BLASTX nr result
ID: Cocculus22_contig00028087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00028087
(398 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007211368.1| hypothetical protein PRUPE_ppa002507mg [Prun... 89 6e-16
ref|XP_004295517.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
ref|XP_006855880.1| hypothetical protein AMTR_s00037p00138240 [A... 82 6e-14
ref|XP_002297917.1| hypothetical protein POPTR_0001s12190g [Popu... 81 2e-13
ref|XP_002304600.2| hypothetical protein POPTR_0003s15360g [Popu... 80 4e-13
ref|XP_006283284.1| hypothetical protein CARUB_v10004320mg [Caps... 79 8e-13
ref|XP_006468575.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_006448599.1| hypothetical protein CICLE_v10014519mg [Citr... 77 2e-12
ref|XP_006363176.1| PREDICTED: pentatricopeptide repeat-containi... 76 4e-12
ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
gb|EYU22630.1| hypothetical protein MIMGU_mgv1a021685mg, partial... 74 2e-11
ref|XP_006404148.1| hypothetical protein EUTSA_v10010168mg [Eutr... 72 8e-11
ref|XP_004232626.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,... 72 8e-11
ref|NP_193742.1| pentatricopeptide repeat-containing protein [Ar... 71 1e-10
ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata] g... 71 2e-10
ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_007138861.1| hypothetical protein PHAVU_009G243700g [Phas... 68 1e-09
emb|CBI27232.3| unnamed protein product [Vitis vinifera] 67 2e-09
ref|XP_004487899.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
>ref|XP_007211368.1| hypothetical protein PRUPE_ppa002507mg [Prunus persica]
gi|462407233|gb|EMJ12567.1| hypothetical protein
PRUPE_ppa002507mg [Prunus persica]
Length = 664
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/60 (68%), Positives = 51/60 (85%)
Frame = +2
Query: 215 NEEKSEPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRVF 394
N +++EPP++ EIF+ G KLGSYK GD TF SLIE+YA+ GDF SLE+VLDRMKRE+RVF
Sbjct: 59 NNDETEPPISNEIFKKGTKLGSYKSGDSTFYSLIENYANLGDFRSLEQVLDRMKRERRVF 118
>ref|XP_004295517.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Fragaria vesca subsp. vesca]
Length = 647
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = +2
Query: 221 EKSEPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRVF 394
E+ +PP++EEIFR GP G+YK GD TF SLIE+YA GDF SLE+VLDRMKRE+RVF
Sbjct: 42 EEPDPPISEEIFRKGPNFGAYKSGDSTFYSLIENYASLGDFGSLEKVLDRMKRERRVF 99
>ref|XP_006855880.1| hypothetical protein AMTR_s00037p00138240 [Amborella trichopoda]
gi|548859701|gb|ERN17347.1| hypothetical protein
AMTR_s00037p00138240 [Amborella trichopoda]
Length = 649
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = +2
Query: 218 EEKSEPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRVF 394
E++ EPP+AEEIFR P +G YKQGD TF SL+++YADSGDF L +V RMKRE RVF
Sbjct: 47 EDEEEPPVAEEIFRGAPTMGPYKQGDSTFFSLVQTYADSGDFVLLNQVFTRMKRENRVF 105
>ref|XP_002297917.1| hypothetical protein POPTR_0001s12190g [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| hypothetical protein
POPTR_0001s12190g [Populus trichocarpa]
Length = 670
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/60 (61%), Positives = 51/60 (85%)
Frame = +2
Query: 212 ENEEKSEPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRV 391
EN + +PP++++IF+SGPK+GSY+ GD TF SLI +YA+ GDF+SLE+VLDRMK E+RV
Sbjct: 63 ENGIEPDPPISDKIFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRV 122
>ref|XP_002304600.2| hypothetical protein POPTR_0003s15360g [Populus trichocarpa]
gi|550343237|gb|EEE79579.2| hypothetical protein
POPTR_0003s15360g [Populus trichocarpa]
Length = 672
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/60 (60%), Positives = 52/60 (86%)
Frame = +2
Query: 212 ENEEKSEPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRV 391
