BLASTX nr result
ID: Cocculus22_contig00027161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00027161
(524 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera] 148 4e-48
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 151 2e-46
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] 151 2e-46
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi... 145 9e-45
gb|ACF87376.2| unknown [Zea mays] 134 5e-44
emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera] 137 9e-44
ref|XP_004250583.1| PREDICTED: uncharacterized protein LOC101261... 132 1e-43
emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera] 142 2e-43
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ... 142 6e-43
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 144 6e-43
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha... 144 6e-43
emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|72695... 140 1e-42
ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 ... 131 1e-42
ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773... 128 2e-42
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi... 135 8e-42
ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846... 131 2e-41
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 140 4e-41
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 132 7e-41
gb|ABA94365.1| retrotransposon protein, putative, unclassified [... 122 9e-41
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group] 122 2e-40
>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
Length = 1361
Score = 148 bits (373), Expect(2) = 4e-48
Identities = 71/123 (57%), Positives = 89/123 (72%)
Frame = +2
Query: 155 PGFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSET 334
PG+ DPQ P HVC+L +A+YGLKQAPRAWFHRFSSF++++GF S+AD S+F Y T
Sbjct: 968 PGYTDPQFPQHVCRLKRALYGLKQAPRAWFHRFSSFLLKHGFHSSQADSSLFFYHSSLGT 1027
Query: 335 MILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TK 514
+ LLLYVDD+I+TG+ SL+ +F L EF +KDLG L YFLG+E GL LS TK
Sbjct: 1028 VYLLLYVDDMIITGSTPSLVHTFITRLSNEFSMKDLGDLHYFLGVEVQANEKGLFLSQTK 1087
Query: 515 YTL 523
Y L
Sbjct: 1088 YAL 1090
Score = 69.3 bits (168), Expect(2) = 4e-48
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
+ +TFSPVV+P T+ ILS A W LHQLDVKNAFLHGFL E+ YM
Sbjct: 917 FGDTFSPVVRPATVRIILSLAVTSGWRLHQLDVKNAFLHGFLNEEVYM 964
>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
Length = 1501
Score = 151 bits (382), Expect(2) = 2e-46
Identities = 75/121 (61%), Positives = 92/121 (76%)
Frame = +2
Query: 155 PGFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSET 334
PG+IDP+ P HVC L KA+YGLKQAPRAWF RFSSF++ GF S+AD S+F++ + S
Sbjct: 952 PGYIDPRFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSSL 1011
Query: 335 MILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TK 514
+ LLLYVDDII+TGN SLL SFT+ L +EF KDLG LSYFLG+EA+ T GL +S K
Sbjct: 1012 IYLLLYVDDIIVTGNNPSLLDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLK 1071
Query: 515 Y 517
Y
Sbjct: 1072 Y 1072
Score = 60.5 bits (145), Expect(2) = 2e-46
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
Y +TFSPVVK TT+ +LS A W L QLDVKNAFL+G L E YM
