BLASTX nr result
ID: Cocculus22_contig00027225
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00027225
(629 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003622194.1| Cellular nucleic acid-binding protein-like p... 51 1e-07
ref|XP_003605727.1| Cellular nucleic acid-binding protein [Medic... 50 4e-07
ref|XP_007049818.1| Gag protease polyprotein [Theobroma cacao] g... 52 1e-06
gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo] 59 2e-06
ref|XP_003635931.1| Cellular nucleic acid-binding protein [Medic... 48 2e-06
ref|XP_006605141.1| PREDICTED: uncharacterized protein LOC102662... 43 3e-06
gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo] 57 3e-06
ref|XP_006597876.1| PREDICTED: uncharacterized protein LOC102664... 43 5e-06
ref|XP_006597877.1| PREDICTED: uncharacterized protein LOC102664... 43 5e-06
ref|XP_006597878.1| PREDICTED: uncharacterized protein LOC102664... 43 5e-06
ref|XP_006597879.1| PREDICTED: uncharacterized protein LOC102664... 43 5e-06
ref|XP_006598618.1| PREDICTED: uncharacterized protein LOC102669... 42 6e-06
ref|XP_006584294.1| PREDICTED: uncharacterized protein LOC102668... 42 7e-06
ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355... 48 8e-06
ref|XP_007099662.1| Gag protease polyprotein-like protein [Theob... 51 8e-06
>ref|XP_003622194.1| Cellular nucleic acid-binding protein-like protein, partial
[Medicago truncatula] gi|355497209|gb|AES78412.1|
Cellular nucleic acid-binding protein-like protein,
partial [Medicago truncatula]
Length = 509
Score = 50.8 bits (120), Expect(2) = 1e-07
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +1
Query: 466 WWLSVLNVHKE---VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQY 621
WW+S+L V K+ V TW+ F+ F ++YF R KK EF LKQGNMSV +Y
Sbjct: 111 WWISLLPVLKQDGAVVTWAVFRREFLDRYFLEDVRGKKEIEFLELKQGNMSVTEY 165
Score = 31.6 bits (70), Expect(2) = 1e-07
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 363 RYKFERIEDWISEIEQIARTLKLDEESQVLSVTHMVA 473
RY + + W+ EIE++ R ++ E +V THM+A
Sbjct: 69 RYDLDGAQTWLKEIERVFRVMQCTEVQKVRFGTHMLA 105
>ref|XP_003605727.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355506782|gb|AES87924.1| Cellular nucleic
acid-binding protein [Medicago truncatula]
Length = 458
Score = 50.1 bits (118), Expect(2) = 4e-07
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +1
Query: 466 WWLSVLNVHKE---VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQY 621
WW+S+L V ++ V TW+ F+ F +YFP R KK EF LKQG+MSV +Y
Sbjct: 92 WWVSLLPVLEQDGAVVTWAVFRREFLNRYFPEDVRGKKEIEFLELKQGDMSVTEY 146
Score = 30.4 bits (67), Expect(2) = 4e-07
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 363 RYKFERIEDWISEIEQIARTLKLDEESQVLSVTHMVA 473
RY + + W+ E+E+I R ++ E +V THM+A
Sbjct: 50 RYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLA 86
>ref|XP_007049818.1| Gag protease polyprotein [Theobroma cacao]
gi|508702079|gb|EOX93975.1| Gag protease polyprotein
[Theobroma cacao]
Length = 548
Score = 52.0 bits (123), Expect(2) = 1e-06
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +1
Query: 466 WWLSVLNVHKEVKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYE 624
WW SV + +TWS F FD +YF + +K EF +LKQGN++V +YE
Sbjct: 169 WWNSVKSRSATAQTWSDFLREFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYE 221
Score = 26.6 bits (57), Expect(2) = 1e-06
Identities = 7/31 (22%), Positives = 21/31 (67%)
Frame = +3
Query: 378 RIEDWISEIEQIARTLKLDEESQVLSVTHMV 470
R +DWI+++ + ++LD++ +++ T ++
Sbjct: 132 RAKDWINQVSETLSDMRLDDDMKLMVATRLL 162
>gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo]
Length = 429
Score = 58.5 bits (140), Expect = 2e-06
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 14/174 (8%)
Frame = +1
Query: 145 APTPVPNVDPAPANIDDHAPTPVQAPIRVPNPEHEIVANPAPNQVHTMEDDISLRQSKLM 324
+PTP P PAPA P P AP VP + P+Q+ ++K +
