BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00027495
         (567 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006658856.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
ref|XP_002461069.1| hypothetical protein SORBIDRAFT_02g040130 [S...    63   5e-08
gb|EMT26224.1| hypothetical protein F775_05781 [Aegilops tauschii]     62   8e-08
gb|AEP33769.1| organelle transcript processing 82, partial [Olim...    60   3e-07
tpg|DAA63730.1| TPA: hypothetical protein ZEAMMB73_596066 [Zea m...    60   5e-07
gb|AEP33763.1| organelle transcript processing 82, partial [Isat...    59   7e-07
gb|AEP33757.1| organelle transcript processing 82, partial [Aeth...    59   9e-07
ref|XP_002893429.1| pentatricopeptide repeat-containing protein ...    59   9e-07
emb|CBI27273.3| unnamed protein product [Vitis vinifera]               59   9e-07
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_002969969.1| hypothetical protein SELMODRAFT_92492 [Selag...    59   1e-06
ref|XP_004959846.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfam...    58   2e-06
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_003559925.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
gb|AEP33758.1| organelle transcript processing 82, partial [Barb...    58   2e-06
ref|XP_002309575.2| pentatricopeptide repeat-containing family p...    58   2e-06
ref|XP_002981439.1| hypothetical protein SELMODRAFT_114283 [Sela...    58   2e-06
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ...    57   3e-06

>ref|XP_006658856.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Oryza brachyantha]
          Length = 394

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGER--KMKKEVGS 394
           GNVKLGK+V   L  +G  HP+D+ILLS+ YA    WD++AR+R+ E ++  K KKE G 
Sbjct: 329 GNVKLGKMVQTQLDNMGNYHPSDAILLSNTYALESRWDEIARVRDSEEKKIVKDKKEPGC 388

Query: 393 SSIEM 379
           SSIE+
Sbjct: 389 SSIEV 393


>ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Vitis vinifera]
          Length = 597

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 36/64 (56%), Positives = 43/64 (67%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSS 388
           GNV LG+ V + L+ +  EHPTDSILLSS YA A    D  RM+E++ E KM KE G S 
Sbjct: 513 GNVDLGECVKRVLLEIFDEHPTDSILLSSTYAIAGRLPDYTRMQEIK-EEKMMKEAGCSV 571

Query: 387 IEMD 376
           IEMD
Sbjct: 572 IEMD 575


>ref|XP_002461069.1| hypothetical protein SORBIDRAFT_02g040130 [Sorghum bicolor]
           gi|241924446|gb|EER97590.1| hypothetical protein
           SORBIDRAFT_02g040130 [Sorghum bicolor]
          Length = 552

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 30/62 (48%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGER-KMKKEVGSS 391
           GNVKLG++V + L  +G  HP+D+ILLS+AYA    WD++A++R+ E ++  ++KE G S
Sbjct: 487 GNVKLGRMVQEQLDAIGHYHPSDAILLSNAYALEGRWDEIAQLRDSEAQKISVEKETGCS 546

Query: 390 SI 385
           SI
Sbjct: 547 SI 548


>gb|EMT26224.1| hypothetical protein F775_05781 [Aegilops tauschii]
          Length = 398

 Score = 62.4 bits (150), Expect = 8e-08
 Identities = 29/65 (44%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKM--KKEVGS 394
           GNV+LG+ V   L  +G  HP+D+ILLS+AYA  + WD++A+ R+ +G++ +  +KE G 
Sbjct: 329 GNVELGRTVQARLDAMGNYHPSDTILLSNAYALGDRWDEIAQARDSQGQKMVMDRKEAGC 388

Query: 393 SSIEM 379
           S+IE+
Sbjct: 389 SAIEV 393


>gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 30/64 (46%), Positives = 43/64 (67%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSS 388
           GNV+LG+   Q L+ +  E+P   +LLS+ YA AE W++VA+ R L  ++ MKK  G SS
Sbjct: 521 GNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSS 580

Query: 387 IEMD 376
           IE+D
Sbjct: 581 IEID 584


>tpg|DAA63730.1| TPA: hypothetical protein ZEAMMB73_596066 [Zea mays]
          Length = 552

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGER-KMKKEVGSS 391
           GN KLG++V   L  +G  HP+D+ILLS+ YA+   WD++A++R+ E ++  +KKE G S
Sbjct: 487 GNAKLGRMVQAQLDAIGHYHPSDAILLSNTYASEGRWDEIAQVRDSETQKISVKKEAGCS 546

Query: 390 SI 385
           S+
Sbjct: 547 SV 548


>gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 31/64 (48%), Positives = 43/64 (67%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSS 388
           GNV+L +   Q L+ +  E+P+  ILLS+ YA+A  W+DVAR+R L   + MKK  G SS
Sbjct: 482 GNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSS 541

Query: 387 IEMD 376
           IE+D
Sbjct: 542 IEVD 545


>gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 27/63 (42%), Positives = 44/63 (69%)
 Frame = -1

Query: 564 NVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSSI 385
           N++LG+++ Q L+ +  ++P   +LLS+ YA +  WDDVAR+R L  ++ +KK  G SSI
Sbjct: 497 NLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSI 556

Query: 384 EMD 376
           E+D
Sbjct: 557 EID 559


>ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339271|gb|EFH69688.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 790

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 31/64 (48%), Positives = 42/64 (65%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSS 388
           GN++LG I    L GL  EH    +LLS+ YAA   W++VAR+R+L  +R +KKEV  S 
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSW 659