Sbjct: 901 YTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNAFLNGTLTEHVYM 948
>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
Length = 1239
Score = 151 bits (382), Expect(2) = 2e-46
Identities = 75/121 (61%), Positives = 92/121 (76%)
Frame = +2
Query: 155 PGFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSET 334
PG+IDP+ P HVC L KA+YGLKQAPRAWF RFSSF++ GF S+AD S+F++ + S
Sbjct: 835 PGYIDPRFPTHVCLLKKALYGLKQAPRAWFQRFSSFLLTLGFSCSRADTSLFVFHQQSSL 894
Query: 335 MILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TK 514
+ LLLYVDDII+TGN SLL SFT+ L +EF KDLG LSYFLG+EA+ T GL +S K
Sbjct: 895 IYLLLYVDDIIVTGNNPSLLDSFTRKLHSEFATKDLGSLSYFLGLEASPTPDGLFISQLK 954
Query: 515 Y 517
Y
Sbjct: 955 Y 955
Score = 60.5 bits (145), Expect(2) = 2e-46
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
Y +TFSPVVK TT+ +LS A W L QLDVKNAFL+G L E YM
Sbjct: 784 YTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNAFLNGTLTEHVYM 831
>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1149
Score = 145 bits (366), Expect(2) = 9e-45
Identities = 68/120 (56%), Positives = 92/120 (76%)
Frame = +2
Query: 158 GFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSETM 337
GFID P HVC L+KA+YGLKQAPRAWF +FS F++ +GFV S +D S+F+ ++ + +
Sbjct: 983 GFIDKAHPDHVCLLHKALYGLKQAPRAWFDKFSKFLLSFGFVCSMSDPSLFVCVKNKDVI 1042
Query: 338 ILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TKY 517
+LLLYVDD+++TGN+S LL+S L +F++KDLGRLSYFLGI+A + S GL LS KY
Sbjct: 1043 MLLLYVDDMVITGNSSKLLSSLLSELNKQFKMKDLGRLSYFLGIQAQFHSQGLFLSQQKY 1102
Score = 60.8 bits (146), Expect(2) = 9e-45
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
Y ET+SPVV+ T+ +L +T M+WEL Q+DVKN FLHG L E YM
Sbjct: 931 YLETYSPVVRSATVRAVLHLSTIMNWELKQMDVKNGFLHGDLTETVYM 978
>gb|ACF87376.2| unknown [Zea mays]
Length = 526
Score = 134 bits (336), Expect(2) = 5e-44
Identities = 69/129 (53%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Frame = +2
Query: 140 LYGSTPG-FIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIY 316
+Y P F+DP PHHVCKL+K++YGLKQAPR WF RF++F+ GF SK D S+FI
Sbjct: 137 VYSQQPSDFVDPSLPHHVCKLHKSLYGLKQAPRTWFLRFTTFLSSIGFTQSKCDPSLFIL 196
Query: 317 RRHSETMILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGL 496
+ S T LLLYVDDIILT N S LL+ L +EF + DLG L +FLGIE + GL
Sbjct: 197 KTPSTTAYLLLYVDDIILTANTSHLLSHIISQLCSEFSMSDLGPLRHFLGIEVTPSDTGL 256
Query: 497 HLS*TKYTL 523
LS +Y L
Sbjct: 257 VLSQKQYAL 265
Score = 69.7 bits (169), Expect(2) = 5e-44
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAY 143
Y ETFSPV+KP TI ++LS AT SW +HQLDVKNAFLHG L E Y
Sbjct: 92 YGETFSPVIKPGTIRSVLSIATSFSWPIHQLDVKNAFLHGTLSETVY 138
>emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera]
Length = 1212
Score = 137 bits (345), Expect(2) = 9e-44
Identities = 64/123 (52%), Positives = 86/123 (69%)
Frame = +2
Query: 155 PGFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSET 334
PG+ +PQ P HVC+L +A+YGLKQAPRAWFHRFSSF+++ GF ++ D S+F+Y T
Sbjct: 862 PGYTNPQFPQHVCRLKRALYGLKQAPRAWFHRFSSFLLKLGFFSNQXDSSLFVYHSSVGT 921
Query: 335 MILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TK 514
+ LLLYVDD+++T + SS++ + L EF +KDL L YFLG+E GL LS TK
Sbjct: 922 IYLLLYVDDMVITXSNSSMVQTLITQLSKEFSMKDLSDLHYFLGVEVQANEKGLFLSQTK 981
