BLASTX nr result
ID: Cocculus22_contig00028264
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00028264
(1185 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotei... 99 3e-18
ref|XP_006428572.1| hypothetical protein CICLE_v100108901mg, par... 99 3e-18
emb|CBI36671.3| unnamed protein product [Vitis vinifera] 99 3e-18
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 99 5e-18
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 99 5e-18
ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotei... 98 8e-18
gb|EYU41212.1| hypothetical protein MIMGU_mgv1a000056mg [Mimulus... 97 1e-17
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 96 4e-17
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei... 96 4e-17
gb|EYU30521.1| hypothetical protein MIMGU_mgv1a000041mg [Mimulus... 95 5e-17
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei... 94 9e-17
ref|XP_006421928.1| hypothetical protein CICLE_v10004124mg [Citr... 94 9e-17
ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotei... 94 9e-17
ref|XP_007208410.1| hypothetical protein PRUPE_ppa000042mg [Prun... 94 1e-16
gb|EPS64394.1| hypothetical protein M569_10384, partial [Genlise... 94 1e-16
ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [A... 93 2e-16
ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase,... 93 2e-16
ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase,... 93 2e-16
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei... 92 3e-16
gb|EPS58129.1| hypothetical protein M569_16686, partial [Genlise... 92 4e-16
>ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Citrus sinensis]
gi|568853532|ref|XP_006480406.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Citrus sinensis]
Length = 2179
Score = 99.4 bits (246), Expect = 3e-18
Identities = 51/94 (54%), Positives = 72/94 (76%)
Frame = +2
Query: 125 GFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDKKAEI 304
G YQP +++TR AYEA+LSV++QQ+GG P +V G ADE+L+VLK +D ++NP DKK EI
Sbjct: 115 GTYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLK-NDAVKNP-DKKKEI 172
Query: 305 ERLMMNPIADHLFEEMVQIGECITDYSIQEDKIG 406
E+L +NPI +H+F+++V IG+ ITDY D G
Sbjct: 173 EKL-LNPIPNHVFDQLVSIGKLITDYQDAGDAAG 205
>ref|XP_006428572.1| hypothetical protein CICLE_v100108901mg, partial [Citrus
clementina] gi|557530629|gb|ESR41812.1| hypothetical
protein CICLE_v100108901mg, partial [Citrus clementina]
Length = 1791
Score = 99.4 bits (246), Expect = 3e-18
Identities = 51/94 (54%), Positives = 72/94 (76%)
Frame = +2
Query: 125 GFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDKKAEI 304
G YQP +++TR AYEA+LSV++QQ+GG P +V G ADE+L+VLK +D ++NP DKK EI
Sbjct: 115 GTYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLK-NDAVKNP-DKKKEI 172
Query: 305 ERLMMNPIADHLFEEMVQIGECITDYSIQEDKIG 406
E+L +NPI +H+F+++V IG+ ITDY D G
Sbjct: 173 EKL-LNPIPNHVFDQLVSIGKLITDYQDAGDAAG 205
>emb|CBI36671.3| unnamed protein product [Vitis vinifera]
Length = 1405
Score = 99.4 bits (246), Expect = 3e-18
Identities = 60/154 (38%), Positives = 93/154 (60%), Gaps = 1/154 (0%)
Frame = +2
Query: 110 NNNNTGFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPID 289
++ G YQP +++TR AYEA+LSV++QQ+GG P +V G ADE+L+VLK ++ ++NP D
Sbjct: 106 SSTEEGVYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLK-NETVKNP-D 163
