits (178), Expect = 4e-11
Identities = 30/53 (56%), Positives = 44/53 (83%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLR 125
RL+ KG W +ELP+VLW+YRTTP TG +PF+LA+ ++A+ILIE+G+PT++
Sbjct: 810 RLEQAKGKWVEELPEVLWAYRTTPGRPTGNTPFALAYGMDAVILIEIGLPTIQ 862
>emb|CAN62495.1| hypothetical protein VITISV_027483 [Vitis vinifera]
Length = 927
Score = 69.7 bits (169), Expect(2) = 4e-11
Identities = 28/54 (51%), Positives = 41/54 (75%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLRV 122
R + KG W +ELP VLW+YRTTPR TG +PF+LA+ ++ +I E+G+PT+R+
Sbjct: 759 RFEQAKGKWVEELPDVLWAYRTTPRRPTGNTPFALAYGMDIVIPTEIGLPTIRI 812
Score = 23.5 bits (49), Expect(2) = 4e-11
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 117 DFNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
D N EL NLD + RE A +R Y+Q+ S +
Sbjct: 819 DANAELGR-----NLDWADEVRETASIRMADYQQRASAH 852
>emb|CAN67441.1| hypothetical protein VITISV_020354 [Vitis vinifera]
Length = 889
Score = 68.6 bits (166), Expect(2) = 4e-11
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLR 125
RL+ KG W +ELP VLW+YRTTP TG +PF+LA+ ++A+I E+G+PT+R
Sbjct: 738 RLEQAKGKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMDAVIPTEIGLPTIR 790
Score = 24.6 bits (52), Expect(2) = 4e-11
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 78 NLDLLESKREEAQLRAIAYKQKISKY 1
NLD + RE A +R Y+Q++S +
Sbjct: 806 NLDWADEVRESAAIRMADYQQRVSAH 831
>emb|CAN80433.1| hypothetical protein VITISV_014126 [Vitis vinifera]
Length = 985
Score = 68.6 bits (166), Expect(2) = 5e-11
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = -3
Query: 283 RLK*KKGAWADELPQVLWSYRTTPRTSTGKSPFSLAFEVEAIILIELGIPTLR 125
RL+ KG W +ELP VLW+YRTTP TG +PF+LA+ ++A+I E+G+PT+R
Sbjct: 817 RLEQAKGKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMDAVIPTEIGLPTIR 869
Score = 24.3 bits (51), Expect(2) = 5e-11
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 120 HDFNQELNSKVLLANLDLLESKREEAQLRAIAYKQKISKY 1
+D N EL NLD + RE A +R Y+Q+ S +
Sbjct: 876 NDANTELGK-----NLDWADEVRERAAIRMANYQQRASAH 910