BLASTX nr result
ID: Cocculus22_contig00028170
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus22_contig00028170 (596 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_007207635.1| hypothetical protein PRUPE_ppa021864mg [Prun... 265 7e-69 emb|CBI26593.3| unnamed protein product [Vitis vinifera] 265 7e-69 ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containi... 265 7e-69 emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera] 263 3e-68 ref|XP_004978055.1| PREDICTED: pentatricopeptide repeat-containi... 263 4e-68 gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japo... 262 5e-68 ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group] g... 262 5e-68 emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group] 262 5e-68 ref|XP_002307076.2| pentatricopeptide repeat-containing family p... 261 1e-67 ref|XP_006653490.1| PREDICTED: pentatricopeptide repeat-containi... 256 4e-66 ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [S... 255 8e-66 gb|EXB29469.1| hypothetical protein L484_022141 [Morus notabilis] 254 1e-65 ref|XP_007047919.1| Pentatricopeptide repeat (PPR) superfamily p... 254 2e-65 ref|XP_006578120.1| PREDICTED: pentatricopeptide repeat-containi... 253 2e-65 gb|EMT33720.1| hypothetical protein F775_11239 [Aegilops tauschii] 253 4e-65 gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays] 252 5e-65 ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containi... 251 8e-65 ref|XP_003617675.1| Pentatricopeptide repeat-containing protein ... 247 2e-63 ref|XP_007136958.1| hypothetical protein PHAVU_009G088300g [Phas... 244 1e-62 ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containi... 241 9e-62 >ref|XP_007207635.1| hypothetical protein PRUPE_ppa021864mg [Prunus persica] gi|462403277|gb|EMJ08834.1| hypothetical protein PRUPE_ppa021864mg [Prunus persica] Length = 748 Score = 265 bits (677), Expect = 7e-69 Identities = 126/198 (63%), Positives = 163/198 (82%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 +TVL+ACSHL L G+++H++IKE L +LS+ATALV+MY KCGQL +RE+FDS+ E Sbjct: 510 VTVLSACSHLASLGEGEKIHSHIKERRLEINLSLATALVDMYAKCGQLEKSRELFDSMEE 569 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DVI WNVMISGY THG A ALE+F +MENS +KP +++FLA+LSAC H+GLV EGKYL Sbjct: 570 RDVISWNVMISGYATHGHAEPALEIFRKMENSNIKPNELTFLALLSACNHSGLVEEGKYL 629 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F +M++ S+ P LKHYACMVD+LGR+GNLQEA+ +VLSM + PDGGVWG+LL AC+IHN Sbjct: 630 FGKMQD-LSLKPNLKHYACMVDILGRSGNLQEAKDLVLSMPIPPDGGVWGSLLSACKIHN 688 Query: 542 DFQMGEQVAWQAIESDPE 595 + ++G +VA AIESDPE Sbjct: 689 EIELGVRVARHAIESDPE 706 Score = 97.8 bits (242), Expect = 2e-18 Identities = 55/171 (32%), Positives = 93/171 (54%) Frame = +2 Query: 26 HLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWNV 205 HLG + G+ +H Y+ ++ + ++SVA +L++MY K G L IAR IF S T++D+I WN Sbjct: 418 HLGAIHLGRSLHCYLIKVSMDENISVANSLLDMYGKSGHLKIARRIF-SGTQRDIITWNT 476 Query: 206 MISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDRMRNYY 385 MIS Y G +A A+ +F +M KP + + VLSAC+H + EG+ + ++ Sbjct: 477 MISSYTHAGHSAEAIALFEKMIAVNFKPNSATLVTVLSACSHLASLGEGEKIHSHIKE-R 535 Query: 386 SIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIH 538 + L +VD+ + G L+++ + SM + D W ++ H Sbjct: 536 RLEINLSLATALVDMYAKCGQLEKSRELFDSME-ERDVISWNVMISGYATH 585 Score = 72.0 bits (175), Expect = 1e-10 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 5/152 (3%) Frame = +2 Query: 11 LAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDV 190 L AC LG L GK +H ++ + G+ C +V + L++MY +CG G + F + +KD+ Sbjct: 242 LQACGDLGTLVEGKCLHGFVVKSGIGCSEAVKSLLLSMYSRCGVPGESYLSFCEIKDKDL 301 Query: 191 ILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK-YLFD 367 + W +I Y G L +F M+ S + P ++ +LS ++ + EGK +L Sbjct: 302 LSWTSVIGVYARSGLMDECLSLFQGMQVSDIFPDEIVVNCMLSGFKNSTTINEGKAFLGS 361 Query: 368 RMRNYYSIA----PTLKHYACMVDLLGRAGNL 451 +R Y+++ L C +LL RA L Sbjct: 362 VIRKNYALSQMVHSALLSMYCKFELLTRAEKL 393 Score = 71.6 bits (174), Expect = 2e-10 Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 4/122 (3%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLS-VATALVNMYVKCGQLGIAREIFDSVTEK 184 V+A+C+ L +L+HG VH ++GL S V ++ V MY KCG++ A +F+ T + Sbjct: 136 VVASCAELMLLEHGNNVHGLALKLGLFSGNSAVGSSFVYMYSKCGRMEDAYFMFEETTVR 195 Query: 185 DVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAV---LSACAHTGLVAEGK 355 DV+ W +I GY + + LE +M G +F + L AC G + EGK Sbjct: 196 DVVCWTALIIGYVQNDEIEKGLECLCEMHRVGGSDERPNFRTLEVGLQACGDLGTLVEGK 255 Query: 356 YL 361 L Sbjct: 256 CL 257 Score = 63.2 bits (152), Expect = 5e-08 Identities = 42/161 (26%), Positives = 73/161 (45%) Frame = +2 Query: 38 LDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWNVMISG 217 L + + HA I G ++ +A L++ Y + + ++F SV KD LWN +I Sbjct: 45 LQYLSQSHALIVTSGNANNIFIAAKLISFYASLSKPTFSTKVFGSVCPKDTFLWNSIIKT 104 Query: 218 YGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDRMRNYYSIAP 397 + ++GD + AL+ F QM G PT + V+++CA L+ G + + Sbjct: 105 HFSNGDYSKALDFFFQMRALGFAPTQFTLPMVVASCAELMLLEHGNNVHGLALKLGLFSG 164 Query: 398 TLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALL 520 + V + + G +++A M TV D W AL+ Sbjct: 165 NSAVGSSFVYMYSKCGRMEDAYFMFEETTV-RDVVCWTALI 204 >emb|CBI26593.3| unnamed protein product [Vitis vinifera] Length = 459 Score = 265 bits (677), Expect = 7e-69 Identities = 128/198 (64%), Positives = 160/198 (80%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++VL+ACSHL L+ G++VH YI +LS+ATAL++MY KCGQL +REIF+S+ E Sbjct: 221 VSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHE 280 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DVI WNVMISGYG HGDA SA+E F QME S KP ++FLAVLSACAH GLV EGKYL Sbjct: 281 RDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYL 340 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F +M++ YS+AP LKHYACMVDLLGR+GNLQEAE++VLSM + PDGGVWGALL +C+IHN Sbjct: 341 FGKMQD-YSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHN 399 Query: 542 DFQMGEQVAWQAIESDPE 595 + +MG ++A AI+SD E Sbjct: 400 EIEMGIRIAKHAIDSDVE 417 Score = 71.2 bits (173), Expect = 2e-10 Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 4/197 (2%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVC-DLSVATALVNMYVKCGQLGIAREIFDSVTEK 184 ++A+C+ L ++++G+ +H + ++GL + V AL++MY K G L +A + F V E+ Sbjct: 139 IVASCAELELVNYGRSIHGLVSKLGLFSGNQMVQNALLSMYCKFGFLKLAEKFFGRVNEQ 198 Query: 185 DVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLF 364 + WN+M S F + +KP + ++VLSAC+H + EG Sbjct: 199 NFEAWNLMFS--------------FCE----DLKPNSATLVSVLSACSHLASLEEG---- 236 Query: 365 DRMRNYYS---IAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQI 535 +++ NY + L ++D+ + G L+++ + SM + D W ++ + Sbjct: 237 EKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMH-ERDVITWNVMISGYGM 295 Query: 536 HNDFQMGEQVAWQAIES 586 H D + + Q ES Sbjct: 296 HGDARSAIEFFQQMEES 312 Score = 56.2 bits (134), Expect = 7e-06 Identities = 26/99 (26%), Positives = 53/99 (53%) Frame = +2 Query: 59 HAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWNVMISGYGTHGDA 238 HA+I G ++ +A+ L+++Y + + E+FD + +D LWN +I + ++G+ Sbjct: 55 HAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEY 114 Query: 239 ASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 + AL+ + M S P + ++++CA LV G+ Sbjct: 115 SRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGR 153 >ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Vitis vinifera] Length = 744 Score = 265 bits (677), Expect = 7e-69 Identities = 128/198 (64%), Positives = 160/198 (80%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++VL+ACSHL L+ G++VH YI +LS+ATAL++MY KCGQL +REIF+S+ E Sbjct: 506 VSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHE 565 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DVI WNVMISGYG HGDA SA+E F QME S KP ++FLAVLSACAH GLV EGKYL Sbjct: 566 RDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYL 625 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F +M++ YS+AP LKHYACMVDLLGR+GNLQEAE++VLSM + PDGGVWGALL +C+IHN Sbjct: 626 FGKMQD-YSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHN 684 Query: 542 DFQMGEQVAWQAIESDPE 595 + +MG ++A AI+SD E Sbjct: 