BLASTX nr result
ID: Cocculus22_contig00028002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00028002
(302 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi... 147 2e-33
ref|XP_007201591.1| hypothetical protein PRUPE_ppa020837mg [Prun... 140 1e-31
gb|EXB39277.1| hypothetical protein L484_024972 [Morus notabilis] 140 2e-31
ref|XP_002528283.1| pentatricopeptide repeat-containing protein,... 140 2e-31
ref|XP_002880355.1| pentatricopeptide repeat-containing protein ... 136 3e-30
ref|XP_006296137.1| hypothetical protein CARUB_v10025289mg [Caps... 135 5e-30
gb|EYU37931.1| hypothetical protein MIMGU_mgv1a003299mg [Mimulus... 135 6e-30
ref|XP_007041899.1| Pentatricopeptide repeat (PPR-like) superfam... 135 6e-30
emb|CBI37903.3| unnamed protein product [Vitis vinifera] 135 6e-30
ref|NP_179705.1| pentatricopeptide repeat-containing protein [Ar... 134 1e-29
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi... 134 2e-29
ref|XP_006404547.1| hypothetical protein EUTSA_v10000418mg [Eutr... 133 2e-29
ref|XP_004288346.1| PREDICTED: pentatricopeptide repeat-containi... 132 4e-29
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi... 132 4e-29
ref|XP_006361889.1| PREDICTED: pentatricopeptide repeat-containi... 129 4e-28
ref|XP_006840276.1| hypothetical protein AMTR_s00045p00048330 [A... 129 4e-28
ref|XP_004231259.1| PREDICTED: pentatricopeptide repeat-containi... 129 4e-28
ref|XP_007210320.1| hypothetical protein PRUPE_ppa002162mg [Prun... 125 8e-27
ref|XP_006580405.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 147 bits (370), Expect = 2e-33
Identities = 67/98 (68%), Positives = 82/98 (83%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
G KPD+IT VVILNACSHSGLV+ G+ F+S++ D+ IV +QEHYACL+DL GR+G E+
Sbjct: 421 GAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEE 480
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
V D LE MP+KPD RVWNALLG CR+HG+IELG+KAAE
Sbjct: 481 VMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAE 518
>ref|XP_007201591.1| hypothetical protein PRUPE_ppa020837mg [Prunus persica]
gi|462396991|gb|EMJ02790.1| hypothetical protein
PRUPE_ppa020837mg [Prunus persica]
Length = 610
Score = 140 bits (354), Expect = 1e-31
Identities = 64/99 (64%), Positives = 79/99 (79%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
GVKPDR T+VVILNACSHSGLV+ G+ FKS+ GDH IV +QEHYACL+DL GR+G ++
Sbjct: 419 GVKPDRTTVVVILNACSHSGLVQEGLSFFKSMIGDHGIVPDQEHYACLIDLLGRAGCFDE 478
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAEH 300
+ + L+ MP K +VWNALLG CR+HGN ELG+K AEH
Sbjct: 479 LINQLKNMPCKAGDQVWNALLGVCRIHGNTELGRKVAEH 517
>gb|EXB39277.1| hypothetical protein L484_024972 [Morus notabilis]
Length = 637
Score = 140 bits (352), Expect = 2e-31
Identities = 63/99 (63%), Positives = 80/99 (80%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
G+KPDRIT VV+LNACSHSGLV+ G++IFKS+ DH+IV +QEHYACL+DL GR+ +
Sbjct: 444 GLKPDRITFVVLLNACSHSGLVQEGLRIFKSMATDHVIVPDQEHYACLIDLLGRARCFNE 503
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAEH 300
+ + +E MP KP +VWNALLG CR+ GN+ELG KAAEH
Sbjct: 504 LMNEIEKMPSKPGYQVWNALLGVCRIQGNLELGSKAAEH 542
>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 602
Score = 140 bits (352), Expect = 2e-31
Identities = 59/99 (59%), Positives = 81/99 (81%)
Frame = +1
Query: 1 LGVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLE 180
LG+KPDRITL+V+LNACSHSGLV+ G+++++S+T H ++ NQEHYACL+DL GR+G +
Sbjct: 411 LGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFD 470
Query: 181 KVKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
+ + LE MP KP+ +WNALLG CR+HGNIE G++ AE
Sbjct: 471 TLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAE 509
>ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297326194|gb|EFH56614.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 599
Score = 136 bits (342), Expect = 3e-30
Identities = 62/97 (63%), Positives = 78/97 (80%)
Frame = +1
Query: 7 VKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEKV 186
V P+R TLVVILNACSHSGLVE G++ F+S+T H IV +QEHYACL+DL GR+G +++
Sbjct: 409 VHPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468
Query: 187 KDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
+E MPF+PD +WNA+LG CR+HGN ELGKKAAE
Sbjct: 469 MSKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAE 505
