BLASTX nr result
ID: Cocculus22_contig00027282
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00027282
(315 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 143 3e-32
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 143 3e-32
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 143 3e-32
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar... 138 9e-31
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar... 138 9e-31
ref|XP_004515136.1| PREDICTED: genome polyprotein-like [Cicer ar... 131 8e-29
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar... 130 1e-28
ref|XP_004509641.1| PREDICTED: genome polyprotein-like [Cicer ar... 130 2e-28
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar... 127 1e-27
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 127 1e-27
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 127 1e-27
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]... 127 1e-27
ref|XP_006419165.1| hypothetical protein EUTSA_v100029341mg, par... 125 8e-27
ref|XP_004488413.1| PREDICTED: genome polyprotein-like [Cicer ar... 124 1e-26
ref|XP_004514313.1| PREDICTED: genome polyprotein-like [Cicer ar... 124 1e-26
ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer ar... 123 2e-26
gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein... 121 1e-25
ref|XP_004512786.1| PREDICTED: genome polyprotein-like [Cicer ar... 120 2e-25
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part... 116 4e-24
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part... 114 2e-23
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 143 bits (360), Expect = 3e-32
Identities = 66/104 (63%), Positives = 79/104 (75%)
Frame = -2
Query: 314 AQIECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLP 135
AQ EC +LL Q L+EPT S WACQ FYV KHSE+ RGKKRLVIDY+PLN+FL+D+KFPLP
Sbjct: 1244 AQQECSQLLAQGLIEPTTSQWACQAFYVEKHSEIVRGKKRLVIDYQPLNMFLQDDKFPLP 1303
Query: 134 KIQTQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
+ Q+ L A FSKFDL SGFW LG+ +R KT FC+P+A
Sbjct: 1304 RRQSMFTFLKNAQIFSKFDLKSGFWQLGIEPSERYKTAFCIPNA 1347
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 143 bits (360), Expect = 3e-32
Identities = 66/104 (63%), Positives = 79/104 (75%)
Frame = -2
Query: 314 AQIECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLP 135
AQ EC +LL Q L+EPT S WACQ FYV KHSE+ RGKKRLVIDY+PLN+FL+D+KFPLP
Sbjct: 1342 AQQECSQLLAQGLIEPTTSQWACQAFYVEKHSEIVRGKKRLVIDYQPLNMFLQDDKFPLP 1401
Query: 134 KIQTQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
+ Q+ L A FSKFDL SGFW LG+ +R KT FC+P+A
Sbjct: 1402 RRQSMFTFLKNAQIFSKFDLKSGFWQLGIEPSERYKTAFCIPNA 1445
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 143 bits (360), Expect = 3e-32
Identities = 66/104 (63%), Positives = 79/104 (75%)
Frame = -2
Query: 314 AQIECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLP 135
AQ EC +LL Q L+EPT S WACQ FYV KHSE+ RGKKRLVIDY+PLN+FL+D+KFPLP
Sbjct: 1355 AQQECSQLLAQGLIEPTTSQWACQAFYVEKHSEIVRGKKRLVIDYQPLNMFLQDDKFPLP 1414
Query: 134 KIQTQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
+ Q+ L A FSKFDL SGFW LG+ +R KT FC+P+A
Sbjct: 1415 RRQSMFTFLKNAQIFSKFDLKSGFWQLGIEPSERYKTAFCIPNA 1458
>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1951
Score = 138 bits (347), Expect = 9e-31
Identities = 64/104 (61%), Positives = 80/104 (76%)