685 EIEMGIRIAKHAIDSDVE 702 Score = 82.0 bits (201), Expect = 1e-13 Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 3/191 (1%) Frame = +2 Query: 23 SHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWN 202 S G + +H Y+ + + ++SV +L++MY K G L IAR IF + +D++ WN Sbjct: 413 SGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP-RDIVTWN 471 Query: 203 VMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDRMRNY 382 +IS Y G A AL ++ +M +KP + ++VLSAC+H + EG +++ NY Sbjct: 472 TLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEG----EKVHNY 527 Query: 383 YS---IAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHNDFQM 553 + L ++D+ + G L+++ + SM + D W ++ +H D + Sbjct: 528 INGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMH-ERDVITWNVMISGYGMHGDARS 586 Query: 554 GEQVAWQAIES 586 + Q ES Sbjct: 587 AIEFFQQMEES 597 Score = 70.1 bits (170), Expect = 4e-10 Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 8/159 (5%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLS-VATALVNMYVKCGQLGIAREIFDSVTEK 184 ++A+C+ L ++++G+ +H + ++GL S V ++ V MY KCG L A +FD + + Sbjct: 139 IVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFR 198 Query: 185 DVILWNVMISGYGTHGDAASALEVFMQME---NSGVKPTDVSFLAVLSACAHTGLVAEGK 355 DV+ W ++ G +G++ LE +M G +P + AC + G + EG+ Sbjct: 199 DVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGR 258 Query: 356 YLFDRM----RNYYSIAPTLKHYACMVDLLGRAGNLQEA 460 L + +Y + +L ++ + + GN +EA Sbjct: 259 CLHGLVVKTGMDYSQVVQSL-----LLSMYSKCGNPEEA 292 Score = 69.7 bits (169), Expect = 6e-10 Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 1/150 (0%) Frame = +2 Query: 17 ACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVIL 196 AC +LG L G+ +H + + G+ V + L++MY KCG A F V KD+I Sbjct: 247 ACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIIS 306 Query: 197 WNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDR-M 373 W MIS Y G A +++F +M SG+ P + +LS+ +++ V E K + Sbjct: 307 WTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLII 366 Query: 374 RNYYSIAPTLKHYACMVDLLGRAGNLQEAE 463 R +Y++ +++ ++ + + G L+ AE Sbjct: 367 RRHYTLDQMVQN--ALLSMYCKFGFLKLAE 394 Score = 62.8 bits (151), Expect = 7e-08 Identities = 39/166 (23%), Positives = 79/166 (47%) Frame = +2 Query: 59 HAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWNVMISGYGTHGDA 238 HA+I G ++ +A+ L+++Y + + E+FD + +D LWN +I + ++G+ Sbjct: 55 HAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEY 114 Query: 239 ASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDRMRNYYSIAPTLKHYAC 418 + AL+ + M S P + ++++CA LV G+ + + + + + Sbjct: 115 SRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSS 174 Query: 419 MVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHNDFQMG 556 V + + G L+EA V + D W AL+ C + + +MG Sbjct: 175 FVYMYSKCGVLEEAYG-VFDEILFRDVVAWTALVIGCVQNGESKMG 219 >emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera] Length = 1111 Score = 263 bits (672), Expect = 3e-68 Identities = 128/196 (65%), Positives = 157/196 (80%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKD 187 VL+ACSHL L+ G++VH YI +LS+ATAL++MY KCGQL +REIF+S+ E+D Sbjct: 875 VLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERD 934 Query: 188 VILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFD 367 VI WNVMISGYG HGDA SA+E F QME S KP ++FLAVLSACAH GLV EGKYLF Sbjct: 935 VITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFG 994 Query: 368 RMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHNDF 547 +M++ YS+AP LKHYACMVDLLGR+GNLQEAE++VLSM + PDGGVWGALL +C+IHN+ Sbjct: 995 KMQD-YSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHNEI 1053 Query: 548 QMGEQVAWQAIESDPE 595 +MG ++A AI SD E Sbjct: 1054 EMGIRIAKHAIXSDVE 1069 Score = 90.9 bits (224), Expect = 2e-16 Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 3/198 (1%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++V+++CS LG + +H Y+ + + ++SV +L++MY K G L IAR IF + Sbjct: 773 VSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP- 831 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +D++ WN +IS Y G A AL ++ +M +KP + + VLSAC+H + EG Sbjct: 832 RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEG--- 888 Query: 362 FDRMRNYYS---IAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQ 532 +++ NY + L ++D+ + G L+++ + SM + D W ++ Sbjct: 889 -EKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMH-ERDVITWNVMISGYG 946 Query: 533 IHNDFQMGEQVAWQAIES 586 +H D + + Q ES Sbjct: 947 MHGDARSAIEXFQQMEES 964 Score = 70.5 bits (171), Expect = 3e-10 Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Frame = +2 Query: 17 ACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVIL 196 AC +LG L G+ +H + + G+ V ++L++MY KCG A F V KD+I Sbjct: 576 ACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDIIS 635 Query: 197 WNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDR-M 373 W MIS Y G A +++F +M SG+ P + +LS+ +++ V E K + Sbjct: 636 WTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLII 695 Query: 374 RNYYSIAPTLKHYACMVDLLGRAGNLQEAE 463 R +Y++ +++ ++ + + G L+ AE Sbjct: 696 RRHYTLDQMVQN--ALLSMYCKFGFLKLAE 723 Score = 64.7 bits (156), Expect = 2e-08 Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 1/160 (0%) Frame = +2 Query: 50 KRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWNVMISGYGTH 229 K H I D V AL++MY K G L +A + F V E++ WN+M+SGYG Sbjct: 688 KAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKI 747 Query: 230 GDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDRM-RNYYSIAPTLK 406 G + +F +M+ G++ S ++V+S+C+ G + + M +N ++ Sbjct: 748 GLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVN 807 Query: 407 HYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGA 526 + ++D+ G++GNL A + + D W L+ + Sbjct: 808 N--SLIDMYGKSGNLTIARR--IFCRIPRDIVTWNTLISS 843 >ref|XP_004978055.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Setaria italica] Length = 772 Score = 263 bits (671), Expect = 4e-68 Identities = 121/198 (61%), Positives = 161/198 (81%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 +TV++AC++L L+ G++VH+Y+KE+G D+S++TALV+MY KCGQLGIAR IFDS+ + Sbjct: 530 ITVISACANLVALERGEQVHSYVKEMGWESDVSISTALVDMYAKCGQLGIARRIFDSMLQ 589 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DV+ WNVMISGYG HG+A ALE+F +ME VKP V+FLA+LSAC H+G V EG+ L Sbjct: 590 RDVVAWNVMISGYGMHGEAKQALELFGEMERGSVKPNGVTFLAILSACCHSGFVEEGRKL 649 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F RM YS+ P LKHYACMVDLLG++G+LQEAE MVL+M V+PDGGVWG LL AC++H+ Sbjct: 650 FTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGVWGTLLSACKVHD 708 Query: 542 DFQMGEQVAWQAIESDPE 595 +F+MG ++A +A SDPE Sbjct: 709 NFEMGLRIAQKAFASDPE 726 Score = 87.4 bits (215), Expect = 3e-15 Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 1/182 (0%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++ +++CS L L G+ H Y + L +LSVA L+ MY +CG+ AR+IFD Sbjct: 428 VSAISSCSRLAELRLGRSAHCYSIKHLLDDNLSVANVLIGMYGRCGKFNNARKIFDLAKL 487 Query: 182 K-DVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKY 358 K DV+ WN +IS Y G + +A+ ++ QM G+KP + + V+SACA+ + G+ Sbjct: 488 KGDVVTWNALISSYAHLGHSNAAVSLYDQMLTEGLKPNSATLITVISACANLVALERGEQ 547 Query: 359 LFDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIH 538 + ++ + +VD+ + G L A + SM + D W ++ +H Sbjct: 548 VHSYVKE-MGWESDVSISTALVDMYAKCGQLGIARRIFDSM-LQRDVVAWNVMISGYGMH 605 Query: 539 ND 544 + Sbjct: 606 GE 607 Score = 82.4 bits (202), Expect = 9e-14 Identities = 44/115 (38%), Positives = 64/115 (55%) Frame = +2 Query: 11 LAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDV 190 L AC LG L+ G+ +H Y+ +IG+ VA+AL +MY KC A +F + EKDV Sbjct: 226 LEACGVLGELNSGRCLHGYVVKIGVGDSPLVASALFSMYSKCNSTEDAYILFSELPEKDV 285 Query: 191 ILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 + W +I Y G A+E+F +ME SGV+P +V +L+ + G V GK Sbjct: 286 VSWTSLIGAYCRRGLITEAIELFQEMEESGVQPDEVLVSCLLAGLGNIGNVRGGK 340 Score = 70.5 bits (171), Expect = 3e-10 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 8/124 (6%) Frame = +2 Query: 14 AACSHLGVLDHGKRVHAYIKEIGLVC----DLSVATALVNMYVKCGQLGIAREIFDSVTE 181 +A + LG L G VHAY GL+ ++VA++LV +Y +CG +G A ++F+ + E Sbjct: 118 SAAAELGALGVGASVHAYCVRCGLLVGDGGSVAVASSLVYVYARCGVVGDAVKVFEEMPE 