Sbjct: 20 SPTPAPAPAPAPA------PVPAPAPAPVP-----VAPQFVPDQLSA--------EAKHL 60
Query: 325 KEFMKYHLSKLNGGTNLKELRTGFQR*SKLRGL*NLMRSLKYSQLPI-----------WW 471
++F KY+ + +G +L++ S L + M+ + ++ WW
Sbjct: 61 RDFRKYNPTTFDG--SLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWW 118
Query: 472 LS---VLNVHKEVKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYE 624
+ +L TW +FKE F K+F RD K +EF NL+QG+M+V QY+
Sbjct: 119 ETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYD 172
>ref|XP_003635931.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355501866|gb|AES83069.1| Cellular nucleic
acid-binding protein [Medicago truncatula]
Length = 558
Score = 48.1 bits (113), Expect(2) = 2e-06
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +1
Query: 466 WWLSVLNVHKE---VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQY 621
WW+S+L + ++ TW+ F+ F +YFP R KK EF LKQG+MSV +Y
Sbjct: 135 WWVSLLPILEQDGVAVTWAVFRREFLNRYFPEDVRGKKEIEFLELKQGDMSVTEY 189
Score = 29.6 bits (65), Expect(2) = 2e-06
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 363 RYKFERIEDWISEIEQIARTLKLDEESQVLSVTHMVALSVE 485
RY + ++W+ E+E++ R ++ E +V HM+A E
Sbjct: 93 RYDPDGAQNWLKEVERVFRVMQCSEVQKVRFGAHMLAEEAE 133
>ref|XP_006605141.1| PREDICTED: uncharacterized protein LOC102662774 [Glycine max]
Length = 307
Score = 42.7 bits (99), Expect(2) = 3e-06
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +1
Query: 466 WWLSVLNVHKE-----VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQY 621
WW + H E V W F++ F EKYFP +++K EF LKQG+M+V +Y
Sbjct: 93 WWENT-RPHLEGAGGAVVPWGTFRQTFLEKYFPEDVKNRKEMEFLELKQGSMTVAEY 148
Score = 34.7 bits (78), Expect(2) = 3e-06
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 366 YKFERIEDWISEIEQIARTLKLDEESQVLSVTHMVALSVE 485
Y E +E W+ EIE+I R ++ + VL THM+A E
Sbjct: 52 YDPEGVEAWLREIEKIFRVMECQDHQTVLFATHMLADEAE 91
>gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]
Length = 871
Score = 57.4 bits (137), Expect = 3e-06
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 14/195 (7%)
Frame = +1
Query: 82 PPTSGPATHKAGLSGTTAEERAPTPVPNVDPAPANIDDHAPTPVQAPIRVPNPEHEIVAN 261
P + P TH A L+ R PA+ PTP AP VP P
Sbjct: 263 PDPAAPVTH-ADLAAMEQRFRDMIMQMREQQKPAS-----PTPAPAPAPVPAP----APA 312
Query: 262 PAPNQVHTMEDDISLRQSKLMKEFMKYHLSKLNGGTNLKELRTGFQR*SKLRGL*NLMRS 441
P P + D +S ++K +++F KY+ + +G +L++ S L + M+
Sbjct: 313 PVPVAPQFVPDQLSA-EAKHLRDFRKYNPTTFDG--SLEDPTRAQMWLSSLETIFRYMKC 369
Query: 442 LKYSQLPI-----------WWLS---VLNVHKEVKTWSKFKELFDEKYFPMVERDKKLEE 579
+ ++ WW + +L TW +FKE F K+F RD K +E
Sbjct: 370 PEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQE 429
Query: 580 FRNLKQGNMSVRQYE 624
F NL+QG+M+V QY+
Sbjct: 430 FLNLEQGDMTVEQYD 444
>ref|XP_006597876.1| PREDICTED: uncharacterized protein LOC102664679 isoform X1 [Glycine
max]
Length = 417
Score = 42.7 bits (99), Expect(2) = 5e-06
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1
Query: 499 VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQY 621
V W FK+ F EKYFP +++K EF LKQG+M V +Y
Sbjct: 87 VVPWETFKQTFLEKYFPEDVKNRKEMEFLELKQGSMMVAEY 127
Score = 33.9 bits (76), Expect(2) = 5e-06
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 366 YKFERIEDWISEIEQIARTLKLDEESQVLSVTHMVALSVE 485
Y E +E W+ EIE+I + + +VL THM+A VE
Sbjct: 31 YDPEGVEAWLREIEKIFWVTECQDHQKVLFATHMLAYEVE 70
>ref|XP_006597877.1| PREDICTED: uncharacterized protein LOC102664679 isoform X2 [Glycine
max]
Length = 352
Score = 42.7 bits (99), Expect(2) = 5e-06
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1
Query: 499 VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQY 621
V W FK+ F EKYFP +++K EF LKQG+M V +Y
Sbjct: 87 VVPWETFKQTFLEKYFPEDVKNRKEMEFLELKQGSMMVAEY 127
Score = 33.9 bits (76), Expect(2) = 5e-06
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 366 YKFERIEDWISEIEQIARTLKLDEESQVLSVTHMVALSVE 485
Y E +E W+ EIE+I + + +VL THM+A VE