Query: 290 KKAEIERLMMNPIADHLFEEMVQIGECITDYSIQEDKIGFYQPTTEKTRVAYMFLLSVVE 469
KK EIERL +NPI +H+F+++V IG ITD+ + ++ T + +L +
Sbjct: 164 KKKEIERL-LNPIPNHIFDQLVSIGRLITDFQDEANE----GMTLNVQDIDAYWLQRKIS 218
Query: 470 DRLRDQPQIVHCM-VAHEVLLILNNGSIKHQKTQ 568
Q C +A EVL IL G + +T+
Sbjct: 219 QAYEQQIDPQQCQKLAEEVLKILAEGDDREVETK 252
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
[Vitis vinifera]
Length = 2177
Score = 98.6 bits (244), Expect = 5e-18
Identities = 50/99 (50%), Positives = 73/99 (73%)
Frame = +2
Query: 110 NNNNTGFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPID 289
++ G YQP +++TR AYEA+LSV++QQ+GG P +V G ADE+L+VLK ++ ++NP D
Sbjct: 106 SSTEEGVYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLK-NETVKNP-D 163
Query: 290 KKAEIERLMMNPIADHLFEEMVQIGECITDYSIQEDKIG 406
KK EIERL +NPI +H+F+++V IG ITD+ D G
Sbjct: 164 KKKEIERL-LNPIPNHIFDQLVSIGRLITDFQDGGDAAG 201
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 98.6 bits (244), Expect = 5e-18
Identities = 50/99 (50%), Positives = 73/99 (73%)
Frame = +2
Query: 110 NNNNTGFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPID 289
++ G YQP +++TR AYEA+LSV++QQ+GG P +V G ADE+L+VLK ++ ++NP D
Sbjct: 106 SSTEEGVYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLK-NETVKNP-D 163
Query: 290 KKAEIERLMMNPIADHLFEEMVQIGECITDYSIQEDKIG 406
KK EIERL +NPI +H+F+++V IG ITD+ D G
Sbjct: 164 KKKEIERL-LNPIPNHIFDQLVSIGRLITDFQDGGDAAG 201
>ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Cicer arietinum]
gi|502089221|ref|XP_004488846.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Cicer arietinum]
Length = 2187
Score = 97.8 bits (242), Expect = 8e-18
Identities = 48/93 (51%), Positives = 72/93 (77%)
Frame = +2
Query: 125 GFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDKKAEI 304
G YQP +++TR AYEA+LSV++QQ+GG P +V G ADE+L+VLK +D ++NP DKK +I
Sbjct: 111 GVYQPKTKETRAAYEAMLSVIQQQLGGQPLSIVSGAADEILAVLK-NDTVKNP-DKKKDI 168
Query: 305 ERLMMNPIADHLFEEMVQIGECITDYSIQEDKI 403
E+L +NPI +H+F+++V IG+ ITD+ D +
Sbjct: 169 EKL-LNPIPNHVFDQLVSIGKLITDFQEVSDAV 200
>gb|EYU41212.1| hypothetical protein MIMGU_mgv1a000056mg [Mimulus guttatus]
Length = 2013
Score = 97.4 bits (241), Expect = 1e-17
Identities = 50/95 (52%), Positives = 72/95 (75%)
Frame = +2
Query: 113 NNNTGFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDK 292
++ G YQP +++TR AYEA+LSV++QQ+GG P +V G ADE+L+VLK +DN++NP DK
Sbjct: 104 SSEEGVYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLK-NDNLKNP-DK 161
Query: 293 KAEIERLMMNPIADHLFEEMVQIGECITDYSIQED 397
K EIE+L +NPI+ F+E+V+IG +TDY D
Sbjct: 162 KKEIEKL-LNPISVSTFDELVKIGRLVTDYHDASD 195
>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Cucumis sativus]
Length = 2175
Score = 95.5 bits (236), Expect = 4e-17
Identities = 49/94 (52%), Positives = 70/94 (74%)
Frame = +2
Query: 125 GFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDKKAEI 304
G Y P +++TR AYEA+LSV++QQ+GG P +V G ADE+L+VLK +D+ +NP DKK EI
Sbjct: 110 GVYMPKTKETRAAYEAMLSVIQQQLGGQPLSIVSGAADEILAVLK-NDSFKNP-DKKKEI 167
Query: 305 ERLMMNPIADHLFEEMVQIGECITDYSIQEDKIG 406
E+L +NPI +++F+++V IG ITDY D G
Sbjct: 168 EKL-LNPIPNNVFDQLVSIGRLITDYQDGNDATG 200
>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Cucumis sativus]
Length = 2175
Score = 95.5 bits (236), Expect = 4e-17
Identities = 49/94 (52%), Positives = 70/94 (74%)
Frame = +2