177 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQM----ENSGVKPTDVSFLAVLSACAHTGLVAE 349 +DV+ W ++SG +G+ A L ++M + G +P + + L AC G + Sbjct: 178 RDVVAWTAVVSGCVRNGECAEGLRYLVEMIRLAGDGGARPNSRTMESGLEACGVLGELNS 237 Query: 350 GKYL 361 G+ L Sbjct: 238 GRCL 241 Score = 56.6 bits (135), Expect = 5e-06 Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 4/177 (2%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKD 187 +LA ++G + GK HA I + + AL++MY K + +A +F S+ ++D Sbjct: 326 LLAGLGNIGNVRGGKAFHAVITKRNFEDSVLTGNALISMYGKFELVDVAGRVFRSLHQQD 385 Query: 188 VILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFD 367 V WN+MI GY G LE++ +++ +++SA + +AE + Sbjct: 386 VESWNLMIVGYCKAGWDVQCLELYRELQFRDKDEFLCDANSLVSAISSCSRLAELR--LG 443 Query: 368 RMRNYYSIAPTLKHYACMVDLL----GRAGNLQEAESMVLSMTVDPDGGVWGALLGA 526 R + YSI L + ++L GR G A + + D W AL+ + Sbjct: 444 RSAHCYSIKHLLDDNLSVANVLIGMYGRCGKFNNARKIFDLAKLKGDVVTWNALISS 500 >gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group] Length = 897 Score = 262 bits (670), Expect = 5e-68 Identities = 116/198 (58%), Positives = 163/198 (82%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++V+++C++L L+HG+ +H+++K++GL CDLS+ TALV+MY+KCGQLGIAR++FDS+ E Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLE 584 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DV+ WNVMISGYG HG+A AL++F ME VKP ++FLA+LSAC H GLV +G+ L Sbjct: 585 RDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL 644 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F RM YS+ P LKHYACMVDLLG++G+LQEAE +V +M ++PDGG+WG LLGAC++H+ Sbjct: 645 FTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHD 703 Query: 542 DFQMGEQVAWQAIESDPE 595 +F+MG +VA +A SDPE Sbjct: 704 NFEMGLRVAKKAFASDPE 721 Score = 98.6 bits (244), Expect = 1e-18 Identities = 55/181 (30%), Positives = 97/181 (53%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++++++CS LG L G+ H Y + + SVA AL++MY +CG +AR+IF V Sbjct: 424 ISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKT 483 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 KDV+ W+ +IS Y G + AL ++ QM GVKP + ++V+S+CA+ + G+ + Sbjct: 484 KDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELI 543 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 +++ + L +VD+ + G L A M SM ++ D W ++ +H Sbjct: 544 HSHVKD-VGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMHG 601 Query: 542 D 544 + Sbjct: 602 E 602 Score = 72.0 bits (175), Expect = 1e-10 Identities = 40/115 (34%), Positives = 61/115 (53%) Frame = +2 Query: 11 LAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDV 190 L AC LG L G +H + + G+ SV ++L +MY KC AR +F + EKD+ Sbjct: 222 LEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDL 281 Query: 191 ILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 + W +I Y G A A+E+F+ ME SG++P +V +L+ + V GK Sbjct: 282 VSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGK 336 Score = 69.3 bits (168), Expect = 8e-10 Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 7/125 (5%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLV---CDLSVATALVNMYVKCGQLGIAREIFDSVT 178 V +A + LG L G VHAY GL+ ++VA++LV MY +CG + A +FD + Sbjct: 113 VASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMP 172 Query: 179 EKDVILWNVMISGYGTHGDAASALEVFMQMENS----GVKPTDVSFLAVLSACAHTGLVA 346 E+DV+ W +ISG +G L ++M S G +P + + L AC G ++ Sbjct: 173 ERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELS 232 Query: 347 EGKYL 361 G L Sbjct: 233 VGTCL 237 Score = 58.9 bits (141), Expect = 1e-06 Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 11/171 (6%) Frame = +2 Query: 47 GKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWNVMISGYGT 226 GK HA I + + AL++MY KC Q+ IA +F + ++D W+ M+ Y Sbjct: 335 GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCK 394 Query: 227 HGDAASALEVFMQM---ENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDRMRNYYSIAP 397 G LE++ +M + + S ++++S+C+ G + G + + YSI Sbjct: 395 AGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLG-----QSAHCYSI-- 447 Query: 398 TLKHYA--------CMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGA 526 KH A ++ + GR GN A + M D W AL+ + Sbjct: 448 --KHLAGENSSVANALISMYGRCGNFDVARK-IFGMVKTKDVVTWSALISS 495 >ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group] gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group] gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group] Length = 767 Score = 262 bits (670), Expect = 5e-68 Identities = 116/198 (58%), Positives = 163/198 (82%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++V+++C++L L+HG+ +H+++K++GL CDLS+ TALV+MY+KCGQLGIAR++FDS+ E Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLE 584 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DV+ WNVMISGYG HG+A AL++F ME VKP ++FLA+LSAC H GLV +G+ L Sbjct: 585 RDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL 644 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F RM YS+ P LKHYACMVDLLG++G+LQEAE +V +M ++PDGG+WG LLGAC++H+ Sbjct: 645 FTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHD 703 Query: 542 DFQMGEQVAWQAIESDPE 595 +F+MG +VA +A SDPE Sbjct: 704 NFEMGLRVAKKAFASDPE 721 Score = 98.6 bits (244), Expect = 1e-18 Identities = 55/181 (30%), Positives = 97/181 (53%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++++++CS LG L G+ H Y + + SVA AL++MY +CG +AR+IF V Sbjct: 424 ISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKT 483 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 KDV+ W+ +IS Y G + AL ++ QM GVKP + ++V+S+CA+ + G+ + Sbjct: 484 KDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELI 543 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 +++ + L +VD+ + G L A M SM ++ D W ++ +H Sbjct: 544 HSHVKD-VGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMHG 601 Query: 542 D 544 + Sbjct: 602 E 602 Score = 72.0 bits (175), Expect = 1e-10 Identities = 40/115 (34%), Positives = 61/115 (53%) Frame = +2 Query: 11 LAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDV 190 L AC LG L G +H + + G+ SV ++L +MY KC AR +F + EKD+ Sbjct: 222 LEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDL 281 Query: 191 ILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 + W +I Y G A A+E+F+ ME SG++P +V +L+ + V GK Sbjct: 282 VSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGK 336 Score = 69.3 bits (168), Expect = 8e-10 Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 7/125 (5%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLV---CDLSVATALVNMYVKCGQLGIAREIFDSVT 178 V +A + LG L G VHAY GL+ ++VA++LV MY +CG + A +FD + Sbjct: 113 VASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMP 172 Query: 179 EKDVILWNVMISGYGTHGDAASALEVFMQMENS----GVKPTDVSFLAVLSACAHTGLVA 346 E+DV+ W +ISG +G L ++M S G +P + + L AC G ++ Sbjct: 173 ERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELS 232 Query: 347 EGKYL 361 G L Sbjct: 233 VGTCL 237 Score = 58.9 bits (141), Expect = 1e-06 Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 11/171 (6%) Frame = +2 Query: 47 GKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWNVMISGYGT 226 GK HA I + + AL++MY KC Q+ IA +F + ++D W+ M+ Y Sbjct: 335 GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCK 394 Query: 227 HGDAASALEVFMQM---ENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDRMRNYYSIAP 397 G LE++ +M + + S ++++S+C+ G + G + + YSI Sbjct: 395 AGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLG-----QSAHCYSI-- 447 Query: 398 TLKHYA--------CMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGA 526 KH A ++ + GR GN A + M D W AL+ + Sbjct: 448 --KHLAGENSSVANALISMYGRCGNFDVARK-IFGMVKTKDVVTWSALISS 495 >emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group] Length = 918 Score = 262 bits (670), Expect = 5e-68 Identities = 116/198 (58%), Positives = 163/198 (82%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++V+++C++L L+HG+ +H+++K++GL CDLS+ TALV+MY+KCGQLGIAR++FDS+ E Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLE 584 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DV+ WNVMISGYG HG+A AL++F ME VKP ++FLA+LSAC H GLV +G+ L Sbjct: 585 RDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL 644 