BLASTX nr result
ID: Cocculus22_contig00027464
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00027464
(282 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul... 83 3e-14
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 70 4e-10
emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera] 70 4e-10
emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera] 67 3e-09
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group] 67 3e-09
ref|XP_006397138.1| hypothetical protein EUTSA_v10029300mg [Eutr... 65 1e-08
gb|EMS60458.1| Retrovirus-related Pol polyprotein from transposo... 64 2e-08
ref|XP_006369212.1| hypothetical protein POPTR_0001s19040g, part... 63 4e-08
gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis] 63 4e-08
emb|CAN60569.1| hypothetical protein VITISV_000226 [Vitis vinifera] 63 4e-08
emb|CAN61091.1| hypothetical protein VITISV_043152 [Vitis vinifera] 63 5e-08
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 61 1e-07
gb|AAK29467.1| polyprotein-like [Solanum chilense] 61 1e-07
gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officin... 60 2e-07
ref|XP_006442418.1| hypothetical protein CICLE_v10023471mg, part... 59 7e-07
gb|EMT00957.1| hypothetical protein F775_43903 [Aegilops tauschii] 57 3e-06
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc... 56 4e-06
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc... 56 6e-06
>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
Length = 324
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/66 (54%), Positives = 49/66 (74%)
Frame = +1
Query: 85 KPTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLY 264
KP E+ EKDW +N+ AC TIR CL+++QKY V ETSA LW+ LEDK++ K +N+L
Sbjct: 23 KPKEVEEKDWSIINRLACGTIRSCLSREQKYVVKNETSAHKLWKALEDKFLKKSGQNKLL 82
Query: 265 LKKKLF 282
+KK+LF
Sbjct: 83 MKKRLF 88
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +1
Query: 85 KPTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSK 243
KP E+ EKDW +N+ AC TIR CL+++QKY V ETSA LW+ LEDK++ K
Sbjct: 23 KPKEVEEKDWSIINRLACGTIRSCLSREQKYAVKNETSAHKLWKALEDKFLKK 75
>emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]
Length = 127
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/66 (50%), Positives = 42/66 (63%)
Frame = +1
Query: 85 KPTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLY 264
+P M+ DW L + +TIRLCLA D Y VM E S +W KLE +YMSK N+LY
Sbjct: 44 QPEGMNNMDWKDLEVKVAATIRLCLADDVMYHVMDEESPTAIWLKLESQYMSKLLTNKLY 103
Query: 265 LKKKLF 282
LK+KL+
Sbjct: 104 LKQKLY 109
>emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera]
Length = 726
Score = 67.0 bits (162), Expect = 3e-09
Identities = 37/95 (38%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 DRRNNFGLRQCEVXXXXXXXXXXXXXXXKPTE-MSEKDWLKLNKQACSTIRLCLAKDQKY 177
D NFGL Q + K + M+ DW L + + I+LCL D Y
Sbjct: 5 DGSGNFGLWQRRIKDLLVQQGMVKVLYGKQLDGMNNMDWKDLXAKTAAMIKLCLVDDVMY 64
Query: 178 FVMRETSAKTLWQKLEDKYMSKCTENRLYLKKKLF 282
VM E S T+W KLE +YMSK N+LYLK+KL+
Sbjct: 65 HVMDEESLTTIWLKLESRYMSKXLTNKLYLKQKLY 99
>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
Length = 478
Score = 67.0 bits (162), Expect = 3e-09
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 DRRNNFGLRQCEVXXXXXXXXXXXXXXX-KPTEMSEKDWLKLNKQACSTIRLCLAKDQKY 177
D NFGL Q V KP +M + D ++ QA +TIR CL+ Y
Sbjct: 96 DGFGNFGLWQTRVKDLLAQQEVSKALKGVKPAKMEDDDCEEMQLQAAATIRRCLSDQIMY 155
Query: 178 FVMRETSAKTLWQKLEDKYMSKCTENRLYLKKKLF 282
VM ETS K +W+KLE ++MSK N+ YLK+KL+
Sbjct: 156 HVMEETSPKIIWEKLEAQFMSKTLTNKRYLKQKLY 190
>ref|XP_006397138.1| hypothetical protein EUTSA_v10029300mg [Eutrema salsugineum]
gi|557098155|gb|ESQ38591.1| hypothetical protein
EUTSA_v10029300mg [Eutrema salsugineum]
Length = 120
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/66 (45%), Positives = 42/66 (63%)
Frame = +1
Query: 85 KPTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLY 264
KP ++ + DW + QA STI+LCL+ D VM T+ +W KLE YMSK ++LY
Sbjct: 9 KPDKLKKDDWADMQDQAVSTIQLCLSDDITNQVMNITTCMEMWDKLEKMYMSKSLSSKLY 68
Query: 265 LKKKLF 282
LK+KL+
Sbjct: 69 LKQKLY 74
>gb|EMS60458.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Triticum urartu]
Length = 528
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +1
Query: 85 KPTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLY 264
KPT+M DW +L +A TIRL L+ Y VM E S K +W+KLE ++MSK ++Y
Sbjct: 355 KPTKMEADDWEELQLKAARTIRLFLSDQVIYHVMDENSPKKIWEKLESQFMSKTAMTKVY 414
Query: 265 LKKKL 279