Sbjct: 31 YDPEGVEAWLREIEKIFWVTECQDHQKVLFATHMLAYEVE 70
>ref|XP_006597878.1| PREDICTED: uncharacterized protein LOC102664679 isoform X3 [Glycine
max]
Length = 348
Score = 42.7 bits (99), Expect(2) = 5e-06
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1
Query: 499 VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQY 621
V W FK+ F EKYFP +++K EF LKQG+M V +Y
Sbjct: 87 VVPWETFKQTFLEKYFPEDVKNRKEMEFLELKQGSMMVAEY 127
Score = 33.9 bits (76), Expect(2) = 5e-06
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 366 YKFERIEDWISEIEQIARTLKLDEESQVLSVTHMVALSVE 485
Y E +E W+ EIE+I + + +VL THM+A VE
Sbjct: 31 YDPEGVEAWLREIEKIFWVTECQDHQKVLFATHMLAYEVE 70
>ref|XP_006597879.1| PREDICTED: uncharacterized protein LOC102664679 isoform X4 [Glycine
max]
Length = 347
Score = 42.7 bits (99), Expect(2) = 5e-06
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1
Query: 499 VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQY 621
V W FK+ F EKYFP +++K EF LKQG+M V +Y
Sbjct: 87 VVPWETFKQTFLEKYFPEDVKNRKEMEFLELKQGSMMVAEY 127
Score = 33.9 bits (76), Expect(2) = 5e-06
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 366 YKFERIEDWISEIEQIARTLKLDEESQVLSVTHMVALSVE 485
Y E +E W+ EIE+I + + +VL THM+A VE
Sbjct: 31 YDPEGVEAWLREIEKIFWVTECQDHQKVLFATHMLAYEVE 70
>ref|XP_006598618.1| PREDICTED: uncharacterized protein LOC102669650 [Glycine max]
Length = 728
Score = 42.4 bits (98), Expect(2) = 6e-06
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +1
Query: 499 VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQY 621
V W F++ F EKYFP +++K EF LKQG+M+V +Y
Sbjct: 108 VVPWGTFRQTFLEKYFPEDVKNRKEMEFLELKQGSMTVAEY 148
Score = 33.9 bits (76), Expect(2) = 6e-06
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 366 YKFERIEDWISEIEQIARTLKLDEESQVLSVTHMVALSVE 485
Y E E W+ EIE+I R ++ + +VL THM+A E
Sbjct: 52 YDPEGAEAWLREIEKIFRVMECQDHQKVLFATHMLADEAE 91
>ref|XP_006584294.1| PREDICTED: uncharacterized protein LOC102668439 [Glycine max]
Length = 172
Score = 42.4 bits (98), Expect(2) = 7e-06
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +1
Query: 499 VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQY 621
V W F++ F EKYFP +++K EF LKQG+M+V +Y
Sbjct: 108 VVLWGTFRQTFLEKYFPEDVKNRKEMEFLELKQGSMTVAEY 148
Score = 33.9 bits (76), Expect(2) = 7e-06
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 366 YKFERIEDWISEIEQIARTLKLDEESQVLSVTHMVALSVE 485
Y E E W+ EIE+I R ++ + +VL THM+A E
Sbjct: 52 YDPEGAEAWLREIEKIFRVMECQDHQKVLFATHMLADEAE 91
>ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355506807|gb|AES87949.1|
Pol polyprotein [Medicago truncatula]
Length = 745
Score = 48.1 bits (113), Expect(2) = 8e-06
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +1
Query: 466 WWLSVLNVHKE---VKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQY 621
WW+++L + V TW+ F+ F +YFP R KK EF LKQGNMSV +Y
Sbjct: 93 WWVALLPTLGQEGAVVTWAVFRREFLRRYFPEDVRGKKEIEFLELKQGNMSVTEY 147
Score = 27.7 bits (60), Expect(2) = 8e-06
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 384 EDWISEIEQIARTLKLDEESQVLSVTHMVA 473
+ W+ EIE+I R ++ E+ +V TH +A
Sbjct: 58 QTWLKEIERIFRVMQCTEDQKVRFGTHQLA 87
>ref|XP_007099662.1| Gag protease polyprotein-like protein [Theobroma cacao]
gi|508728474|gb|EOY20371.1| Gag protease
polyprotein-like protein [Theobroma cacao]
Length = 665
Score = 51.2 bits (121), Expect(2) = 8e-06
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +1
Query: 466 WWLSVLNVHKEVKTWSKFKELFDEKYFPMVERDKKLEEFRNLKQGNMSVRQYE 624
WW SV + +TWS F FD +YF + +K EF +LKQGN++V +YE
Sbjct: 105 WWNSVKSRSATPQTWSDFLREFDGQYFTYFHQKEKKREFLSLKQGNLTVEEYE 157
Score = 24.6 bits (52), Expect(2) = 8e-06
Identities = 6/29 (20%), Positives = 20/29 (68%)
Frame = +3
Query: 384 EDWISEIEQIARTLKLDEESQVLSVTHMV 470
+DWI+++ + ++LD++ +++ T ++
Sbjct: 70 KDWINQVSKTLSDMRLDDDMKLMVATRLL 98