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F RM YS+ P LKHYACMVDLLG++G+LQEAE +V +M ++PDGG+WG LLGAC++H+ Sbjct: 645 FTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHD 703 Query: 542 DFQMGEQVAWQAIESDPE 595 +F+MG +VA +A SDPE Sbjct: 704 NFEMGLRVAKKAFASDPE 721 Score = 98.6 bits (244), Expect = 1e-18 Identities = 55/181 (30%), Positives = 97/181 (53%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++++++CS LG L G+ H Y + + SVA AL++MY +CG +AR+IF V Sbjct: 424 ISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKT 483 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 KDV+ W+ +IS Y G + AL ++ QM GVKP + ++V+S+CA+ + G+ + Sbjct: 484 KDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELI 543 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 +++ + L +VD+ + G L A M SM ++ D W ++ +H Sbjct: 544 HSHVKD-VGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMHG 601 Query: 542 D 544 + Sbjct: 602 E 602 Score = 72.0 bits (175), Expect = 1e-10 Identities = 40/115 (34%), Positives = 61/115 (53%) Frame = +2 Query: 11 LAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDV 190 L AC LG L G +H + + G+ SV ++L +MY KC AR +F + EKD+ Sbjct: 222 LEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDL 281 Query: 191 ILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 + W +I Y G A A+E+F+ ME SG++P +V +L+ + V GK Sbjct: 282 VSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGK 336 Score = 69.3 bits (168), Expect = 8e-10 Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 7/125 (5%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLV---CDLSVATALVNMYVKCGQLGIAREIFDSVT 178 V +A + LG L G VHAY GL+ ++VA++LV MY +CG + A +FD + Sbjct: 113 VASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMP 172 Query: 179 EKDVILWNVMISGYGTHGDAASALEVFMQMENS----GVKPTDVSFLAVLSACAHTGLVA 346 E+DV+ W +ISG +G L ++M S G +P + + L AC G ++ Sbjct: 173 ERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELS 232 Query: 347 EGKYL 361 G L Sbjct: 233 VGTCL 237 Score = 58.9 bits (141), Expect = 1e-06 Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 11/171 (6%) Frame = +2 Query: 47 GKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWNVMISGYGT 226 GK HA I + + AL++MY KC Q+ IA +F + ++D W+ M+ Y Sbjct: 335 GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCK 394 Query: 227 HGDAASALEVFMQM---ENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDRMRNYYSIAP 397 G LE++ +M + + S ++++S+C+ G + G + + YSI Sbjct: 395 AGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLG-----QSAHCYSI-- 447 Query: 398 TLKHYA--------CMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGA 526 KH A ++ + GR GN A + M D W AL+ + Sbjct: 448 --KHLAGENSSVANALISMYGRCGNFDVARK-IFGMVKTKDVVTWSALISS 495 >ref|XP_002307076.2| pentatricopeptide repeat-containing family protein, partial [Populus trichocarpa] gi|550338333|gb|EEE94072.2| pentatricopeptide repeat-containing family protein, partial [Populus trichocarpa] Length = 744 Score = 261 bits (667), Expect = 1e-67 Identities = 129/196 (65%), Positives = 154/196 (78%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKD 187 VL+AC HL L+ GK VH YIKE G ++S+ TALV+MY KCGQL +RE+F+S+ EKD Sbjct: 508 VLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKD 567 Query: 188 VILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFD 367 VI WNVMISGYG HGDA SA+EVF QME S VKP ++FL++LSAC H G V EGK LFD Sbjct: 568 VISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFD 627 Query: 368 RMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHNDF 547 RM+ YYSI P LKH+ACM DLLGR+GNLQEAE +V SM + PDGGVWG LL AC+IHN+ Sbjct: 628 RMQ-YYSIKPNLKHFACMADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIHNEI 686 Query: 548 QMGEQVAWQAIESDPE 595 ++G +VA AIESDPE Sbjct: 687 EIGIRVAKCAIESDPE 702 Score = 95.5 bits (236), Expect = 1e-17 Identities = 56/196 (28%), Positives = 105/196 (53%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++V+++CS LG+++ + VH YI + + D+S+A +L++MY K G L IA ++F T+ Sbjct: 406 VSVISSCSKLGLINLCRSVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCR-TQ 464 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DV+ WN +IS Y G A A+ +F +M + + P + + VLSAC H + +GK + Sbjct: 465 RDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMV 524 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 ++ + +VD+ + G L+++ + SM + D W ++ +H Sbjct: 525 HQYIKE-GGFELNVSLGTALVDMYAKCGQLEQSRELFNSMK-EKDVISWNVMISGYGLHG 582 Query: 542 DFQMGEQVAWQAIESD 589 D +V Q +S+ Sbjct: 583 DANSAMEVFQQMEQSN 598 Score = 74.7 bits (182), Expect = 2e-11 Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 4/178 (2%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLS-VATALVNMYVKCGQLGIAREIFDSVTEK 184 ++A C+ L L+ GK +H + + GL + S V ++ V MY KCG + A +FD + + Sbjct: 137 IVATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVR 196 Query: 185 DVILWNVMISGYGTHGDAASALEVFMQME---NSGVKPTDVSFLAVLSACAHTGLVAEGK 355 DV+ W ++ GY + D+ LE +M G K + AC + G + G+ Sbjct: 197 DVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGR 256 Query: 356 YLFDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGAC 529 L + + + + ++ + + GN++EA + VD D W +++G C Sbjct: 257 CLHG-LAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNS-FCQVVDKDVFSWTSVIGVC 312 Score = 65.1 bits (157), Expect = 1e-08 Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 1/152 (0%) Frame = +2 Query: 17 ACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVIL 196 AC +LG + G+ +H + GL C V ++L++MY KCG + A F V +KDV Sbjct: 245 ACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFS 304 Query: 197 WNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDR-M 373 W +I G L +F M+ V P + +L ++ +V EGK + Sbjct: 305 WTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIV 364 Query: 374 RNYYSIAPTLKHYACMVDLLGRAGNLQEAESM 469 R Y + T+ + ++ + + G L AE + Sbjct: 365 RRNYVLDDTVNN--ALLSMYCKFGTLNPAEKL 394 Score = 61.2 bits (147), Expect = 2e-07 Identities = 39/162 (24%), Positives = 76/162 (46%) Frame = +2 Query: 59 HAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWNVMISGYGTHGDA 238 HA I G ++ +++ L+++Y + + +FDS +KD LWN +I + ++G+ Sbjct: 53 HALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNY 112 Query: 239 ASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDRMRNYYSIAPTLKHYAC 418 A + ++QM P + +++ CA + EGKY+ + A + Sbjct: 113 FKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSS 172 Query: 419 MVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHND 544 V + + G +++A S++ V D W AL+ +HND Sbjct: 173 FVYMYAKCGVMEDA-SLMFDEIVVRDVVSWTALV-IGYVHND 212 >ref|XP_006653490.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Oryza brachyantha] Length = 774 Score = 256 bits (653), Expect = 4e-66 Identities = 117/197 (59%), Positives = 157/197 (79%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 +TV++AC++L L+ G+ +H+Y+K++GL CD+S++TALV+MY KCGQL IAREIFDS+ E Sbjct: 532 VTVISACANLVALERGELMHSYVKDMGLECDVSISTALVDMYTKCGQLHIAREIFDSMLE 591 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +D + WNVMISGYG HG+A AL++F ME VKP +++FLAVLSAC H GLV EG+ L Sbjct: 592 RDTVTWNVMISGYGMHGEAKQALKLFSMMEGGNVKPNNLTFLAVLSACCHAGLVDEGRKL 651 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F RM YS+ P LKHYACMVDLLG++G+L+EAE MV +M + PDGG+WG LLGAC++H Sbjct: 652 FTRMEE-YSVEPNLKHYACMVDLLGKSGHLEEAEDMVSAMPIKPDGGIWGTLLGACKMHG 710 Query: 542 DFQMGEQVAWQAIESDP 592 + +MG +VA +A SDP Sbjct: 711 NLEMGLRVATKAFASDP 727 Score = 91.7 bits (226), Expect = 1e-16 Identities = 53/182 (29%), Positives = 97/182 (53%), Gaps = 1/182 (0%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSV-T 178 ++++++CS LG L G+ H Y + + + SVA AL++MY CG+ +A +FD + T Sbjct: 430 VSIISSCSRLGRLRSGQSAHCYSIKHLIGENSSVANALISMYGMCGKFELALRLFDLIKT 489 Query: 179 EKDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKY 358 + DV+ WN +IS Y G + AL ++ QM GVKP + + V+SACA+ + G+ Sbjct: 490 KTDVVTWNALISSYSHLGYSKDALFLYDQMLTEGVKPNSTTLVTVISACANLVALERGEL 549 Query: 359 LFDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIH 538 + +++ + + +VD+ + G L A + SM ++ D W ++ +H Sbjct: 550 MHSYVKD-MGLECDVSISTALVDMYTKCGQLHIAREIFDSM-LERDTVTWNVMISGYGMH 607 Query: 539 ND 544 + Sbjct: 608 