E+ + +PP++++IF+SGPK+GSYK GD TF SLI++YA+ GDF+SLE+VLDRM+ E+RV
Sbjct: 64 EHGIEHDPPISDKIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRV 123
>ref|XP_006283284.1| hypothetical protein CARUB_v10004320mg [Capsella rubella]
gi|482551989|gb|EOA16182.1| hypothetical protein
CARUB_v10004320mg [Capsella rubella]
Length = 660
Score = 78.6 bits (192), Expect = 8e-13
Identities = 40/89 (44%), Positives = 55/89 (61%)
Frame = +2
Query: 131 LYSSPCKFLQHRCCXXXXXXXXXXXTCENEEKSEPPLAEEIFRSGPKLGSYKQGDLTFNS 310
L S P KF H + E E SE P++E +F+S PK+GSYK GD T +S
Sbjct: 23 LSSDPVKFSIHHLRFSSSVSVSPDPSMEVENPSEAPISENMFKSAPKMGSYKLGDSTLSS 82
Query: 311 LIESYADSGDFESLERVLDRMKREQRVFA 397
+IE+YA+SGDF S+E+VL R++ E RV +
Sbjct: 83 MIENYANSGDFASVEQVLSRVRLENRVIS 111
>ref|XP_006468575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Citrus sinensis]
Length = 664
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +2
Query: 212 ENEEKSEPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRV 391
+ KSE P ++EIF S PKLGSY+ GD TF SLI+ YA+SGDF+SLE VL RM+RE+RV
Sbjct: 56 QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV 115
>ref|XP_006448599.1| hypothetical protein CICLE_v10014519mg [Citrus clementina]
gi|557551210|gb|ESR61839.1| hypothetical protein
CICLE_v10014519mg [Citrus clementina]
Length = 664
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = +2
Query: 212 ENEEKSEPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRV 391
+ KSE P ++E+F S PKLGSY+ GD TF SLI+ YA+SGDF+SLE VL RM+RE+RV
Sbjct: 56 QGNAKSEQPFSDEVFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLCRMRREKRV 115
>ref|XP_006363176.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like isoform X1 [Solanum tuberosum]
gi|565395083|ref|XP_006363177.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X2 [Solanum tuberosum]
Length = 717
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/63 (58%), Positives = 49/63 (77%)
Frame = +2
Query: 206 TCENEEKSEPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQ 385
+C+ E E P+++++F+ PKLGS+K GD TF SLIE YA+SGDF SLE+V DRMK E+
Sbjct: 111 SCKTEV--EVPISDKLFKEAPKLGSFKLGDSTFYSLIEKYANSGDFTSLEKVFDRMKCEK 168
Query: 386 RVF 394
RVF
Sbjct: 169 RVF 171
>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 74.3 bits (181), Expect = 2e-11
Identities = 34/57 (59%), Positives = 47/57 (82%)
Frame = +2
Query: 224 KSEPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRVF 394
+S+ P+ ++IF+S ++GSYK GD TF SLIE+YA+SGDF +L +V DRMKRE+RVF
Sbjct: 41 ESDAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVF 97
>gb|EYU22630.1| hypothetical protein MIMGU_mgv1a021685mg, partial [Mimulus
guttatus]
Length = 590
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/54 (62%), Positives = 45/54 (83%)
Frame = +2
Query: 233 PPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRVF 394
PP++++IF + PKLGSY++GD TF SLIE +A+SGDF +LE V RMKRE+RVF
Sbjct: 2 PPISDKIFVNSPKLGSYRRGDSTFYSLIEHHANSGDFRALEIVFQRMKRERRVF 55
>ref|XP_006404148.1| hypothetical protein EUTSA_v10010168mg [Eutrema salsugineum]
gi|557105267|gb|ESQ45601.1| hypothetical protein
EUTSA_v10010168mg [Eutrema salsugineum]
Length = 696
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Frame = +2
Query: 131 LYSSPCKFLQHRCCXXXXXXXXXXXTCENEEK-----SEPPLAEEIFRSGPKLGSYKQGD 295
L S+P K H C + E E++ S P++E++F S PK+GSYK GD
Sbjct: 56 LSSNPVKLSIHLLCFSSSVSVSPKPSMETEQQHTENPSAAPISEKMFESAPKMGSYKLGD 115
Query: 296 LTFNSLIESYADSGDFESLERVLDRMKREQRV 391
T +S+IE+YA+SGDF S+E++L R++ E R+
Sbjct: 116 STLSSMIENYANSGDFASVEKLLSRIRLENRM 147
>ref|XP_004232626.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Solanum lycopersicum]
Length = 717
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/63 (57%), Positives = 47/63 (74%)
Frame = +2