Query: 515 YTL 523
Y L
Sbjct: 982 YAL 984
Score = 65.5 bits (158), Expect(2) = 9e-44
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
+ +TFSPVV+ TI ILS A W LHQLDVKNAFLHGFL E+ YM
Sbjct: 811 FGDTFSPVVRLATIRIILSLAITSGWRLHQLDVKNAFLHGFLNEEVYM 858
>ref|XP_004250583.1| PREDICTED: uncharacterized protein LOC101261089 [Solanum
lycopersicum]
Length = 1140
Score = 132 bits (332), Expect(2) = 1e-43
Identities = 66/120 (55%), Positives = 81/120 (67%)
Frame = +2
Query: 158 GFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSETM 337
GF DP +P HVC L K++YGLKQAPRAW+ RFS F+ GF SK D+S+FI+R +ET
Sbjct: 756 GFKDPSRPDHVCLLRKSLYGLKQAPRAWYQRFSDFVASIGFSHSKFDNSLFIFRHGTETA 815
Query: 338 ILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TKY 517
+LLYVDDIILT ++ L L +EF +KDLG LSYFLGI + GL LS KY
Sbjct: 816 FILLYVDDIILTASSEFLRLRIISRLASEFAMKDLGPLSYFLGIAVSRDKSGLFLSQKKY 875
Score = 70.1 bits (170), Expect(2) = 1e-43
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = +3
Query: 6 DETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
DETFSPVVKP TI +LS A SW++HQLDVKNAFLHG L E YM
Sbjct: 705 DETFSPVVKPATIRVVLSIALSKSWQIHQLDVKNAFLHGNLNETVYM 751
>emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]
Length = 1207
Score = 142 bits (359), Expect(2) = 2e-43
Identities = 72/121 (59%), Positives = 87/121 (71%)
Frame = +2
Query: 155 PGFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSET 334
PG+ID + P HVC L KA+YGLKQAPRAWF RFSSF + GF S+ D S+F++ + S
Sbjct: 856 PGYIDSRFPTHVCLLKKALYGLKQAPRAWFQRFSSFFLTLGFSSSRVDTSLFVFHQQSSL 915
Query: 335 MILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TK 514
+ LLLYVDDII+TGN SLL SFT L +EF KDLG LSYFLG+EA+ T GL + K
Sbjct: 916 IYLLLYVDDIIVTGNNPSLLDSFTCKLHSEFATKDLGSLSYFLGLEASPTPDGLFIGQLK 975
Query: 515 Y 517
Y
Sbjct: 976 Y 976
Score = 58.9 bits (141), Expect(2) = 2e-43
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
Y +TFSPVVK TT+ +LS A W L QLDVKN FL+G L E YM
Sbjct: 805 YTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNTFLNGTLTEHVYM 852
>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2301
Score = 142 bits (358), Expect(2) = 6e-43
Identities = 66/127 (51%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
Frame = +2
Query: 140 LYGSTP-GFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIY 316
+Y S P GF+D +P HVC L+K++YGLKQ+PRAWF +FS+++I++GFV S D S+FIY
Sbjct: 1015 VYMSQPKGFVDESKPDHVCLLHKSLYGLKQSPRAWFDKFSTYLIEFGFVCSIKDPSLFIY 1074
Query: 317 RRHSETMILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGL 496
RR + ++LLLYVDD+++TGN+S++L L +F +KDLGR+ YFLGI+A + S G+
Sbjct: 1075 RRGKDIIMLLLYVDDMLITGNSSTVLAKLLDELNKQFRMKDLGRMHYFLGIQATFHSSGM 1134
Query: 497 HLS*TKY 517
LS +Y
Sbjct: 1135 FLSQERY 1141
Score = 57.8 bits (138), Expect(2) = 6e-43
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYMA 149
Y ET+SPVV+ T+ +L AT + W++ Q+DV NAFLHG L E YM+
Sbjct: 970 YLETYSPVVRTATVRIVLHIATVLQWDIKQMDVANAFLHGDLHETVYMS 1018
>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7267767|emb|CAB81170.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1515
Score = 144 bits (364), Expect(2) = 6e-43
Identities = 70/122 (57%), Positives = 88/122 (72%)
Frame = +2