GE 609 Score = 67.0 bits (162), Expect = 4e-09 Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 7/125 (5%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLV---CDLSVATALVNMYVKCGQLGIAREIFDSVT 178 V +A + LG L G VHA GL+ ++VA++LV+MY +CG + A +FD + Sbjct: 119 VASAAAELGALQVGAAVHACSVRFGLLEGDGSVAVASSLVHMYARCGSVRDAVRLFDEMP 178 Query: 179 EKDVILWNVMISGYGTHGDAASALEVFMQMENS----GVKPTDVSFLAVLSACAHTGLVA 346 E DV+ W +ISG +G+ L ++M S G +P + + L AC G Sbjct: 179 ETDVVAWTAVISGCVRNGECGDGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGEQC 238 Query: 347 EGKYL 361 G+ L Sbjct: 239 AGRCL 243 Score = 67.0 bits (162), Expect = 4e-09 Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 1/116 (0%) Frame = +2 Query: 11 LAACSHLGVLDHGKRVHAY-IKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKD 187 L AC LG G+ +H Y +K C L V ++L +MY KC + A +F + EKD Sbjct: 228 LEACGVLGEQCAGRCLHGYGVKSAFGHCPL-VVSSLFSMYTKCDRTEDAWILFPELPEKD 286 Query: 188 VILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 ++ W +I Y G A+E+F+ ME SG++P +V +L+ + V GK Sbjct: 287 LVSWTSLIGAYCRRGHVEKAVELFLDMEESGLQPDEVVISCLLAGLGNNASVRRGK 342 Score = 56.2 bits (134), Expect = 7e-06 Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 7/180 (3%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKD 187 +LA + + GK HA + + + AL++MY KC Q+ IA +F + ++D Sbjct: 328 LLAGLGNNASVRRGKAFHAALVRRNFGNSVLIGNALISMYAKCKQVDIAGAVFKMLHQRD 387 Query: 188 VILWNVMISGYGTHGDAASALEVFMQME---NSGVKPTDVSFLAVLSACAHTGLVAEGKY 358 W+ M+ Y G LE + +M+ ++ +S ++++S+C+ G + G Sbjct: 388 ADSWSSMVVAYCKAGLDLKCLEFYREMQFRAKDELECDTISLVSIISSCSRLGRLRSG-- 445 Query: 359 LFDRMRNYYSIAPTLKHYA----CMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGA 526 + + YSI + + ++ + G G + A + + D W AL+ + Sbjct: 446 ---QSAHCYSIKHLIGENSSVANALISMYGMCGKFELALRLFDLIKTKTDVVTWNALISS 502 >ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor] gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor] Length = 772 Score = 255 bits (651), Expect = 8e-66 Identities = 116/198 (58%), Positives = 158/198 (79%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 +TV++AC++L L+ G+++H+Y+KE+G D+S+ TAL++MY KCGQLG AR IFDS+ + Sbjct: 530 ITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQ 589 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 DV+ WNVMISGYG HG+A ALE+F +ME +KP V+FLA+LSAC H+GL+ EG+ L Sbjct: 590 HDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQL 649 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F RM YS+ P LKHYACMVDLLG++G+LQEAE MVL+M V+PDGG+WG LL AC++H+ Sbjct: 650 FTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLSACKLHD 708 Query: 542 DFQMGEQVAWQAIESDPE 595 DF+MG ++A +A SD E Sbjct: 709 DFEMGLRIAKKAFASDAE 726 Score = 78.6 bits (192), Expect = 1e-12 Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++ +++CS L L G+ H Y + L D SVA L+ MY +CG+ A +IF Sbjct: 428 VSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKL 487 Query: 182 K-DVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKY 358 K DV+ WN +IS Y G + +A+ ++ QM G+ P + + V+SACA+ + G+ Sbjct: 488 KGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEK 547 Query: 359 LFDRMRNY---YSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGAC 529 + ++ Y ++ ++D+ + G L A + SM + D W ++ Sbjct: 548 IHSYVKEMGWDYDVSIN----TALIDMYAKCGQLGTARRIFDSM-LQHDVVAWNVMISGY 602 Query: 530 QIHND 544 +H + Sbjct: 603 GMHGE 607 Score = 72.8 bits (177), Expect = 7e-11 Identities = 41/115 (35%), Positives = 61/115 (53%) Frame = +2 Query: 11 LAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDV 190 L AC L L+ G+ +H Y ++G+ V +AL +MY KC A +F + EKDV Sbjct: 226 LEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDV 285 Query: 191 ILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 + W +I Y G A+E+F +M SG++P DV +LS ++G V GK Sbjct: 286 VSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGK 340 Score = 59.7 bits (143), Expect = 6e-07 Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 8/124 (6%) Frame = +2 Query: 14 AACSHLGVLDHGKRVHAYIKEIGLVC----DLSVATALVNMYVKCGQLGIAREIFDSVTE 181 +A + LG L G VHAY GL+ ++V ++LV MY +CG + A ++F+ + E Sbjct: 118 SAAAELGALGVGASVHAYCVRYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFEEMRE 177 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQM----ENSGVKPTDVSFLAVLSACAHTGLVAE 349 +DV+ W ++SG +G+ L ++M + +P + + L AC + Sbjct: 178 RDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNS 237 Query: 350 GKYL 361 G+ L Sbjct: 238 GRCL 241 >gb|EXB29469.1| hypothetical protein L484_022141 [Morus notabilis] Length = 778 Score = 254 bits (649), Expect = 1e-65 Identities = 126/195 (64%), Positives = 156/195 (80%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKD 187 VL+ CSHL LD G++VH +IKE GL +LS+ TALV+MY KCGQL +R +F+S+TEKD Sbjct: 542 VLSTCSHLASLDKGEKVHHHIKERGLEINLSLGTALVDMYAKCGQLEQSRGLFNSMTEKD 601 Query: 188 VILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFD 367 VI WNVMISGYG HGDA SA+++F MENS V P +++FLA+L AC H+GLV EG+ LF Sbjct: 602 VISWNVMISGYGMHGDAESAIQIFQDMENSDVIPNELTFLALLLACNHSGLVEEGQNLFH 661 Query: 368 RMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHNDF 547 +M++ YS+ P LKHYACMVDLLGR+GNLQEAE++VLSM V PDGGVWG+LL AC HN Sbjct: 662 KMQD-YSMKPNLKHYACMVDLLGRSGNLQEAEALVLSMPVSPDGGVWGSLLSACIKHNQN 720 Query: 548 QMGEQVAWQAIESDP 592 MG +VA +AIESDP Sbjct: 721 DMGVRVARRAIESDP 735 Score = 85.9 bits (211), Expect = 8e-15 Identities = 52/196 (26%), Positives = 100/196 (51%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++V+++C LG G+ +H Y+ + + ++SVA +L++MY K G+L +A +F + Sbjct: 440 VSVISSCCQLGATRLGRSLHCYVIKNFIDNNVSVANSLIDMYGKRGELTLAWRMFCRA-Q 498 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 KDV+ WN +IS Y G A+ +F +M + + P + VLS C+H + +G+ + Sbjct: 499 KDVVTWNTIISCYIHCGQFEEAIALFDKMISENLYPNSATLAMVLSTCSHLASLDKGEKV 558 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 ++ + L +VD+ + G L+++ + SMT + D W ++ +H Sbjct: 559 HHHIKE-RGLEINLSLGTALVDMYAKCGQLEQSRGLFNSMT-EKDVISWNVMISGYGMHG 616 Query: 542 DFQMGEQVAWQAIESD 589 D + Q+ SD Sbjct: 617 DAESAIQIFQDMENSD 632 Score = 84.0 bits (206), Expect = 3e-14 Identities = 43/122 (35%), Positives = 72/122 (59%), Gaps = 4/122 (3%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVA-TALVNMYVKCGQLGIAREIFDSVTEK 184 V+ +C+ L +LD GK H + ++GL+ +VA ++ V MY KCGQ+G A ++FD +T + Sbjct: 135 VVGSCADLMLLDCGKSFHGLVLKLGLLSGDNVAGSSFVYMYCKCGQMGDAYKVFDEITVR 194 Query: 185 DVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAV---LSACAHTGLVAEGK 355 DV+ W ++ GY +G++ LE +M SG + +F + AC + G +AEG+ Sbjct: 195 DVVSWTALVIGYVQNGESEKGLECLCEMHRSGGESERPNFRTLEGGFQACGNMGALAEGR 254 Query: 356 YL 361 L Sbjct: 255 CL 256 Score = 62.4 bits (150), Expect = 9e-08 Identities = 34/113 (30%), Positives = 58/113 (51%) Frame = +2 Query: 17 ACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVIL 196 AC ++G L G+ +H + + GL +V +++++MY KCG AR F VT KD++ Sbjct: 243 ACGNMGALAEGRCLHGLVVKTGLGSSEAVKSSILSMYSKCGTPVEARFSFCEVTNKDLLS 302 Query: 197 WNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 W +I Y G L +F +M+ G+ P ++ +L ++ V GK Sbjct: 303 WMSVIGVYTRFGLMNECLNLFQEMQIGGLFPDEIVISCMLWGFGNSMFVKPGK 355 Score = 61.6 bits (148), Expect = 2e-07 Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 5/169 (2%) Frame = +2 Query: 47 GKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWNVMISGYGT 226 GK HA I + V +L+ MY K G L IA ++F + + + MISGY Sbjct: 354 GKAFHALIIRRDYLLGEMVHNSLLFMYSKFGLLNIAEKLFSKMRQWTKESCSTMISGYSK 413 Query: 227 HGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLF-----DRMRNYYSI 391 G +A +E+F +M GV+ S ++V+S+C G G+ L + + N S+ Sbjct: 414 IGHSAKCIELFREMHLLGVEVNSDSLVSVISSCCQLGATRLGRSLHCYVIKNFIDNNVSV 473 Query: 392 APTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIH 538 A +L +D+ G+ G L A M D W ++ +C IH Sbjct: 474 ANSL------IDMYGKRGELTLAWRMF--CRAQKDVVTWNTII-SCYIH 513 >ref|XP_007047919.1| Pentatricopeptide repeat (PPR) superfamily protein, putative [Theobroma cacao] gi|508700180|gb|EOX92076.1| Pentatricopeptide repeat (PPR) superfamily protein, putative [Theobroma cacao] Length = 784 Score = 254 bits (648), Expect = 2e-65 Identities = 119/198 (60%), Positives = 156/198 (78%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 LTVL+ACSHL + G+ +H YIKE G S+ATAL++MY KCGQL +RE+F+S+ E Sbjct: 546 LTVLSACSHLASWEKGEIIHCYIKEEGYELCQSLATALIDMYAKCGQLENSRELFNSMKE 605 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 KD + WNVMISGYG HGDA SALE++ QME S VKP ++FL++L++CAH GLV EGK+L Sbjct: 606 KDAVSWNVMISGYGMHGDAKSALEIYQQMEKSNVKPNALTFLSLLNSCAHAGLVEEGKFL 665 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F RM ++ + P LKHYACMVDLLGR+GNLQ+AE++V+SM + PDGG+WGALL AC +HN Sbjct: 666 FGRM-EHFLLKPNLKHYACMVDLLGRSGNLQDAEALVMSMPISPDGGIWGALLCACVVHN 724 Query: 542 DFQMGEQVAWQAIESDPE 595 + +MG ++A A+ SDPE Sbjct: 725 EIEMGVRIAKCAVASDPE 742 Score = 93.2 bits (230), Expect = 5e-17 Identities = 55/197 (27%), Positives = 105/197 (53%), Gaps = 1/197 (0%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++V+ +CS LG + G +H I + +V ++++A +L++MY K G L IA IF+ T+ Sbjct: 446 VSVIFSCSELGAIRIGHSLHCNIVKSYMVDNITIANSLIDMYGKNGNLTIAWRIFNQ-TQ 504 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +D+I WN M+S Y G + A+ +F QM + + P + L VLSAC+H +G+ + Sbjct: 505 RDIITWNTMMSAYTRCGHFSEAIALFDQMISGNLTPNLATLLTVLSACSHLASWEKGEII 564 Query: 362 FDRMRNY-YSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIH 538 ++ Y + +L ++D+ + G L+ + + SM + D W ++ +H Sbjct: 565 HCYIKEEGYELCQSLA--TALIDMYAKCGQLENSRELFNSMK-EKDAVSWNVMISGYGMH 621 Query: 539 NDFQMGEQVAWQAIESD 589 D + ++ Q +S+ Sbjct: 622 GDAKSALEIYQQMEKSN 638 Score = 73.2 bits (178), Expect = 5e-11 Identities = 43/148 (29%), Positives = 77/148 (52%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKD 187 VL + + V D GK H + + D V AL++MY K G L IA ++F + + Sbjct: 348 VLGFGNFMSVCD-GKAFHGLLIRRNFLLDQIVHNALLSMYCKFGLLSIAEKLFGIIPNCN 406 Query: 188 VILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFD 367 WN+M+SGY +G ++E+F +M++ G++ SF++V+ +C+ G + G L Sbjct: 407 KESWNIMVSGYCKNGQEEQSIELFREMQHLGIETDLNSFVSVIFSCSELGAIRIGHSLHC 466 Query: 368 RMRNYYSIAPTLKHYACMVDLLGRAGNL 451 + Y + + ++D+ G+ GNL Sbjct: 467 NIVKSYMV-DNITIANSLIDMYGKNGNL 493 Score = 65.5 bits (158), Expect(2) = 8e-09 Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 5/123 (4%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLS-VATALVNMYVKCGQLGIAREIFDSVTEK 184 V +AC+ L GK VH + GL + S V ++ V MY KCG +G A +FD + K Sbjct: 140 VASACAELRWEGCGKYVHGLTLKFGLFAENSAVGSSFVYMYAKCGSMGDACLVFDEIIVK 199 Query: 185 DVILWNVMISGYGTHGDAASALEVFMQMENSG----VKPTDVSFLAVLSACAHTGLVAEG 352 DV+ W ++ GY +G++ AL+ M G +P + L AC + EG Sbjct: 200 DVVAWTALVIGYVQNGESEKALKRLRDMHRVGGDGEKRPNFRTLEGGLQACGSLCALYEG 259 Query: 353 KYL 361 K L Sbjct: 260 KCL 262 Score = 20.4 bits (41), Expect(2) = 8e-09 Identities = 6/11 (54%), Positives = 8/11 (72%) Frame = +1 Query: 391 CAHFEALCMHG 423 CA +E C+HG Sbjct: 254 CALYEGKCLHG 264 Score = 59.3 bits (142), Expect = 8e-07 Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 10/131 (7%) Frame = +2 Query: 11 LAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDV 190 L AC L L GK +H ++ + GL V +++++MY +CG +G + F V KD+ Sbjct: 247 LQACGSLCALYEGKCLHGFVVKTGLGFYPVVQSSILSMYSRCGSVGDSYASFSEVVHKDI 306 Query: 191 ILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDV----------SFLAVLSACAHTGL 340 I W +I Y G L++ +M+ G+ + +F++V A GL Sbjct: 307 ISWTSIIGVYARFGFLKECLDLISKMQVDGLCADGILISSIVLGFGNFMSVCDGKAFHGL 366 Query: 341 VAEGKYLFDRM 373 + +L D++ Sbjct: 367 LIRRNFLLDQI 377 >ref|XP_006578120.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like isoform X2 [Glycine max] gi|571449376|ref|XP_006578121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like isoform X3 [Glycine max] gi|571449378|ref|XP_003522424.2| PREDICTED: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like isoform X1 [Glycine max] gi|571449380|ref|XP_006578122.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like isoform X4 [Glycine max] gi|571449382|ref|XP_006578123.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like isoform X5 [Glycine max] gi|571449384|ref|XP_006578124.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like isoform X6 [Glycine max] Length = 754 Score = 253 bits (647), Expect = 2e-65 Identities = 121/198 (61%), Positives = 151/198 (76%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 + VL+ACSHL L+ G+RVH YI E G +L + TAL++MY KCGQL +R +FDS+ E Sbjct: 515 VVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMME 574 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 KDVI WN MISGYG +G A SALE+F ME S V P ++FL++LSACAH GLV EGKY+ Sbjct: 575 KDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHAGLVEEGKYM 634 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F RM++ YS+ P LKHY CMVDLLGR GN+QEAE+MVLSM + PDGGVWGALLG C+ HN Sbjct: 635 FARMKS-YSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLSMPISPDGGVWGALLGHCKTHN 693 Query: 542 DFQMGEQVAWQAIESDPE 595 +MG ++A AI+ +PE Sbjct: 694 QIEMGIRIAKYAIDLEPE 711 Score = 79.7 bits (195), Expect = 6e-13 Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 1/173 (0%) Frame = +2 Query: 5 TVLAACSHLGVLDHGKRVHA-YIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 + +A+C+ LG ++ G+ +H IK ++SV +LV MY KCG++ A IF++ +E Sbjct: 415 SAIASCAQLGAVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIFNT-SE 473 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 DV+ WN +IS + A+ +F +M KP + + VLSAC+H + +G+ + Sbjct: 474 TDVVSWNTLISSHVHIKQHEEAVNLFSKMVREDQKPNTATLVVVLSACSHLASLEKGERV 533 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALL 520 + N L ++D+ + G LQ++ MV ++ D W A++ Sbjct: 534 HCYI-NESGFTLNLPLGTALIDMYAKCGQLQKSR-MVFDSMMEKDVICWNAMI 584 Score = 68.6 bits (166), Expect = 1e-09 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 3/121 (2%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKD 187 V++A +HL +L HG +HA + GL + + V++Y +CG++ +AR++FD + ++D Sbjct: 116 VVSAAAHLTLLPHGASLHALASKTGL---FHSSASFVSLYSRCGRMELARKVFDEIPKRD 172 Query: 188 VILWNVMISGYGTHGDAASALEVFMQME---NSGVKPTDVSFLAVLSACAHTGLVAEGKY 358 V+ W +I G+ +G+ L + KP ++ AC + G V+EG Sbjct: 173 VVAWTALIIGHVHNGEPEKGLRCLRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSC 232 Query: 359 L 361 L Sbjct: 233 L 233 Score = 57.4 bits (137), Expect = 3e-06 Identities = 40/160 (25%), Positives = 71/160 (44%) Frame = +2 Query: 47 GKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWNVMISGYGT 226 GK H I V D V +L+ MY K G L +A IF + + WN M+ GYG Sbjct: 329 GKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIFP-LCQGSGDGWNFMVFGYGK 387 Query: 227 HGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDRMRNYYSIAPTLK 406 G+ +E+F +M+ G+ + + +++CA G V G+ + + + + Sbjct: 388 VGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNIS 447 Query: 407 HYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGA 526 +V++ G+ G + A + T + D W L+ + Sbjct: 448 VTNSLVEMYGKCGKMTFA--WRIFNTSETDVVSWNTLISS 485 Score = 56.2 bits (134), Expect = 7e-06 Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 1/124 (0%) Frame = +2 Query: 17 ACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVIL 196 AC +LG + G +H + + G+ + +++++MY KCG A F V KD++ Sbjct: 220 ACGNLGAVSEGSCLHGVVVKNGVAS--FIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLC 277 Query: 197 WNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFD-RM 373 W +I Y G L +F +M+ + ++P V VLS ++ V +GK + Sbjct: 278 WTSVIGVYARIGMMGECLRLFREMQENEIRPDGVVVGCVLSGFGNSMDVFQGKAFHGVII 337 Query: 374 RNYY 385 R YY Sbjct: 338 RRYY 341 >gb|EMT33720.1| hypothetical protein F775_11239 [Aegilops tauschii] Length = 711 Score = 253 bits (645), Expect = 4e-65 Identities = 114/197 (57%), Positives = 156/197 (79%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 +TV++AC++L L+HG+ +H+Y+K++GL D+S++T+LV+MY KCGQLGIAR IFDS+ Sbjct: 428 ITVISACANLAALEHGELIHSYVKDMGLESDVSISTSLVDMYTKCGQLGIARGIFDSMLV 487 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DV+ WNVMI+GYG HGD AL++F +ME +KP V+FLA+LSAC H G V EG+ L Sbjct: 488 RDVVTWNVMIAGYGMHGDVKQALQLFSEMERGTIKPNSVTFLAILSACCHAGYVDEGRKL 547 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F RM Y + P LKHYACMVDLLG++G+LQEAE M+L+M + PDGGVWG LL AC++H+ Sbjct: 548 FIRM-GEYCLEPNLKHYACMVDLLGKSGHLQEAEDMILAMPIQPDGGVWGTLLSACKMHD 606 Query: 542 DFQMGEQVAWQAIESDP 592 +F+MG +VA +A SDP Sbjct: 607 