Frame = -2
Query: 314 AQIECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLP 135
A+ EC++LLQQ L+EPT S+WACQ FYV K SE RGKKRLVIDYKPLN FLKD+KFP+P
Sbjct: 1356 AREECNQLLQQGLIEPTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHFLKDDKFPIP 1415
Query: 134 KIQTQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
K + + L A +S FD+ SGFW LG++ +DR KT FC+P+A
Sbjct: 1416 KTSSLNIFLKDAQVYSNFDMKSGFWQLGINPNDRYKTAFCIPNA 1459
>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 894
Score = 138 bits (347), Expect = 9e-31
Identities = 65/104 (62%), Positives = 79/104 (75%)
Frame = -2
Query: 314 AQIECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLP 135
A+ EC++LLQQ L+EPT S+WACQ FYV K SE RGKKRLVIDYKPLN FLKD+KFP+P
Sbjct: 566 AREECNQLLQQGLIEPTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHFLKDDKFPIP 625
Query: 134 KIQTQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
K + L A +SKFD+ SGFW LG+ +DR KT FC+P+A
Sbjct: 626 KTSSLNTFLKDAQVYSKFDMKSGFWQLGIDPNDRYKTAFCIPNA 669
>ref|XP_004515136.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 163
Score = 131 bits (330), Expect = 8e-29
Identities = 63/104 (60%), Positives = 77/104 (74%)
Frame = -2
Query: 314 AQIECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLP 135
A+ EC++LLQQ L+EPT S+WACQ FYV K SE RGKKRLVIDYKPLN FLKD+KFP+
Sbjct: 9 AREECNQLLQQGLIEPTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHFLKDDKFPIL 68
Query: 134 KIQTQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
K + + L A +SKFD+ SGFW LG+ D KT FC+P+A
Sbjct: 69 KTSSLNIFLKDAQIYSKFDMKSGFWKLGIDPKDCYKTAFCIPNA 112
>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 803
Score = 130 bits (328), Expect = 1e-28
Identities = 61/101 (60%), Positives = 75/101 (74%)
Frame = -2
Query: 305 ECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLPKIQ 126
EC++LLQQ L+E T +WACQ FYV K SE RGKKRL IDYKPLN FLKD+KFP+PK
Sbjct: 435 ECNQLLQQGLIELTKFEWACQAFYVEKRSEKIRGKKRLAIDYKPLNHFLKDDKFPIPKTS 494
Query: 125 TQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
+ + L A +SKFD+ SGFW LG+ +DR KT FC+P+A
Sbjct: 495 SLNIFLKDAQIYSKFDMKSGFWQLGIDPNDRYKTAFCIPNA 535
>ref|XP_004509641.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 293
Score = 130 bits (326), Expect = 2e-28
Identities = 62/104 (59%), Positives = 77/104 (74%)
Frame = -2
Query: 314 AQIECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLP 135
A+ EC++LLQQ L+E T S+WACQ YV K SE RG+KRLVIDYKPLN FLKD+KFP+P
Sbjct: 174 AREECNQLLQQGLIESTKSEWACQAIYVEKRSEKIRGRKRLVIDYKPLNHFLKDDKFPIP 233
Query: 134 KIQTQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
K + + L A +SKF + SGFW LG+ DR KTVFC+P+A
Sbjct: 234 KTSSLNIFLKDAQIYSKFYMKSGFWQLGIDPKDRYKTVFCIPNA 277
>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1645
Score = 127 bits (320), Expect = 1e-27
Identities = 60/104 (57%), Positives = 75/104 (72%)
Frame = -2
Query: 314 AQIECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLP 135
A+ EC++LLQQ L+EPT +WACQ FYV K S+ R KKR+VIDYKPLN FLKD KFP+P
Sbjct: 1301 AREECNQLLQQGLIEPTKFEWACQAFYVEKRSKKIRVKKRMVIDYKPLNHFLKDGKFPIP 1360
Query: 134 KIQTQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
K + + L A +SKFD+ SGFW LG+ DR K FC+P+A
Sbjct: 1361 KTSSLNIFLKDAQIYSKFDIKSGFWQLGIDPKDRYKMAFCIPNA 1404
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 127 bits (320), Expect = 1e-27