Query: 155 PGFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSET 334
PGF DP +P +VCKL KAIY LKQAPRAWF +FSS++++YGF+ S +D S+F+Y + +
Sbjct: 1048 PGFEDPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDPSLFVYLKGRDV 1107
Query: 335 MILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TK 514
M LLLYVDD+ILTGN LL L EF +KD+G L YFLGI+A Y + GL LS K
Sbjct: 1108 MFLLLYVDDMILTGNNDVLLQQLLNILSTEFRMKDMGALHYFLGIQAHYHNDGLFLSQEK 1167
Query: 515 YT 520
YT
Sbjct: 1168 YT 1169
Score = 55.5 bits (132), Expect(2) = 6e-43
Identities = 27/48 (56%), Positives = 32/48 (66%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
Y ET+SPVV+ T+ +IL AT W L QLDVKNAFLH L E +M
Sbjct: 997 YVETYSPVVRSATVRSILHVATINKWSLKQLDVKNAFLHDELKETVFM 1044
>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
Length = 1392
Score = 144 bits (364), Expect(2) = 6e-43
Identities = 70/122 (57%), Positives = 88/122 (72%)
Frame = +2
Query: 155 PGFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSET 334
PGF DP +P +VCKL KAIY LKQAPRAWF +FSS++++YGF+ S +D S+F+Y + +
Sbjct: 925 PGFEDPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDPSLFVYLKGRDV 984
Query: 335 MILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TK 514
M LLLYVDD+ILTGN LL L EF +KD+G L YFLGI+A Y + GL LS K
Sbjct: 985 MFLLLYVDDMILTGNNDVLLQQLLNILSTEFRMKDMGALHYFLGIQAHYHNDGLFLSQEK 1044
Query: 515 YT 520
YT
Sbjct: 1045 YT 1046
Score = 55.5 bits (132), Expect(2) = 6e-43
Identities = 27/48 (56%), Positives = 32/48 (66%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
Y ET+SPVV+ T+ +IL AT W L QLDVKNAFLH L E +M
Sbjct: 874 YVETYSPVVRSATVRSILHVATINKWSLKQLDVKNAFLHDELKETVFM 921
>emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|7269574|emb|CAB79576.1|
putative protein [Arabidopsis thaliana]
Length = 1318
Score = 140 bits (353), Expect(2) = 1e-42
Identities = 63/120 (52%), Positives = 89/120 (74%)
Frame = +2
Query: 158 GFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSETM 337
GF+DP +P HVC L+K+IYGLKQ+PRAWF +FS+F++++GF SK+D S+FIY ++ +
Sbjct: 843 GFVDPSKPDHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIYAHNNNLI 902
Query: 338 ILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TKY 517
+LLLYVDD+++TGN+S LTS L EF + D+G+L YFLGI+ GL +S KY
Sbjct: 903 LLLLYVDDMVITGNSSQTLTSLLAALNKEFRMTDMGQLHYFLGIQVQRQQNGLFMSQQKY 962
Score = 58.5 bits (140), Expect(2) = 1e-42
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
Y ET+SPVV+ T+ +L AT ++W++ Q+DVKNAFLHG L E YM
Sbjct: 791 YLETYSPVVRTPTVRLVLHLATALNWDIKQMDVKNAFLHGDLKETVYM 838
>ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 [Sorghum bicolor]
gi|241947143|gb|EES20288.1| hypothetical protein
SORBIDRAFT_0013s009070 [Sorghum bicolor]
Length = 1219
Score = 131 bits (330), Expect(2) = 1e-42
Identities = 65/123 (52%), Positives = 85/123 (69%)
Frame = +2
Query: 155 PGFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSET 334
PGFID P HVC L K++YGLKQAPRAW+ RF SF+ Q GF S +D S+F+Y+ ++T
Sbjct: 394 PGFIDSAAPDHVCLLQKSLYGLKQAPRAWYQRFGSFVQQSGFTASTSDSSLFVYKEGADT 453
Query: 335 MILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TK 514
LLLYVDDIILT ++ +LL T+ L +EF + DLG L +FLGI T+ GL LS +
Sbjct: 454 AYLLLYVDDIILTASSPALLRRITELLHSEFAMTDLGDLHHFLGIAVTRTTGGLFLSQRQ 513