NFEMGLRVAKKAFASDP 623 Score = 91.3 bits (225), Expect = 2e-16 Identities = 53/189 (28%), Positives = 99/189 (52%), Gaps = 1/189 (0%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFD-SVT 178 ++ +++CS LG L G+ H + + L+ ++SVA AL+ MY +CG+ +A +IF + Sbjct: 327 VSTISSCSRLGKLRLGQSAHCFSIKC-LLDEISVANALIGMYGRCGKFDLAYKIFGVAKV 385 Query: 179 EKDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKY 358 +DV+ WN ++S Y G + AL ++ QM GV+P + + V+SACA+ + G+ Sbjct: 386 RRDVVTWNALLSSYSHLGHSNDALSLYDQMLTEGVQPNSATLITVISACANLAALEHGEL 445 Query: 359 LFDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIH 538 + +++ + + +VD+ + G L A + SM V D W ++ +H Sbjct: 446 IHSYVKD-MGLESDVSISTSLVDMYTKCGQLGIARGIFDSMLV-RDVVTWNVMIAGYGMH 503 Query: 539 NDFQMGEQV 565 D + Q+ Sbjct: 504 GDVKQALQL 512 Score = 75.5 bits (184), Expect = 1e-11 Identities = 43/115 (37%), Positives = 62/115 (53%) Frame = +2 Query: 11 LAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDV 190 L AC LG L G+ +H Y + G+ V +AL +MY KC + A +F + EKDV Sbjct: 125 LEACGVLGELSAGRCLHGYTVKEGIGDCALVVSALFSMYSKCDRTEDACVLFPELPEKDV 184 Query: 191 ILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 + W +I Y G A+E+F +ME SG++P +V VLS ++G V GK Sbjct: 185 VTWTSLIGTYCRRGLDREAVELFQEMEVSGLQPDEVLVSCVLSGLGNSGNVRRGK 239 Score = 68.2 bits (165), Expect = 2e-09 Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 7/123 (5%) Frame = +2 Query: 14 AACSHLGVLDHGKRVHAYIKEIGLVC---DLSVATALVNMYVKCGQLGIAREIFDSVTEK 184 +A + L L G VHAY ++GL+ L+V+++LV MY +CG + A ++FD + E+ Sbjct: 18 SAAAELAALPVGSSVHAYSVKLGLLVGDGSLAVSSSLVYMYARCGCIDDAMKLFDEMAER 77 Query: 185 DVILWNVMISGYGTHGDAASALEVFMQM----ENSGVKPTDVSFLAVLSACAHTGLVAEG 352 DVI W ++SG + + + +QM + G +P + + L AC G ++ G Sbjct: 78 DVITWTAVVSGCVRNDECEKGMRYLVQMVRLAGDGGARPNSRTMESGLEACGVLGELSAG 137 Query: 353 KYL 361 + L Sbjct: 138 RCL 140 >gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays] Length = 773 Score = 252 bits (644), Expect = 5e-65 Identities = 114/198 (57%), Positives = 159/198 (80%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 +TV++AC++L L+ G+++H+Y+KE+G D+S+ TAL++MY KCGQLGIAR IFDS+ + Sbjct: 531 ITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQ 590 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 DV+ WNVMISGYG HG+A ALE+F +ME +KP V+FLA+LSA H+GL+ EG+ + Sbjct: 591 HDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKV 650 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F RM YS+ P LKHYACMVDLLG++G+LQEAE MVL+M ++PDGG+WG LL AC++H+ Sbjct: 651 FTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHD 709 Query: 542 DFQMGEQVAWQAIESDPE 595 +F+MG ++A +A SDPE Sbjct: 710 NFEMGLRIAKKAFASDPE 727 Score = 77.4 bits (189), Expect = 3e-12 Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 4/185 (2%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++ +++CS L L G+ H Y + L D SVA L+ MY +CG+ A +IF Sbjct: 429 VSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKL 488 Query: 182 K-DVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKY 358 K DV+ WN +IS Y G + +A+ ++ QM G+ P + + V+SACA+ + G+ Sbjct: 489 KGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEK 548 Query: 359 LFDRMRNY---YSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGAC 529 + ++ Y ++ ++D+ + G L A + SM + D W ++ Sbjct: 549 IHSYVKEMGWDYDVSIN----TALIDMYAKCGQLGIARRIFDSM-LQHDVVAWNVMISGY 603 Query: 530 QIHND 544 +H + Sbjct: 604 GMHGE 608 Score = 73.6 bits (179), Expect = 4e-11 Identities = 41/115 (35%), Positives = 61/115 (53%) Frame = +2 Query: 11 LAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDV 190 L AC L L+ G+ +H Y+ ++G+ V +AL +MY KC A +F + EKDV Sbjct: 227 LEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDV 286 Query: 191 ILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 + W +I Y G A+E+F QM SG++P ++ VLS + G V GK Sbjct: 287 VSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGK 341 Score = 65.1 bits (157), Expect = 1e-08 Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 8/124 (6%) Frame = +2 Query: 14 AACSHLGVLDHGKRVHAYIKEIGLVC----DLSVATALVNMYVKCGQLGIAREIFDSVTE 181 +A + LG L G VHAY GL+ ++VA++LV MY +CG + A ++F+ + E Sbjct: 119 SASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFEEMPE 178 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQM----ENSGVKPTDVSFLAVLSACAHTGLVAE 349 +DV+ W +ISG +G++ L ++M + V+P + + L AC + Sbjct: 179 RDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNS 238 Query: 350 GKYL 361 G+ L Sbjct: 239 GRCL 242 >ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Brachypodium distachyon] Length = 773 Score = 251 bits (642), Expect = 8e-65 Identities = 115/197 (58%), Positives = 156/197 (79%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 +TV++AC++L L+HG+ +H+Y+K +GL D+S++TALV+MY KCGQLG AR IFDS+ + Sbjct: 531 ITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQ 590 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DV+ WNVMISGYG HG+A AL++F +ME +KP ++FLA+LSAC H GLV EG+ L Sbjct: 591 RDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKL 650 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F RM Y + P LKHYACMVDLLG++G LQEAE +VL+M + PDGGVWG LL AC++H+ Sbjct: 651 FIRMGG-YRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACKVHD 709 Query: 542 DFQMGEQVAWQAIESDP 592 +F+MG +VA +A SDP Sbjct: 710 NFEMGLRVAKKAFSSDP 726 Score = 85.9 bits (211), Expect = 8e-15 Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 1/182 (0%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFD-SVT 178 ++ +++CS LG L G+ VH Y + L+ + S+ +L+ MY +CG +A +IF + Sbjct: 430 VSAISSCSRLGRLRLGQSVHCYSIKC-LLDENSITNSLIGMYGRCGNFELACKIFAVAKL 488 Query: 179 EKDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKY 358 +DV+ WN +IS Y G + AL ++ QM VKP + + V+SACA+ + G+ Sbjct: 489 RRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGEL 548 Query: 359 LFDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIH 538 L ++N + + +VD+ + G L A + SM + D W ++ +H Sbjct: 549 LHSYVKN-MGLESDVSISTALVDMYTKCGQLGTARGIFDSM-LQRDVVTWNVMISGYGMH 606 Query: 539 ND 544 + Sbjct: 607 GE 608 Score = 77.0 bits (188), Expect = 4e-12 Identities = 44/115 (38%), Positives = 61/115 (53%) Frame = +2 Query: 11 LAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDV 190 L AC LG L G+ +H Y + G+ V +AL +MY KC A +F +TEKDV Sbjct: 228 LEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPELTEKDV 287 Query: 191 ILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 + W +I Y G A A+E+F +ME SG++P +V VLS + V GK Sbjct: 288 VSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNRGK 342 Score = 73.2 bits (178), Expect = 5e-11 Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 10/181 (5%) Frame = +2 Query: 14 AACSHLGVLDHGKRVHAYIKEIGLVC---DLSVATALVNMYVKCGQLGIAREIFDSVTEK 184 +A + L L G VH+Y + GL+ ++V+++LV MY +CG LG A ++FD + E+ Sbjct: 121 SAAAELAALPVGTSVHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVER 180 Query: 185 DVILWNVMISGYGTHGDAASALEVFMQM----ENSGVKPTDVSFLAVLSACAHTGLVAEG 352 DV+ W ++SG +G+ + +QM +SG +P + + L AC G ++ G Sbjct: 181 DVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAG 240 Query: 353 KYLFDRMRNYYSIAPTLKHYACMVDLL---GRAGNLQEAESMVLSMTVDPDGGVWGALLG 523 + L + Y++ ++ A +V L ++ E ++ + D W L+G Sbjct: 241 RCL-----HGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIG 295 Query: 524 A 526 A Sbjct: 296 A 296 >ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 758 Score = 247 bits (631), Expect = 2e-63 Identities = 118/198 (59%), Positives = 152/198 (76%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 + VL+ACSHL L+ G+R+H YI E G +L + TALV+MY KCGQL +RE+FDS+ E Sbjct: 519 VVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMME 578 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 KDVI WN MISGYG +G A SA+E+F ME S VKP +++FL++LSACAH GLV EGK + Sbjct: 579 KDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNV 638 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F +M++ YS+ P LKHY CMVDLLGR+ NL+EAE +VLSM + PDGGVWGALL AC+ HN Sbjct: 639 FAKMQS-YSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHN 697 Query: 542 DFQMGEQVAWQAIESDPE 595 +MG ++ AI+S+PE Sbjct: 698 QIEMGIRIGKNAIDSEPE 715 Score = 78.2 bits (191), Expect = 2e-12 Identities = 51/175 (29%), Positives = 94/175 (53%), Gaps = 2/175 (1%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++ +A+C LG ++ G+ +H + + + +SV +L+ MY KC ++ ++ IF+ +E Sbjct: 419 VSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SE 477 Query: 182 KDVILWNVMISG--YGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 +DVILWN +IS + H + A +L M ME+ P + + VLSAC+H + +G+ Sbjct: 478 RDVILWNALISAHIHVKHYEEAISLFDIMIMEDQ--NPNTATLVVVLSACSHLAFLEKGE 535 Query: 356 YLFDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALL 520 L R N L +VD+ + G L+++ + SM ++ D W A++ Sbjct: 536 RL-HRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSM-MEKDVICWNAMI 588 Score = 60.1 bits (144), Expect = 5e-07 Identities = 34/113 (30%), Positives = 57/113 (50%) Frame = +2 Query: 17 ACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVIL 196 AC +LG L G+ +H + + G+ C L + +++++MY KCG A + F V KD++ Sbjct: 223 ACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLS 282 Query: 197 WNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGK 355 W MI Y G + + F +M + V P + +LS ++ V GK Sbjct: 283 WTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGK 335 Score = 57.4 bits (137), Expect = 3e-06 Identities = 37/160 (23%), Positives = 73/160 (45%) Frame = +2 Query: 47 GKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVILWNVMISGYGT 226 GK H I D V +L++MY K G L A +F ++ + WN MI GYG Sbjct: 334 GKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR-SQGSIEYWNFMIVGYGR 392 Query: 227 HGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDRMRNYYSIAPTLK 406 G +++F +M+ G++ V ++ +++C G + G+ + + + + T+ Sbjct: 393 IGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGF-VDETIS 451 Query: 407 HYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGA 526 ++++ G+ + S + + D +W AL+ A Sbjct: 452 VTNSLIEMYGKCDKMN--VSWRIFNRSERDVILWNALISA 489 Score = 57.0 bits (136), Expect = 4e-06 Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 4/122 (3%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLS-VATALVNMYVKCGQLGIAREIFDSVTEK 184 V ++ +H ++ G +HA ++G + S V ++ V++Y +C ++ A ++FD + + Sbjct: 115 VASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVR 174 Query: 185 DVILWNVMISGYGTHGDAASALEVFMQMENSG---VKPTDVSFLAVLSACAHTGLVAEGK 355 DV+ W ++ GY +G++ LE +M G KP + AC + G + G+ Sbjct: 175 DVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGR 234 Query: 356 YL 361 L Sbjct: 235 CL 236 >ref|XP_007136958.1| hypothetical protein PHAVU_009G088300g [Phaseolus vulgaris] gi|561010045|gb|ESW08952.1| hypothetical protein PHAVU_009G088300g [Phaseolus vulgaris] Length = 750 Score = 244 bits (623), Expect = 1e-62 Identities = 118/198 (59%), Positives = 150/198 (75%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 + VL+ACSHL L+ G+RVH YI E +L + TALV+MY KCGQL +R +FDS+ E Sbjct: 511 VVVLSACSHLASLEKGERVHRYINESSFRLNLPLGTALVDMYAKCGQLQKSRMVFDSMME 570 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 KD I WN MISGYG +G A SALE+F +ME S V P +++FL++LSACAH GL EGKY+ Sbjct: 571 KDEICWNAMISGYGMNGYAESALEIFRRMEESNVMPNEITFLSLLSACAHAGLAEEGKYV 630 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 F RM + YS++P LKHY CMVDLLGR+GNLQEA++MVLSM + PD GVWGALLG C+ +N Sbjct: 631 FARMLS-YSLSPNLKHYTCMVDLLGRSGNLQEAKAMVLSMPISPDSGVWGALLGHCKTYN 689 Query: 542 DFQMGEQVAWQAIESDPE 595 +MG +A AI+S+PE Sbjct: 690 QVEMGISIATYAIDSEPE 707 Score = 79.0 bits (193), Expect = 1e-12 Identities = 49/173 (28%), Positives = 93/173 (53%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++ +A+C+ LG ++ G+ +H + + L ++SV +L+ MY KCG++ A IF+ ++ Sbjct: 412 VSAVASCAQLGAVNLGRSIHCNVIKGFLDGNISVTNSLIEMYGKCGKMTFAWRIFNR-SQ 470 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DV+ WN +IS + A+ +F +M +P + + VLSAC+H + +G+ + Sbjct: 471 RDVVSWNTLISCHVHIKQHEEAVNLFNRMVKD-QQPNTATLVVVLSACSHLASLEKGERV 529 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALL 520 R N S L +VD+ + G LQ++ MV ++ D W A++ Sbjct: 530 -HRYINESSFRLNLPLGTALVDMYAKCGQLQKSR-MVFDSMMEKDEICWNAMI 580 Score = 64.3 bits (155), Expect = 2e-08 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 3/121 (2%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKD 187 V++A +HL +L HG +HA + GL S AT+ V+ Y +CG++ A ++FD + +D Sbjct: 113 VVSASAHLSLLPHGTSLHALAFKTGLFH--SSATSFVSFYSRCGEMDRACKVFDEIPVRD 170 Query: 188 VILWNVMISGYGTHGDAASALEVFMQMENSG---VKPTDVSFLAVLSACAHTGLVAEGKY 358 V W +I G+ +G+ L+ M G KP ++ AC + G EG Sbjct: 171 VAAWTALIIGHVHNGEPEKGLKCLRDMHEVGEDTQKPNVRTWEGGFLACGNLGAAREGAC 230 Query: 359 L 361 L Sbjct: 231 L 231 >ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Cucumis sativus] Length = 754 Score = 241 bits (616), Expect = 9e-62 Identities = 111/198 (56%), Positives = 155/198 (78%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 + VL+AC+HL LD G+++H YIKE G ++++ TAL++MY KCG+L +R++F+S E Sbjct: 516 IIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEE 575 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DVILWNVMIS YG HG SA+E+F ME S +KP +FL++LSAC HTG V EG++L Sbjct: 576 RDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHL 635 Query: 362 FDRMRNYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIHN 541 FDRM+ Y I P+LKHYA ++DLLGR+G+L+ AE++VLSM + PDG VWG+LL AC+IHN Sbjct: 636 FDRMQK-YGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHN 694 Query: 542 DFQMGEQVAWQAIESDPE 595 +F++G ++A AIESDP+ Sbjct: 695 EFEVGVRLARYAIESDPK 712 Score = 94.0 bits (232), Expect = 3e-17 Identities = 52/189 (27%), Positives = 101/189 (53%), Gaps = 1/189 (0%) Frame = +2 Query: 2 LTVLAACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTE 181 ++V+++CS +G ++ G+ +H Y + ++ ++SVA +L++MY K G + IF + Sbjct: 415 VSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQ 474 Query: 182 KDVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYL 361 +DVI WN +IS Y G A A+ +F +M V P V+ + VLSACAH + EG+ + Sbjct: 475 RDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKI 534 Query: 362 FDRMR-NYYSIAPTLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGACQIH 538 ++ N + T++ ++D+ + G L E + + T + D +W ++ +H Sbjct: 535 HQYIKENGFESNITIR--TALIDMYAKCGEL-ETSRKLFNSTEERDVILWNVMISNYGMH 591 Query: 539 NDFQMGEQV 565 + ++ Sbjct: 592 GHVESAMEI 600 Score = 71.6 bits (174), Expect = 2e-10 Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 2/153 (1%) Frame = +2 Query: 8 VLAACSHLGVLDHGKRVHAYIKEIGL-VCDLSVATALVNMYVKCGQLGIAREIFDSVTEK 184 V++ C+ L + +HG +H ++GL V + ++ ++ + MY KCG + A +F +T K Sbjct: 114 VVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVK 173 Query: 185 DVILWNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLF 364 DV+ W +I GY + ++ L+ +M G P + + AC + EGK L Sbjct: 174 DVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLH 233 Query: 365 D-RMRNYYSIAPTLKHYACMVDLLGRAGNLQEA 460 ++N + +K + ++ + R G+ +EA Sbjct: 234 GLALKNGFLCFEVVK--STILSMYSRCGSPEEA 264 Score = 58.9 bits (141), Expect = 1e-06 Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 5/150 (3%) Frame = +2 Query: 17 ACSHLGVLDHGKRVHAYIKEIGLVCDLSVATALVNMYVKCGQLGIAREIFDSVTEKDVIL 196 AC L L GK +H + G +C V + +++MY +CG A F + +KD+I Sbjct: 219 ACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLIS 278 Query: 197 WNVMISGYGTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLFDRMR 376 W +I+ + G + L +F +M+ S + P ++ +L ++ + EGK R+ Sbjct: 279 WTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARIL 338 Query: 377 NYYSIAPTLKHYA-----CMVDLLGRAGNL 451 + H A C LG A + Sbjct: 339 KQCCALSGITHNALLSMYCKFGHLGTANKI 368 Score = 56.6 bits (135), Expect = 5e-06 Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 3/163 (1%) Frame = +2 Query: 47 GKRVHAYIKEIGLVCDLSVAT--ALVNMYVKCGQLGIAREIFDSVTEKDVILWNVMISGY 220 GK HA I + C LS T AL++MY K G LG A +IF S K W+ MI GY Sbjct: 330 GKAFHARI--LKQCCALSGITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMILGY 386 Query: 221 GTHGDAASALEVFMQMENSGVKPTDVSFLAVLSACAHTGLVAEGKYLF-DRMRNYYSIAP 397 G + +M G +P S ++V+S+C+ G + G+ + ++N SI Sbjct: 387 SNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKN--SIIE 444 Query: 398 TLKHYACMVDLLGRAGNLQEAESMVLSMTVDPDGGVWGALLGA 526 + ++D+ G++G++ A + T+ D W L+ + Sbjct: 445 NVSVANSLMDMYGKSGHV-TATWRIFHRTLQRDVISWNTLISS 486