Query: 125 GFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDKKAEI 304
G Y P +++TR AYEA+LSV++QQ+GG P +V G ADE+L+VLK +D+ +NP DKK EI
Sbjct: 110 GVYMPKTKETRAAYEAMLSVIQQQLGGQPLSIVSGAADEILAVLK-NDSFKNP-DKKKEI 167
Query: 305 ERLMMNPIADHLFEEMVQIGECITDYSIQEDKIG 406
E+L +NPI +++F+++V IG ITDY D G
Sbjct: 168 EKL-LNPIPNNVFDQLVSIGRLITDYQDGNDATG 200
>gb|EYU30521.1| hypothetical protein MIMGU_mgv1a000041mg [Mimulus guttatus]
Length = 2168
Score = 95.1 bits (235), Expect = 5e-17
Identities = 48/90 (53%), Positives = 70/90 (77%)
Frame = +2
Query: 113 NNNTGFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDK 292
++ G YQP +++TR AYEA+LS ++QQ+GG P +V G ADE+L+VLK +DN++NP DK
Sbjct: 104 SSEEGVYQPKTKETRAAYEAMLSAIQQQLGGQPLNIVSGAADEILAVLK-NDNLKNP-DK 161
Query: 293 KAEIERLMMNPIADHLFEEMVQIGECITDY 382
KAEIE+L +NPI+ F+E+V+ G +TDY
Sbjct: 162 KAEIEKL-LNPISVATFDELVKTGRLVTDY 190
>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum tuberosum]
Length = 2174
Score = 94.4 bits (233), Expect = 9e-17
Identities = 47/90 (52%), Positives = 71/90 (78%)
Frame = +2
Query: 113 NNNTGFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDK 292
++ G YQP +++TR AYEA+LS+++QQ+GG P +V G ADE+L+VLK +DN +NP +K
Sbjct: 104 SSEEGVYQPKTKETRAAYEAMLSLIQQQLGGQPLNIVSGAADEMLAVLK-NDNFKNP-EK 161
Query: 293 KAEIERLMMNPIADHLFEEMVQIGECITDY 382
K EIE+L +NPI++ +F+++V IG ITDY
Sbjct: 162 KKEIEKL-LNPISNQVFDQLVSIGRLITDY 190
>ref|XP_006421928.1| hypothetical protein CICLE_v10004124mg [Citrus clementina]
gi|557523801|gb|ESR35168.1| hypothetical protein
CICLE_v10004124mg [Citrus clementina]
Length = 2086
Score = 94.4 bits (233), Expect = 9e-17
Identities = 52/114 (45%), Positives = 76/114 (66%)
Frame = +2
Query: 44 SSRNSFALHYPN*CYPSMEENPNNNNTGFYQPSSEDTREAYEALLSVVEQQVGGFPSIVV 223
S R LH + + EE G Y+P + +TR AY A+LSV++QQ+GG P +V
Sbjct: 78 SKRRRLRLHEESVLLAASEE-------GTYKPKTNETRAAYRAMLSVIQQQLGGQPLSIV 130
Query: 224 RGVADEVLSVLKCDDNIENPIDKKAEIERLMMNPIADHLFEEMVQIGECITDYS 385
ADE+L+VLK DD++E P DKK +IE+L +NPI +H+F+++V IG+ ITDY+
Sbjct: 131 SAAADEILAVLK-DDSVEKP-DKKKDIEKL-LNPIPNHVFDQLVSIGKLITDYN 181
>ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum lycopersicum]
Length = 2174
Score = 94.4 bits (233), Expect = 9e-17
Identities = 47/90 (52%), Positives = 71/90 (78%)
Frame = +2
Query: 113 NNNTGFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDK 292
++ G YQP +++TR AYEA+LS+++QQ+GG P +V G ADE+L+VLK +DN +NP +K
Sbjct: 104 SSEEGVYQPKTKETRAAYEAMLSLIQQQLGGQPLNIVSGAADEMLAVLK-NDNFKNP-EK 161
Query: 293 KAEIERLMMNPIADHLFEEMVQIGECITDY 382
K EIE+L +NPI++ +F+++V IG ITDY
Sbjct: 162 KKEIEKL-LNPISNQVFDQLVSIGRLITDY 190
>ref|XP_007208410.1| hypothetical protein PRUPE_ppa000042mg [Prunus persica]
gi|462404052|gb|EMJ09609.1| hypothetical protein
PRUPE_ppa000042mg [Prunus persica]
Length = 2180
Score = 94.0 bits (232), Expect = 1e-16
Identities = 47/86 (54%), Positives = 68/86 (79%)
Frame = +2
Query: 125 GFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDKKAEI 304
G YQP +++TR AYEA+LSV++QQ+GG PS +V G ADE+L+VLK ++ +NP DKK EI
Sbjct: 110 GVYQPKTKETRAAYEAMLSVIQQQLGGQPSSIVSGAADEILAVLK-NETFKNP-DKKKEI 167
Query: 305 ERLMMNPIADHLFEEMVQIGECITDY 382
E+ M+NPI + +F+++V IG ITD+
Sbjct: 168 EK-MLNPIPNSVFDQLVSIGRLITDF 192
>gb|EPS64394.1| hypothetical protein M569_10384, partial [Genlisea aurea]
Length = 977