Identities = 61/99 (61%), Positives = 74/99 (74%)
Frame = -2
Query: 305 ECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLPKIQ 126
ECDEL Q +L+EP+ S WAC+ FYVNK SE RGK RLVI+Y+PLN FL+D+KFP+P
Sbjct: 1405 ECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKL 1464
Query: 125 TQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLP 9
T L A FSKFDL SGFW LG+H ++RPKT FC+P
Sbjct: 1465 TLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIP 1503
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 127 bits (320), Expect = 1e-27
Identities = 61/99 (61%), Positives = 74/99 (74%)
Frame = -2
Query: 305 ECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLPKIQ 126
ECDEL Q +L+EP+ S WAC+ FYVNK SE RGK RLVI+Y+PLN FL+D+KFP+P
Sbjct: 1405 ECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKL 1464
Query: 125 TQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLP 9
T L A FSKFDL SGFW LG+H ++RPKT FC+P
Sbjct: 1465 TLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIP 1503
>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
polyprotein; Contains: RecName: Full=Movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
Short=CP; Contains: RecName: Full=Aspartic protease;
Short=PR; Contains: RecName: Full=Reverse transcriptase;
Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
[petunia vein clearing virus]
Length = 2179
Score = 127 bits (320), Expect = 1e-27
Identities = 61/99 (61%), Positives = 74/99 (74%)
Frame = -2
Query: 305 ECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLPKIQ 126
ECDEL Q +L+EP+ S WAC+ FYVNK SE RGK RLVI+Y+PLN FL+D+KFP+P
Sbjct: 1404 ECDELQQFDLIEPSDSQWACEAFYVNKRSEQVRGKLRLVINYQPLNHFLQDDKFPIPNKL 1463
Query: 125 TQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLP 9
T L A FSKFDL SGFW LG+H ++RPKT FC+P
Sbjct: 1464 TLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPKTGFCIP 1502
>ref|XP_006419165.1| hypothetical protein EUTSA_v100029341mg, partial [Eutrema
salsugineum] gi|557097093|gb|ESQ37601.1| hypothetical
protein EUTSA_v100029341mg, partial [Eutrema
salsugineum]
Length = 735
Score = 125 bits (313), Expect = 8e-27
Identities = 61/103 (59%), Positives = 74/103 (71%)
Frame = -2
Query: 314 AQIECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLP 135
A ECD+L++Q ++ T S WAC+ FYVN +E RGK RLVIDYKPLN +L+D KFPLP
Sbjct: 442 ANEECDQLVKQGVVSSTNSPWACKAFYVNNRAEQARGKLRLVIDYKPLNQYLQDVKFPLP 501
Query: 134 KIQTQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPH 6
+ + L GA FSKFDL SGFW LGVH D+R KT FCLP+
Sbjct: 502 IRKALLQHLQGATIFSKFDLKSGFWQLGVHPDERYKTAFCLPN 544
>ref|XP_004488413.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 221
Score = 124 bits (312), Expect = 1e-26
Identities = 60/101 (59%), Positives = 74/101 (73%)
Frame = -2
Query: 305 ECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLPKIQ 126
EC++LL+Q L+EPT S+WACQ FYV K SE RGKKRLVI YKPLN FLKD+KF + K
Sbjct: 106 ECNQLLKQGLVEPTKSEWACQAFYVEKRSEKMRGKKRLVIHYKPLNHFLKDDKFLILKTS 165
Query: 125 TQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
+ + L A +SKFD++SGFW LGV DR KT C+P+A
Sbjct: 166 SLNIFLKDAQIYSKFDMNSGFWQLGVDPKDRYKTAICIPNA 206
>ref|XP_004514313.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 211
Score = 124 bits (311), Expect = 1e-26
Identities = 61/104 (58%), Positives = 75/104 (72%)
Frame = -2
