BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00027459
         (361 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531596.1| pentatricopeptide repeat-containing protein,...    80   4e-13
gb|EXC18126.1| hypothetical protein L484_014527 [Morus notabilis]      79   7e-13
ref|XP_006361033.1| PREDICTED: pentatricopeptide repeat-containi...    75   1e-11
ref|XP_007198902.1| hypothetical protein PRUPE_ppa005316mg [Prun...    75   1e-11
ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containi...    75   1e-11
emb|CBI21839.3| unnamed protein product [Vitis vinifera]               75   1e-11
emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]    75   1e-11
ref|XP_002316903.2| hypothetical protein POPTR_0011s12150g [Popu...    73   5e-11
ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...    73   5e-11
ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containi...    73   5e-11
ref|XP_006481675.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_006429968.1| hypothetical protein CICLE_v10011545mg [Citr...    72   6e-11
ref|XP_006481674.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|XP_006827770.1| hypothetical protein AMTR_s00009p00264540 [A...    71   1e-10
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...    71   2e-10
ref|XP_006451898.1| hypothetical protein CICLE_v10007647mg [Citr...    70   2e-10
ref|XP_006429969.1| hypothetical protein CICLE_v10013712mg [Citr...    70   2e-10
ref|XP_006376504.1| pentatricopeptide repeat-containing family p...    70   4e-10
gb|EXB79633.1| hypothetical protein L484_011573 [Morus notabilis]      69   5e-10
ref|XP_006376509.1| hypothetical protein POPTR_0013s13650g [Popu...    69   5e-10

>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 300

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 33/58 (56%), Positives = 46/58 (79%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWVA 338
           LYRR+S VGDPK SIVP+LD+W+EEGK V +++ Q  I+ +R  +R+ HALEIS W++
Sbjct: 51  LYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHALEISMWMS 108


>gb|EXC18126.1| hypothetical protein L484_014527 [Morus notabilis]
          Length = 494

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 33/58 (56%), Positives = 47/58 (81%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWVA 338
           LYRR+S VG+P  S+VP+L++WV+EGKPV + E Q +I+ +R  +RF HALEISQW++
Sbjct: 59  LYRRISPVGNPNVSVVPILEQWVQEGKPVSQIELQRIIKELRIFKRFHHALEISQWMS 116


>ref|XP_006361033.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Solanum tuberosum]
          Length = 472

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 31/57 (54%), Positives = 46/57 (80%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWV 335
           LYRR+S +GDP  SIVPVLD+W++EGK V ++E Q +I+ ++  RR++HALE+S W+
Sbjct: 42  LYRRISPLGDPNESIVPVLDQWIKEGKHVVKKELQYMIKSLKDYRRYKHALEVSYWM 98


>ref|XP_007198902.1| hypothetical protein PRUPE_ppa005316mg [Prunus persica]
           gi|462394197|gb|EMJ00101.1| hypothetical protein
           PRUPE_ppa005316mg [Prunus persica]
          Length = 467

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 30/58 (51%), Positives = 44/58 (75%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWVA 338
           LY R+S  G+P+ SI PVLD+WVEEG+ V + E QS ++ +R  RR+ HAL+IS+W++
Sbjct: 39  LYHRISRAGNPRVSIAPVLDQWVEEGRDVNKSELQSFVKMLRKYRRYSHALQISEWMS 96


>ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 461

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 45/57 (78%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWV 335
           LY R+ AV DPKASI P+L++W+EEG+ V + + QSL++ M+  RRF HALEISQW+
Sbjct: 24  LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWM 80


>emb|CBI21839.3| unnamed protein product [Vitis vinifera]
          Length = 501

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 45/57 (78%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWV 335
           LY R+ AV DPKASI P+L++W+EEG+ V + + QSL++ M+  RRF HALEISQW+
Sbjct: 24  LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWM 80


>emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
          Length = 448

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/57 (57%), Positives = 45/57 (78%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWV 335
           LY R+ AV DPKASI P+L++W+EEG+ V + + QSL++ M+  RRF HALEISQW+
Sbjct: 24  LYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWM 80


>ref|XP_002316903.2| hypothetical protein POPTR_0011s12150g [Populus trichocarpa]
           gi|550328208|gb|EEE97515.2| hypothetical protein
           POPTR_0011s12150g [Populus trichocarpa]
          Length = 500

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 29/60 (48%), Positives = 47/60 (78%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWVAKD 344
           LY R+S +GDP+ S+ PVLD+WVEEGK V+  E +++++ +R  +RF+ ALE+SQW++ +
Sbjct: 36  LYSRISPLGDPRISLAPVLDQWVEEGKKVKDYELRTIVKGLRERKRFKQALEVSQWMSSN 95


>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 30/58 (51%), Positives = 47/58 (81%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWVA 338
           LYRR+S VGDP  S+ P+LD+WV EG+ V+++E + +I+ +R  +RF+HALEIS+W++
Sbjct: 31  LYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMS 88


>ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 227

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 30/58 (51%), Positives = 47/58 (81%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWVA 338
           LYRR+S VGDP  S+ P+LD+WV EG+ V+++E + +I+ +R  +RF+HALEIS+W++
Sbjct: 31  LYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMS 88


>ref|XP_006481675.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Citrus sinensis]
          Length = 485