Query: 206 TCENEEKSEPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQ 385
+CE E E P+++++F+ PKLGS+K GD TF SLIE YA+S DF SLE+V RMK E+
Sbjct: 111 SCETEV--EVPISDKLFKEAPKLGSFKLGDSTFYSLIEKYANSEDFTSLEKVFGRMKCEK 168
Query: 386 RVF 394
RVF
Sbjct: 169 RVF 171
>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 653
Score = 72.0 bits (175), Expect = 8e-11
Identities = 37/63 (58%), Positives = 48/63 (76%), Gaps = 3/63 (4%)
Frame = +2
Query: 218 EEKSEP---PLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQR 388
E SEP P++++IF S PK+GS+K GD TF SLIE+YA S DF SLE+VL+RM+ E R
Sbjct: 44 ENGSEPESSPISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMRLENR 103
Query: 389 VFA 397
VF+
Sbjct: 104 VFS 106
>ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated
salt-inducible-like protein [Arabidopsis thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated
salt-inducible-like protein [Arabidopsis thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025
[Arabidopsis thaliana] gi|332658871|gb|AEE84271.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 660
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/58 (53%), Positives = 47/58 (81%)
Frame = +2
Query: 218 EEKSEPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRV 391
E E P++E++F+S PK+GS+K GD T +S+IESYA+SGDF+S+E++L R++ E RV
Sbjct: 52 ENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRV 109
>ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = +2
Query: 131 LYSSPCKFLQHRCCXXXXXXXXXXXTCENEEKSEPPLAEEIFRSGPKLGSYKQGDLTFNS 310
L S+P KF H + E E E P++E++F+S PK+GS+K GD T +S
Sbjct: 23 LSSNPVKFSIHLRFSASSVSVSPNPSMEVETPLEAPISEQMFKSAPKMGSFKLGDSTLSS 82
Query: 311 LIESYADSGDFESLERVLDRMKREQRV 391
+IE+YA+ GDF S+E++L R++ E RV
Sbjct: 83 MIENYANLGDFASVEKLLSRIRLENRV 109
>ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like isoform X1 [Glycine max]
gi|571476386|ref|XP_006586943.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X2 [Glycine max]
gi|571476388|ref|XP_006586944.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X3 [Glycine max]
gi|571476390|ref|XP_006586945.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X4 [Glycine max]
gi|571476393|ref|XP_006586946.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X5 [Glycine max]
gi|571476395|ref|XP_006586947.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X6 [Glycine max]
Length = 642
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +2
Query: 230 EPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRVF 394
+P + EIF+SG ++GSYK GDL+F SLIES+A S DF SLE VL +MKRE+RVF
Sbjct: 40 KPHPSSEIFKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVF 94
>ref|XP_007138861.1| hypothetical protein PHAVU_009G243700g [Phaseolus vulgaris]
gi|561011948|gb|ESW10855.1| hypothetical protein
PHAVU_009G243700g [Phaseolus vulgaris]
Length = 645
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +2
Query: 230 EPPLAEEIFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRVF 394
+P + EIF+SG K+GSYK GDL+F SLI+++A + DF SLE VL +MKRE+RVF
Sbjct: 43 QPHPSAEIFKSGTKMGSYKLGDLSFYSLIQNHASTLDFGSLEEVLQQMKRERRVF 97
>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/48 (66%), Positives = 40/48 (83%)
Frame = +2
Query: 251 IFRSGPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRVF 394
IF+S ++GSYK GD TF SLIE+YA+SGDF +L +V DRMKRE+RVF
Sbjct: 66 IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVF 113
>ref|XP_004487899.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like isoform X1 [Cicer arietinum]
Length = 649
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +2
Query: 221 EKSEPPLAEEIFRS-GPKLGSYKQGDLTFNSLIESYADSGDFESLERVLDRMKREQRVF 394
+ S PPL +IF+S + GSYK GDL+F SLIE+++ S DF SLE +L +MKRE RVF
Sbjct: 43 QPSSPPLPPQIFKSRSHEWGSYKLGDLSFYSLIENFSASSDFVSLEHLLHQMKRENRVF 101