>ref|XP_006296137.1| hypothetical protein CARUB_v10025289mg [Capsella rubella]
gi|482564845|gb|EOA29035.1| hypothetical protein
CARUB_v10025289mg [Capsella rubella]
Length = 597
Score = 135 bits (341), Expect = 5e-30
Identities = 61/97 (62%), Positives = 80/97 (82%)
Frame = +1
Query: 7 VKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEKV 186
V+P+R TLVVILNACSHSGLVE G++ F+S+T H IV +QEHYACL+DL GR+G +++
Sbjct: 409 VQPNRTTLVVILNACSHSGLVEEGVRWFESMTIQHKIVPDQEHYACLIDLLGRAGCFKEL 468
Query: 187 KDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
+E MPF+PD ++WNA+LG R+HGN+ELGKKAAE
Sbjct: 469 MTKIEKMPFEPDEQIWNAILGVSRIHGNVELGKKAAE 505
>gb|EYU37931.1| hypothetical protein MIMGU_mgv1a003299mg [Mimulus guttatus]
Length = 594
Score = 135 bits (340), Expect = 6e-30
Identities = 60/99 (60%), Positives = 79/99 (79%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
GVKPD +T + +LNACSHSGLV+ GI +F+S+ D+ IV +Q HYACL+DL GRSG ++
Sbjct: 406 GVKPDDVTFLALLNACSHSGLVQEGIYLFESMNQDYSIVPDQGHYACLIDLLGRSGCFDE 465
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAEH 300
V + L+ MPF+PD RVWNAL+G C++HGNIELG+ AA H
Sbjct: 466 VMNQLKKMPFEPDERVWNALVGVCKIHGNIELGRIAARH 504
>ref|XP_007041899.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508705834|gb|EOX97730.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 610
Score = 135 bits (340), Expect = 6e-30
Identities = 61/98 (62%), Positives = 80/98 (81%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
GVKPDR T +VI+NACSHSGLV+ GI+ F+ ++ ++ I+ +Q+HYACL+DL GR+G ++
Sbjct: 417 GVKPDRTTFLVIVNACSHSGLVQEGIRYFECISSNYGIIPDQQHYACLIDLLGRAGCFDQ 476
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
+ + LE MP KPD RVWNALLG R+HGNIELGKKAAE
Sbjct: 477 LMNHLEKMPCKPDSRVWNALLGVSRIHGNIELGKKAAE 514
>emb|CBI37903.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 135 bits (340), Expect = 6e-30
Identities = 61/91 (67%), Positives = 75/91 (82%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
G KPD+IT VVILNACSHSGLV+ G+ F+S++ D+ IV +QEHYACL+DL GR+G E+
Sbjct: 421 GAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEE 480
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIE 276
V D LE MP+KPD RVWNALLG CR+HG+IE
Sbjct: 481 VMDQLEKMPYKPDDRVWNALLGVCRIHGHIE 511
>ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g21090 gi|4803934|gb|AAD29807.1| unknown protein
[Arabidopsis thaliana] gi|330252028|gb|AEC07122.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 597
Score = 134 bits (338), Expect = 1e-29
Identities = 61/97 (62%), Positives = 79/97 (81%)
Frame = +1
Query: 7 VKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEKV 186
V+P+R TLVVILNACSHSGLVE G++ F+S+T H IV +QEHYACL+DL GR+G +++
Sbjct: 409 VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468
Query: 187 KDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
+E MPF+PD +WNA+LG CR+HGN ELGKKAA+
Sbjct: 469 MRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAD 505
>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 134 bits (336), Expect = 2e-29
Identities = 60/98 (61%), Positives = 78/98 (79%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
G+KPDRIT +VIL+ACSHSGLV+ G++ FK++T DH + +QEHYACL+DL GR+G +
Sbjct: 424 GLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVE 483
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
+ + LE M KPD RVW+ALLG CR+H NIELG+K AE
Sbjct: 484 LVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAE 521
>ref|XP_006404547.1| hypothetical protein EUTSA_v10000418mg [Eutrema salsugineum]
gi|557105675|gb|ESQ46000.1| hypothetical protein
EUTSA_v10000418mg [Eutrema salsugineum]
Length = 596
Score = 133 bits (335), Expect = 2e-29
Identities = 59/99 (59%), Positives = 79/99 (79%)
Frame = +1
Query: 1 LGVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLE 180
L V P+R TL+VIL+ACSHSGLVE G++ F+S+T +H +V +QEHYACL+DL GR+G
Sbjct: 408 LRVHPNRTTLIVILSACSHSGLVEEGVRWFESMTVEHGVVPDQEHYACLIDLLGRAGCFN 467
Query: 181 KVKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
++ +E MPFKPD +WNA+LG R+HGN+ELGK+AAE
Sbjct: 468 ELMSRIEKMPFKPDEHIWNAILGVSRIHGNVELGKRAAE 506
>ref|XP_004288346.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Fragaria vesca subsp. vesca]
Length = 614
Score = 132 bits (333), Expect = 4e-29