LK+KL
Sbjct: 415 LKQKL 419
>ref|XP_006369212.1| hypothetical protein POPTR_0001s19040g, partial [Populus
trichocarpa] gi|550347651|gb|ERP65781.1| hypothetical
protein POPTR_0001s19040g, partial [Populus trichocarpa]
Length = 190
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = +1
Query: 109 DWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLYLKKKLF 282
DW +L + +TIRLCL D Y VM E S T+W KLE +Y+S N+LYLK KLF
Sbjct: 26 DWQELETRIVATIRLCLYDDVMYHVMNEESPVTVWAKLESRYISLSLSNKLYLKHKLF 83
>gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]
Length = 289
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = +1
Query: 85 KPTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLY 264
KP M+E+DW +L +A +TI+LCL + V+ E + LW KLED Y+ K NRL
Sbjct: 36 KPVTMTEEDWNQLEDRALTTIQLCLTNEVMQEVLTEKTTADLWSKLEDLYLMKSLTNRLL 95
Query: 265 LKKKLF 282
LK++L+
Sbjct: 96 LKQRLY 101
>emb|CAN60569.1| hypothetical protein VITISV_000226 [Vitis vinifera]
Length = 105
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/87 (42%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 13 NFGLRQCEVXXXXXXXXXXXXXXXK-PTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMR 189
NFGL Q V K P M + DW L + +TIRLCL D Y VM
Sbjct: 19 NFGLWQRRVKDLLVQQGMVKALYEKQPEGMDDMDWKDLEAKVEATIRLCLVDDVMYHVMD 78
Query: 190 ETSAKTLWQKLEDKYMSKCTENRLYLK 270
E S T+W KLE +YMS N+LYLK
Sbjct: 79 EESPTTIWLKLESRYMSMSLTNKLYLK 105
>emb|CAN61091.1| hypothetical protein VITISV_043152 [Vitis vinifera]
Length = 229
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +1
Query: 97 MSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLYLKKK 276
M++ DW L + TIRL L D Y VM E S T W KLE +YMSK N+LYLK+K
Sbjct: 1 MNDMDWKDLEAKVAKTIRLYLDDDVMYHVMDEESPTTNWLKLESRYMSKLLRNKLYLKQK 60
Query: 277 LF 282
L+
Sbjct: 61 LY 62
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/66 (43%), Positives = 43/66 (65%)
Frame = +1
Query: 85 KPTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLY 264
KP M +DW L+++A S IRL L+ D ++ E +A+ +W +LE YMSK N+LY
Sbjct: 43 KPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLY 102
Query: 265 LKKKLF 282
LKK+L+
Sbjct: 103 LKKQLY 108
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +1
Query: 85 KPTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLY 264
KP M +DW +L+++A S IRL L D ++ E SA +W KLE+ YMSK N+LY
Sbjct: 44 KPESMKLEDWEELDEKAASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKTLTNKLY 103
Query: 265 LKKKLF 282
LKK+L+
Sbjct: 104 LKKQLY 109
>gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officinalis]
Length = 1011
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1
Query: 85 KPTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLY 264
+P + W K+N+ C IR CL ++ KY V+ TS +W+ L +KY++K ENRL+
Sbjct: 824 RPPKYEVAIWEKMNRNTCGVIRSCLEQELKYDVIGVTSVMKMWEILNNKYLTKSVENRLH 883
Query: 265 LKKKLF 282
L ++LF
Sbjct: 884 LLRRLF 889
>ref|XP_006442418.1| hypothetical protein CICLE_v10023471mg, partial [Citrus clementina]
gi|557544680|gb|ESR55658.1| hypothetical protein
CICLE_v10023471mg, partial [Citrus clementina]
Length = 185
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +1
Query: 97 MSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLYLKKK 276
+S++DW +L+ +A S IRLCLAK+ V +AK LW+KLE Y +K NRLYLK++
Sbjct: 28 ISDEDWEELDDRAASAIRLCLAKNVLANVGNIPTAKELWEKLEKLYQTKSISNRLYLKEQ 87
>gb|EMT00957.1| hypothetical protein F775_43903 [Aegilops tauschii]
Length = 209
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +1
Query: 85 KPTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSK 243
KP +M +DW +L +A TIRLCL Y VM E S K +W+KLE ++MSK
Sbjct: 15 KPAKMEAEDWEELQLKAAGTIRLCLPDQIIYHVMDENSPKKIWEKLESQFMSK 67
>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 424
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +1
Query: 88 PTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLYL 267
P +M W ++ QA +TIRL L+ Y VM E ++K +W KL YMSK ++LYL
Sbjct: 45 PEKMDAGKWEEMKAQAAATIRLSLSDSVMYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYL 104
Query: 268 KKKLF 282
K++L+
Sbjct: 105 KQQLY 109
>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 425
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +1
Query: 88 PTEMSEKDWLKLNKQACSTIRLCLAKDQKYFVMRETSAKTLWQKLEDKYMSKCTENRLYL 267
P +M W ++ QA +TIRL L+ Y VM E + K +W KL YMSK ++LYL
Sbjct: 45 PEKMDAGKWEEMKAQAAATIRLSLSDSVMYPVMDEKTPKEIWDKLASLYMSKSLTSKLYL 104
Query: 268 KKKLF 282
K++L+
Sbjct: 105 KQQLY 109