Query: 515 YTL 523
Y +
Sbjct: 514 YAV 516
Score = 67.4 bits (163), Expect(2) = 1e-42
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAY 143
YDETFSPVVKP TI +L A +W +HQLDVKNAFLHG L E Y
Sbjct: 343 YDETFSPVVKPATIRVVLIIAASAAWPIHQLDVKNAFLHGHLNETVY 389
>ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773259 [Setaria italica]
Length = 1950
Score = 128 bits (322), Expect(2) = 2e-42
Identities = 64/123 (52%), Positives = 85/123 (69%)
Frame = +2
Query: 155 PGFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSET 334
PGF+DP P +VC+L K++YGLKQAPRAW+ RF++FI Q GFV S +D S+FI R +
Sbjct: 1562 PGFVDPGAPDYVCRLQKSLYGLKQAPRAWYQRFATFIGQLGFVTSASDTSLFILREGTSL 1621
Query: 335 MILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TK 514
LLLYVDDI+LT ++S+LL L +EF + DLG L +FLGI +S GL LS +
Sbjct: 1622 SYLLLYVDDIVLTASSSALLQRIMARLSSEFAMTDLGALHHFLGITVTRSSDGLFLSQRQ 1681
Query: 515 YTL 523
Y +
Sbjct: 1682 YAV 1684
Score = 70.1 bits (170), Expect(2) = 2e-42
Identities = 32/47 (68%), Positives = 36/47 (76%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAY 143
YDETFSPVVKP TI ++LS A +W +HQLDVKNAFLHG L E Y
Sbjct: 1511 YDETFSPVVKPATIRSVLSIAASRAWPIHQLDVKNAFLHGHLEETVY 1557
>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1402
Score = 135 bits (341), Expect(2) = 8e-42
Identities = 61/120 (50%), Positives = 88/120 (73%)
Frame = +2
Query: 158 GFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSETM 337
GF+D +P HVC L+K+IYGLKQ+PRAWF +FS+F++++GF SK+D S+FIY ++ +
Sbjct: 1054 GFVDKSKPTHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIYAHNNNLI 1113
Query: 338 ILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TKY 517
+LLLYVDD+++TGN+S L+S L EF + D+G+L YFLGI+ GL +S KY
Sbjct: 1114 LLLLYVDDMVITGNSSQTLSSLLAALNKEFRMTDMGQLHYFLGIQVQRNQHGLFMSQQKY 1173
Score = 60.5 bits (145), Expect(2) = 8e-42
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
Y ET+SPVV+ T+ +L AT ++WEL Q+DVKNAFLHG L E YM
Sbjct: 1002 YLETYSPVVRTPTVQLVLHLATALNWELKQMDVKNAFLHGDLNETVYM 1049
>ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846463 [Brachypodium
distachyon]
Length = 989
Score = 131 bits (330), Expect(2) = 2e-41
Identities = 66/123 (53%), Positives = 83/123 (67%)
Frame = +2
Query: 155 PGFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSET 334
PGF DP+ P HVCKL +A+YGLKQ+PRAW+ S + Q GFV SKAD S+FI+
Sbjct: 606 PGFEDPRCPQHVCKLQRALYGLKQSPRAWYACLSDKLHQLGFVASKADTSLFIFDHQGVM 665
Query: 335 MILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TK 514
+ +L+YVDDI+L G++ S + TL F IKDLGRL YFLGIEAAY+ G+ L K
Sbjct: 666 VYMLVYVDDIVLAGSSLSAVDQLVATLSGSFPIKDLGRLEYFLGIEAAYSFEGMVLMQHK 725
Query: 515 YTL 523
Y L
Sbjct: 726 YAL 728
Score = 63.2 bits (152), Expect(2) = 2e-41
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
Y +TFSPVVKP T+ +LS A W L Q+DV N+FLHGFL E+ YM
Sbjct: 555 YHDTFSPVVKPVTVRLVLSLAASRGWCLRQVDVSNSFLHGFLTEEVYM 602
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 140 bits (354), Expect(2) = 4e-41
Identities = 64/123 (52%), Positives = 87/123 (70%)
Frame = +2
Query: 155 PGFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSET 334
PGF+D PHHVC+L+KA+YGLKQAPRAW+ S+++ GFV S AD S+F R