Identities = 62/99 (62%), Positives = 76/99 (76%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
GVKP T VVILNACSHSGLV G ++FKS+T D+ IV N+EHYACL+DL GR+G ++
Sbjct: 423 GVKPVTTTFVVILNACSHSGLVLEGRRLFKSMTDDYGIVPNEEHYACLIDLLGRAGCFDE 482
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAEH 300
+ + LE MP K +VWNALLG CR+HGN ELG+K AEH
Sbjct: 483 LMNQLENMPCKAGDQVWNALLGVCRIHGNTELGRKVAEH 521
>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 132 bits (333), Expect = 4e-29
Identities = 59/98 (60%), Positives = 78/98 (79%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
G+KPDRIT +VIL+ACSHSGLV+ G++ FK++T DH + +QEHY+CL+DL GR+G +
Sbjct: 424 GLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVE 483
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
+ + LE M KPD RVW+ALLG CR+H NIELG+K AE
Sbjct: 484 LVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAE 521
>ref|XP_006361889.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Solanum tuberosum]
Length = 617
Score = 129 bits (324), Expect = 4e-28
Identities = 54/98 (55%), Positives = 77/98 (78%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
GVKP+RIT VV+LNACSHSGLV+ G+ F+++T + ++ +QEH+AC++DL GR+G +
Sbjct: 418 GVKPNRITFVVLLNACSHSGLVQEGLSFFETMTSSYDVLPDQEHFACIIDLLGRAGHFSE 477
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
V ++ MP +PD +WNALLG CR+HGN+ELG+ AAE
Sbjct: 478 VLAQIKKMPCEPDDHIWNALLGVCRIHGNVELGRMAAE 515
>ref|XP_006840276.1| hypothetical protein AMTR_s00045p00048330 [Amborella trichopoda]
gi|548841994|gb|ERN01951.1| hypothetical protein
AMTR_s00045p00048330 [Amborella trichopoda]
Length = 605
Score = 129 bits (324), Expect = 4e-28
Identities = 56/100 (56%), Positives = 77/100 (77%)
Frame = +1
Query: 1 LGVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLE 180
LG+KP+ ITLV +L+ACS GL++ G +F+++ DH IV +EHYAC+VDLFGR+G L+
Sbjct: 408 LGIKPNHITLVGVLSACSRIGLIDVGAHVFRNMERDHGIVPTREHYACMVDLFGRAGHLK 467
Query: 181 KVKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAEH 300
+ +D + MPF+PD VW LL ACR HGN+ELGK+AAE+
Sbjct: 468 EAEDFISRMPFEPDPIVWKTLLAACRTHGNLELGKRAAEN 507
>ref|XP_004231259.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Solanum lycopersicum]
Length = 602
Score = 129 bits (324), Expect = 4e-28
Identities = 54/98 (55%), Positives = 77/98 (78%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
GVKP+RIT VV+LNACSHSGLV+ G+ F+++T + ++ +QEH+AC++DL GR+G +
Sbjct: 418 GVKPNRITFVVLLNACSHSGLVQEGLSFFETMTSSYDVLPDQEHFACIIDLLGRAGHFSE 477
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
V ++ MP +PD +WNALLG CR+HGN+ELG+ AAE
Sbjct: 478 VLAQIKKMPCEPDDHIWNALLGVCRIHGNVELGRMAAE 515
>ref|XP_007210320.1| hypothetical protein PRUPE_ppa002162mg [Prunus persica]
gi|462406055|gb|EMJ11519.1| hypothetical protein
PRUPE_ppa002162mg [Prunus persica]
Length = 707
Score = 125 bits (313), Expect = 8e-27
Identities = 53/98 (54%), Positives = 76/98 (77%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
G+KPD +T+V +L+ACSH+GLV+ G + F S+ D+ I AN +HY C++DL GR+G+LE+
Sbjct: 431 GIKPDDVTMVGVLSACSHTGLVDRGTEYFYSMNQDYGITANSKHYTCMIDLLGRAGRLEE 490
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
++L+ MPF+PD W ALLGA R+HGN ELG+KAA+
Sbjct: 491 AQNLMRDMPFEPDAATWGALLGASRIHGNTELGEKAAQ 528
>ref|XP_006580405.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X2 [Glycine max]
Length = 718
Score = 124 bits (311), Expect = 1e-26
Identities = 54/98 (55%), Positives = 75/98 (76%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
GVKPD IT+V +L+ACSH+GL + G + F S+ D+ I N +HYAC++DL GR+G LE+
Sbjct: 442 GVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEE 501
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
++L+ MPF+PD W ALLGA R+HGN+ELG++AAE
Sbjct: 502 AQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAE 539
>ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Glycine max]
Length = 750
Score = 124 bits (311), Expect = 1e-26
Identities = 54/98 (55%), Positives = 75/98 (76%)
Frame = +1
Query: 4 GVKPDRITLVVILNACSHSGLVEAGIKIFKSLTGDHLIVANQEHYACLVDLFGRSGQLEK 183
GVKPD IT+V +L+ACSH+GL + G + F S+ D+ I N +HYAC++DL GR+G LE+
Sbjct: 474 GVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEE 533
Query: 184 VKDLLETMPFKPDGRVWNALLGACRVHGNIELGKKAAE 297
++L+ MPF+PD W ALLGA R+HGN+ELG++AAE
Sbjct: 534 AQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAE 571