BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00028041
         (294 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...    63   4e-08
emb|CBI35661.3| unnamed protein product [Vitis vinifera]               63   4e-08
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat...    62   6e-08

>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Vitis vinifera]
          Length = 1238

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 5/102 (4%)
 Frame = +3

Query: 3   EGEIDMDSEMIGEEKEGTCGELDSSGRNLKDEEALEKKIQSIQEVLQTVTVKDAEKSLHG 182
           EGEID+DSE   +++ G   +++    +LK+ E +E+ ++SIQE L++VTV +AEKS  G
Sbjct: 150 EGEIDLDSEPDVKDEGGVL-DVNEPEIDLKERELVER-VKSIQEDLESVTVIEAEKSFSG 207

Query: 183 VCSQLCACLDSMQ-----EMVSDNCLSAIDALTQQAFTGFRA 293
           VCS+L   L S+Q     ++V ++ +   DAL QQ     RA
Sbjct: 208 VCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRA 249


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 5/102 (4%)
 Frame = +3

Query: 3   EGEIDMDSEMIGEEKEGTCGELDSSGRNLKDEEALEKKIQSIQEVLQTVTVKDAEKSLHG 182
           EGEID+DSE   +++ G   +++    +LK+ E +E+ ++SIQE L++VTV +AEKS  G
Sbjct: 161 EGEIDLDSEPDVKDEGGVL-DVNEPEIDLKERELVER-VKSIQEDLESVTVIEAEKSFSG 218

Query: 183 VCSQLCACLDSMQ-----EMVSDNCLSAIDALTQQAFTGFRA 293
           VCS+L   L S+Q     ++V ++ +   DAL QQ     RA
Sbjct: 219 VCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRA 260


>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
           [Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
           polymerase II C-terminal domain phosphatase-like 3,
           putative [Theobroma cacao]
          Length = 1290

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 40/92 (43%), Positives = 57/92 (61%)
 Frame = +3

Query: 3   EGEIDMDSEMIGEEKEGTCGELDSSGRNLKDEEALEKKIQSIQEVLQTVTVKDAEKSLHG 182
           EGEID+DSE   +EK      L S   N+ + + LEK+   I+ VL+ VTV +AEKS  G
Sbjct: 186 EGEIDLDSEP--KEKV-----LSSEDGNVGNSDELEKRANLIRGVLEGVTVIEAEKSFEG 238

Query: 183 VCSQLCACLDSMQEMVSDNCLSAIDALTQQAF 278
           VCS+L   L+S++ ++ +  + A DAL Q AF
Sbjct: 239 VCSRLHNALESLRALILECSVPAKDALIQLAF 270