Sbjct: 1066 PGFVDKDNPHHVCRLHKALYGLKQAPRAWYQELRSYLLTQGFVNSIADTSLFTLRHKRTI 1125
Query: 335 MILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TK 514
+ +L+YVDD+++TG+ ++++T F L A F +KDLG +SYFLGIEA TS GLHL +
Sbjct: 1126 LYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATRTSKGLHLMQKR 1185
Query: 515 YTL 523
Y L
Sbjct: 1186 YVL 1188
Score = 53.1 bits (126), Expect(2) = 4e-41
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
+ ETFSPV+K TT+ ++L A W + Q+DV NAFL G L ++ Y+
Sbjct: 1015 FKETFSPVIKSTTVRSVLHVAVSKGWSIRQIDVNNAFLQGTLSDEVYV 1062
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 132 bits (332), Expect(2) = 7e-41
Identities = 62/120 (51%), Positives = 84/120 (70%)
Frame = +2
Query: 158 GFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSETM 337
GF+DP+ P HVCKL +++YGLKQAPRAWF FS ++ + GF+ S+AD+SMF + +
Sbjct: 1003 GFVDPKFPQHVCKLRRSLYGLKQAPRAWFRCFSDYLEELGFLESRADYSMFTFNNRGIYI 1062
Query: 338 ILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TKY 517
ILL+YVDDI++TGN SS ++ L + F +KDLG + YFLGIE Y LHL+ KY
Sbjct: 1063 ILLIYVDDILITGNNSSHISHLIHNLNSLFSMKDLGSVHYFLGIETVYNGDHLHLTQHKY 1122
Score = 60.8 bits (146), Expect(2) = 7e-41
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAYM 146
Y ETFSPVVK +TI +L+ A W + QLDV+N FLHG+L ED YM
Sbjct: 951 YTETFSPVVKHSTIRLVLALAVSHRWPIRQLDVQNVFLHGYLNEDIYM 998
>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1064
Score = 122 bits (307), Expect(2) = 9e-41
Identities = 61/122 (50%), Positives = 82/122 (67%)
Frame = +2
Query: 158 GFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRRHSETM 337
GF+DP P VC L K++YGLKQAPRAW+ RF+++I Q GF S +D S+FIY+
Sbjct: 727 GFVDPSAPTAVCLLQKSLYGLKQAPRAWYQRFATYICQLGFTSSASDTSLFIYKDGDNIA 786
Query: 338 ILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHLS*TKY 517
LLLYVDDI+LT +++SLL T L +EF + DLG L +FLGI ++ GL LS +Y
Sbjct: 787 YLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGDLHFFLGISVTRSADGLFLSQRQY 846
Query: 518 TL 523
+
Sbjct: 847 AV 848
Score = 70.1 bits (170), Expect(2) = 9e-41
Identities = 33/47 (70%), Positives = 35/47 (74%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAY 143
YDETFSPVVKP TI +LS A SW +HQLDVKNAFLHG L E Y
Sbjct: 675 YDETFSPVVKPATIRVVLSIAASRSWPIHQLDVKNAFLHGNLEETVY 721
>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1480
Score = 122 bits (306), Expect(2) = 2e-40
Identities = 61/127 (48%), Positives = 84/127 (66%)
Frame = +2
Query: 143 YGSTPGFIDPQQPHHVCKLNKAIYGLKQAPRAWFHRFSSFIIQYGFV*SKADHSMFIYRR 322
Y GF+DP P+ VC L K++YGLKQAPRAW+ RF+++I Q GF S ++ S+F+Y+
Sbjct: 1090 YQQPSGFVDPSAPNAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASNTSLFVYKD 1149
Query: 323 HSETMILLLYVDDIILTGNASSLLTSFTKTLGAEFEIKDLGRLSYFLGIEAAYTSLGLHL 502
LLLYVDDIILT ++++LL T L +EF + DLG L +FLGI +S GL L
Sbjct: 1150 GDNIAYLLLYVDDIILTASSATLLHHITARLHSEFAMTDLGDLHFFLGISVTRSSDGLFL 1209
Query: 503 S*TKYTL 523
S +Y +
Sbjct: 1210 SQRQYVV 1216
Score = 69.7 bits (169), Expect(2) = 2e-40
Identities = 33/47 (70%), Positives = 35/47 (74%)
Frame = +3
Query: 3 YDETFSPVVKPTTILTILSFATFMSWELHQLDVKNAFLHGFLFEDAY 143
YDETFSPVVKP TI +LS A SW +HQLDVKNAFLHG L E Y
Sbjct: 1043 YDETFSPVVKPATIHVVLSIAASRSWPIHQLDVKNAFLHGNLEETVY 1089