Query: 314 AQIECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLP 135
A+ EC++LL+Q L+E T S+WACQ FYV K SE RGKKRLVIDYKPLN FLKD+KFP+
Sbjct: 85 AREECNQLLKQGLIELTKSEWACQAFYVEKRSEKIRGKKRLVIDYKPLNHFLKDDKFPIL 144
Query: 134 KIQTQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
K + + L A+ +SKFD GFW L V DR KT FC+P+A
Sbjct: 145 KTSSLNIFLKDAHIYSKFDTKFGFWQLRVDPKDRYKTAFCIPNA 188
>ref|XP_004511013.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 335
Score = 123 bits (309), Expect = 2e-26
Identities = 59/101 (58%), Positives = 73/101 (72%)
Frame = -2
Query: 305 ECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLPKIQ 126
EC++LL+Q L+EPT S+WACQ FYV K SE R KKRLVIDYKPLN FLKD+KF + K
Sbjct: 177 ECNQLLKQGLIEPTKSEWACQAFYVEKRSEKVRRKKRLVIDYKPLNHFLKDDKFLISKTS 236
Query: 125 TQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
+ + L A +SKFD+ SGFW LG+ D KT FC+P+A
Sbjct: 237 SLNIFLKDAQIYSKFDMKSGFWQLGIDPKDCYKTAFCIPNA 277
>gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein clearing virus]
Length = 758
Score = 121 bits (303), Expect = 1e-25
Identities = 57/101 (56%), Positives = 72/101 (71%)
Frame = -2
Query: 314 AQIECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLP 135
A+ E +L + L+E T S WAC+ FYVNK +E RGK RLVI+Y+PLN FL D+KFPLP
Sbjct: 9 AKEELQQLTNEGLIENTTSPWACEAFYVNKRAEQVRGKLRLVINYQPLNNFLADDKFPLP 68
Query: 134 KIQTQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCL 12
+ T L A+ FSKFDL +GFW LG+H D+RPKT FC+
Sbjct: 69 RRNTLFSQLSNAHVFSKFDLKAGFWQLGIHPDERPKTGFCI 109
>ref|XP_004512786.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 415
Score = 120 bits (301), Expect = 2e-25
Identities = 58/101 (57%), Positives = 72/101 (71%)
Frame = -2
Query: 305 ECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLPKIQ 126
EC++LL+Q+L+EPT +W Q FYV K SE RGK LVIDYKPLN FLKD+KFP+ K
Sbjct: 245 ECNQLLKQDLIEPTKYEWVGQAFYVEKRSEKIRGKNMLVIDYKPLNHFLKDDKFPILKTS 304
Query: 125 TQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLPHA 3
+ + L A +SKFD+ SGFW GV DR KTVFC+P+A
Sbjct: 305 SLNIFLKDAQIYSKFDMKSGFWQFGVDPKDRYKTVFCIPNA 345
>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
gi|557090298|gb|ESQ31006.1| hypothetical protein
EUTSA_v10012231mg, partial [Eutrema salsugineum]
Length = 1904
Score = 116 bits (290), Expect = 4e-24
Identities = 56/99 (56%), Positives = 70/99 (70%)
Frame = -2
Query: 305 ECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLPKIQ 126
E + L ++ L+E T S WAC+ FYVNK +E RGK RLVI+Y+PLN FL D+KFPLPK +
Sbjct: 1251 EVNLLQKEGLIEKTTSPWACEAFYVNKRAEQVRGKLRLVINYQPLNHFLADDKFPLPKRE 1310
Query: 125 TQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLP 9
L A FSKFDL +GFW LG+ +DRPKT FC+P
Sbjct: 1311 VLFQRLPQAQVFSKFDLKAGFWQLGIKPEDRPKTSFCIP 1349
>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
gi|557110784|gb|ESQ51075.1| hypothetical protein
EUTSA_v10023188mg, partial [Eutrema salsugineum]
Length = 1101
Score = 114 bits (284), Expect = 2e-23
Identities = 55/99 (55%), Positives = 70/99 (70%)
Frame = -2
Query: 305 ECDELLQQNLLEPTLSDWACQTFYVNKHSELKRGKKRLVIDYKPLNVFLKDNKFPLPKIQ 126
E + L ++ L++ T S WAC+ FYVNK +E RGK RLVI+Y+PLN FL D+KFPLPK +
Sbjct: 848 EVNLLQKEGLIKTTTSPWACEAFYVNKKAEQVRGKLRLVINYQPLNHFLADDKFPLPKRE 907
Query: 125 TQVVLLGGAYYFSKFDLSSGFW*LGVHLDDRPKTVFCLP 9
L A FSKFDL +GFW LG+ +DRPKT FC+P
Sbjct: 908 VLFQRLPQAQVFSKFDLKAGFWQLGIKPEDRPKTGFCIP 946