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 30/62 (48%), Positives = 47/62 (75%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWVAKD 344
           LYR +S +GDP  S+VP+LD+WVEEG+P+  E+ + +I++ R  +RF HAL+IS W+ K 
Sbjct: 53  LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112

Query: 345 NS 350
           ++
Sbjct: 113 SN 114


>ref|XP_006429968.1| hypothetical protein CICLE_v10011545mg [Citrus clementina]
           gi|557532025|gb|ESR43208.1| hypothetical protein
           CICLE_v10011545mg [Citrus clementina]
          Length = 499

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 30/62 (48%), Positives = 47/62 (75%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWVAKD 344
           LYR +S +GDP  S+VP+LD+WVEEG+P+  E+ + +I++ R  +RF HAL+IS W+ K 
Sbjct: 53  LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKK 112

Query: 345 NS 350
           ++
Sbjct: 113 SN 114


>ref|XP_006481674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Citrus sinensis]
          Length = 518

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/57 (52%), Positives = 44/57 (77%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWV 335
           L+RR+S +G+P  SIVP+L++WVEEG PV +++ Q  I+++R   RF HALEIS W+
Sbjct: 48  LFRRISPMGNPNVSIVPLLNQWVEEGHPVDKQQLQRFIKKLRFFSRFTHALEISMWM 104


>ref|XP_006827770.1| hypothetical protein AMTR_s00009p00264540 [Amborella trichopoda]
           gi|548832390|gb|ERM95186.1| hypothetical protein
           AMTR_s00009p00264540 [Amborella trichopoda]
          Length = 503

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 27/58 (46%), Positives = 46/58 (79%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWVA 338
           +++R+S +GDP  S+VP+L++WV EG+ V + + QSL++ MR  RR++HALEI +W++
Sbjct: 36  IFKRISPLGDPGTSVVPLLEEWVREGRKVHKSDLQSLVKEMRRYRRYKHALEICRWMS 93


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 28/57 (49%), Positives = 42/57 (73%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWV 335
           LY R+S  G P  SIVP+L+KW+EEG  V++ E Q  ++++R  RRF HAL++S+W+
Sbjct: 41  LYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHALQVSEWM 97


>ref|XP_006451898.1| hypothetical protein CICLE_v10007647mg [Citrus clementina]
           gi|557555124|gb|ESR65138.1| hypothetical protein
           CICLE_v10007647mg [Citrus clementina]
          Length = 681

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 28/58 (48%), Positives = 45/58 (77%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWVA 338
           LY R+S +GDP  S+ PVLD+WV EG+ +   E Q +I+++RS +RF+HAL++S+W++
Sbjct: 39  LYSRISPLGDPDVSLTPVLDQWVLEGQKISELELQRIIRQLRSRKRFKHALQVSEWMS 96


>ref|XP_006429969.1| hypothetical protein CICLE_v10013712mg [Citrus clementina]
           gi|557532026|gb|ESR43209.1| hypothetical protein
           CICLE_v10013712mg [Citrus clementina]
          Length = 468

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/57 (52%), Positives = 43/57 (75%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWV 335
           L+RR+S +G+P  SIVP+L++WVEEG PV +++ Q  I+ +R   RF HALEIS W+
Sbjct: 48  LFRRISPMGNPNVSIVPLLNQWVEEGHPVDKQQLQRFIKELRFFSRFTHALEISMWM 104


>ref|XP_006376504.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550325780|gb|ERP54301.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 441

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 27/62 (43%), Positives = 45/62 (72%)
 Frame = +3

Query: 174 RVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWVAKDNSL 353
           R+S  G+PK SI+PV+++W++EG  +++ + Q+ I+  R  RRF HAL+ISQW++ +   
Sbjct: 9   RISRAGNPKVSIIPVIEQWLKEGNSIKQSDLQNFIKLFRRHRRFSHALQISQWMSDERGS 68

Query: 354 EQ 359
           EQ
Sbjct: 69  EQ 70


>gb|EXB79633.1| hypothetical protein L484_011573 [Morus notabilis]
          Length = 515

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 29/63 (46%), Positives = 44/63 (69%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWVAKD 344
           L++R+  + DPKAS++PVL +WV+EG+P+ + E   L++ M+  RRF HALEIS W+   
Sbjct: 51  LFQRIQVIRDPKASVLPVLRQWVDEGRPIGKTELGWLVRTMKDFRRFNHALEISLWMTDS 110

Query: 345 NSL 353
             L
Sbjct: 111 RFL 113


>ref|XP_006376509.1| hypothetical protein POPTR_0013s13650g [Populus trichocarpa]
           gi|550325785|gb|ERP54306.1| hypothetical protein
           POPTR_0013s13650g [Populus trichocarpa]
          Length = 482

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 29/57 (50%), Positives = 43/57 (75%)
 Frame = +3

Query: 165 LYRRVSAVGDPKASIVPVLDKWVEEGKPVRREEFQSLIQRMRSSRRFQHALEISQWV 335
           L RR+ A+ DP+ SIVPVLD+WV+EG  V +    SL++ M+  +RF+HALE+S+W+
Sbjct: 49  LCRRIEAIRDPRVSIVPVLDQWVKEGNTVDKHHLVSLVRLMKDYKRFKHALEVSEWM 105