Score = 93.6 bits (231), Expect = 1e-16
Identities = 47/90 (52%), Positives = 70/90 (77%)
Frame = +2
Query: 113 NNNTGFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDK 292
+++ G YQP +++T AYEA+LSV++QQ+GG P +V G ADE+L+VLK ++N++NP DK
Sbjct: 121 SSDEGVYQPKTKETAAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLK-NENLKNP-DK 178
Query: 293 KAEIERLMMNPIADHLFEEMVQIGECITDY 382
K EIE+L +NPI +F+++V IG ITDY
Sbjct: 179 KKEIEKL-LNPIPGSMFDQLVSIGRLITDY 207
>ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [Amborella trichopoda]
gi|548853523|gb|ERN11506.1| hypothetical protein
AMTR_s00022p00114710 [Amborella trichopoda]
Length = 2171
Score = 93.2 bits (230), Expect = 2e-16
Identities = 49/86 (56%), Positives = 65/86 (75%)
Frame = +2
Query: 125 GFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDKKAEI 304
G YQP ++DTR AYE LLS+++QQ GG P ++RG ADEVLSVLK ++ I++P DKK EI
Sbjct: 110 GVYQPKTKDTRAAYEILLSLIQQQFGGQPQDILRGAADEVLSVLK-NEKIKDP-DKKKEI 167
Query: 305 ERLMMNPIADHLFEEMVQIGECITDY 382
E+L +NPI LF +V +G+ ITDY
Sbjct: 168 EKL-LNPITPQLFTNLVSVGKLITDY 192
>ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao] gi|508727828|gb|EOY19725.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao]
Length = 2062
Score = 93.2 bits (230), Expect = 2e-16
Identities = 47/86 (54%), Positives = 68/86 (79%)
Frame = +2
Query: 125 GFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDKKAEI 304
G YQP +++TR AYEA+LS+++QQ+GG P +V G ADE+L+VLK ++ I+NP DKK EI
Sbjct: 109 GVYQPKTKETRAAYEAMLSLIQQQLGGQPLNIVSGAADEILAVLK-NEGIKNP-DKKKEI 166
Query: 305 ERLMMNPIADHLFEEMVQIGECITDY 382
E+L +NPI +F+++V IG+ ITDY
Sbjct: 167 EKL-LNPIPSQVFDQLVSIGKLITDY 191
>ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao] gi|508727827|gb|EOY19724.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao]
Length = 2176
Score = 93.2 bits (230), Expect = 2e-16
Identities = 47/86 (54%), Positives = 68/86 (79%)
Frame = +2
Query: 125 GFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDKKAEI 304
G YQP +++TR AYEA+LS+++QQ+GG P +V G ADE+L+VLK ++ I+NP DKK EI
Sbjct: 109 GVYQPKTKETRAAYEAMLSLIQQQLGGQPLNIVSGAADEILAVLK-NEGIKNP-DKKKEI 166
Query: 305 ERLMMNPIADHLFEEMVQIGECITDY 382
E+L +NPI +F+++V IG+ ITDY
Sbjct: 167 EKL-LNPIPSQVFDQLVSIGKLITDY 191
>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Glycine max]
Length = 2183
Score = 92.4 bits (228), Expect = 3e-16
Identities = 45/91 (49%), Positives = 70/91 (76%)
Frame = +2
Query: 110 NNNNTGFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPID 289
+ ++ G YQP +++TR AYEA+LSV++ Q+GG P +V ADE+L+VLK +D ++NP D
Sbjct: 107 STSDDGVYQPKTKETRAAYEAMLSVIQNQLGGQPLSIVSAAADEILAVLK-NDTVKNP-D 164
Query: 290 KKAEIERLMMNPIADHLFEEMVQIGECITDY 382
KK +IE+L +NPI H+F+++V IG+ ITD+
Sbjct: 165 KKKDIEKL-LNPIPGHVFDQLVSIGKLITDF 194
>gb|EPS58129.1| hypothetical protein M569_16686, partial [Genlisea aurea]
Length = 301
Score = 92.0 bits (227), Expect = 4e-16
Identities = 46/90 (51%), Positives = 70/90 (77%)
Frame = +2
Query: 113 NNNTGFYQPSSEDTREAYEALLSVVEQQVGGFPSIVVRGVADEVLSVLKCDDNIENPIDK 292
+++ G YQP +++T AYEA+LSV++QQ+GG P +V G ADE+L+VLK ++N++NP +K
Sbjct: 50 SSDEGVYQPKTKETAAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLK-NENLKNP-EK 107
Query: 293 KAEIERLMMNPIADHLFEEMVQIGECITDY 382
K EIE+L +NPI +F+++V IG ITDY
Sbjct: 108 KKEIEKL-LNPIPGSMFDQLVSIGRLITDY 136