Query: 387 IEMD 376
           IEM+
Sbjct: 660 IEME 663


>emb|CBI27273.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 31/64 (48%), Positives = 41/64 (64%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSS 388
           GNV+LG+   + L  L  E+P   +LLS+ YA A  WDDVAR+R    ++ MKK  G SS
Sbjct: 247 GNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSS 306

Query: 387 IEMD 376
           IE+D
Sbjct: 307 IEVD 310


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 31/64 (48%), Positives = 41/64 (64%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSS 388
           GNV+LG+   + L  L  E+P   +LLS+ YA A  WDDVAR+R    ++ MKK  G SS
Sbjct: 549 GNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSS 608

Query: 387 IEMD 376
           IE+D
Sbjct: 609 IEVD 612


>ref|XP_002969969.1| hypothetical protein SELMODRAFT_92492 [Selaginella moellendorffii]
           gi|300162480|gb|EFJ29093.1| hypothetical protein
           SELMODRAFT_92492 [Selaginella moellendorffii]
          Length = 331

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/64 (43%), Positives = 43/64 (67%)
 Frame = -1

Query: 564 NVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSSI 385
           NV+LG++  + L  +  E+    +LLS+ YAA + WDDVAR+R+L  ++ +KK  G SSI
Sbjct: 143 NVELGELCAERLFEMEPEYSAPYVLLSNIYAARDRWDDVARIRKLMADKGVKKPSGRSSI 202

Query: 384 EMDD 373
           E+ D
Sbjct: 203 EVGD 206


>ref|XP_004959846.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Setaria italica]
          Length = 553

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGER--KMKKEVGS 394
           GNVKLG++V   L  +G  HP+D I LS+ YA+   WD++AR+R+LE ++    +KE G 
Sbjct: 487 GNVKLGRMVQAQLDAMGHYHPSDVIQLSNTYASEGRWDEIARLRDLEAQKISVEQKEAGC 546

Query: 393 SSI 385
           +SI
Sbjct: 547 TSI 549


>ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508783730|gb|EOY30986.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 847

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 31/62 (50%), Positives = 41/62 (66%)
 Frame = -1

Query: 561 VKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSSIE 382
           V+LG+ V Q L+ L  ++P   +LLS+ YA A  WDDVAR+R L   + MKK  G SSIE
Sbjct: 607 VELGESVAQRLLELEPDNPGAYVLLSNIYAGAGRWDDVARIRTLLNNKGMKKVPGCSSIE 666

Query: 381 MD 376
           +D
Sbjct: 667 VD 668


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/65 (44%), Positives = 43/65 (66%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSS 388
           G V+LG++V + L  L  ++P   +LLS+ YA A  WDDVAR+R    +R MKK  G ++
Sbjct: 545 GRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTT 604

Query: 387 IEMDD 373
           IE+D+
Sbjct: 605 IEVDN 609


>ref|XP_003559925.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
           mitochondrial-like [Brachypodium distachyon]
          Length = 560

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/65 (43%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKM--KKEVGS 394
           GN++LG++V   L  +G  HP+D+ILLS+ YA+ + WD++A +R+  G++ +  KK+ G 
Sbjct: 495 GNIELGRMVQAQLDAMGDYHPSDTILLSNVYASEDRWDEIAHVRD-SGQKLVMYKKQAGC 553

Query: 393 SSIEM 379
           SSIE+
Sbjct: 554 SSIEV 558


>gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 42/64 (65%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSS 388
           GNV+LG+   Q L+ +  E+P   +LLS+ YA A  W++VA +R L  ++ MKK  G SS
Sbjct: 521 GNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSS 580

Query: 387 IEMD 376
           IE+D
Sbjct: 581 IEID 584


>ref|XP_002309575.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550337108|gb|EEE93098.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 693

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/64 (42%), Positives = 44/64 (68%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSS 388
           G+++LGK VG  L+ L +E+P + +++S+ YA A  W +  R+REL   +K+KKE G S 
Sbjct: 500 GDLELGKEVGGILLRLDSENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSW 559

Query: 387 IEMD 376
           +E+D
Sbjct: 560 VEID 563


>ref|XP_002981439.1| hypothetical protein SELMODRAFT_114283 [Selaginella moellendorffii]
           gi|300150979|gb|EFJ17627.1| hypothetical protein
           SELMODRAFT_114283 [Selaginella moellendorffii]
          Length = 283

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/64 (43%), Positives = 43/64 (67%)
 Frame = -1

Query: 564 NVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSSI 385
           NV+LG++  + L  +  E+    +LLS+ YAA + W+DVAR+R+L  +R +KK  G SSI
Sbjct: 95  NVELGELCAERLFEMEPEYSAPYVLLSNIYAARDRWNDVARIRKLMADRGVKKPSGRSSI 154

Query: 384 EMDD 373
           E+ D
Sbjct: 155 EVGD 158


>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338275|gb|EFH68692.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 29/64 (45%), Positives = 43/64 (67%)
 Frame = -1

Query: 567 GNVKLGKIVGQALVGLGAEHPTDSILLSSAYAAAESWDDVARMRELEGERKMKKEVGSSS 388
           GNV+LG+   Q L+ +  E+P   +LLS+ YA A  W++VA++R L  ++ MKK  G SS
Sbjct: 552 GNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSS 611

Query: 387 IEMD 376
           IE+D
Sbjct: 612 IEID 615