BLASTX nr result
ID: Cocculus22_contig00027160
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00027160
(390 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007016644.1| DNA repair (Rad51) family protein isoform 2 ... 125 8e-27
ref|XP_007016643.1| DNA repair (Rad51) family protein isoform 1 ... 125 8e-27
ref|XP_004487150.1| PREDICTED: DNA repair protein RAD51 homolog ... 119 3e-25
ref|XP_004170620.1| PREDICTED: DNA repair protein RAD51 homolog ... 118 1e-24
ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog ... 118 1e-24
ref|XP_004294689.1| PREDICTED: DNA repair protein RAD51 homolog ... 117 2e-24
ref|XP_004251280.1| PREDICTED: DNA repair protein RAD51 homolog ... 116 4e-24
emb|CBI16239.3| unnamed protein product [Vitis vinifera] 114 1e-23
ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog ... 114 1e-23
ref|XP_007206225.1| hypothetical protein PRUPE_ppa015365mg, part... 112 5e-23
ref|XP_003547508.1| PREDICTED: DNA repair protein RAD51 homolog ... 112 5e-23
emb|CAN73845.1| hypothetical protein VITISV_001338 [Vitis vinifera] 112 7e-23
ref|XP_006366411.1| PREDICTED: DNA repair protein RAD51 homolog ... 111 9e-23
ref|XP_006409886.1| hypothetical protein EUTSA_v10017710mg [Eutr... 110 2e-22
ref|XP_002530246.1| conserved hypothetical protein [Ricinus comm... 110 2e-22
ref|XP_003597136.1| DNA repair protein RAD51-like protein [Medic... 109 3e-22
gb|AAX40988.1| RAD51B [Arabidopsis thaliana] 109 5e-22
ref|NP_001031438.1| DNA repair protein RAD51B [Arabidopsis thali... 109 5e-22
ref|NP_001118403.1| DNA repair protein RAD51B [Arabidopsis thali... 109 5e-22
ref|XP_006294373.1| hypothetical protein CARUB_v10023390mg, part... 108 1e-21
>ref|XP_007016644.1| DNA repair (Rad51) family protein isoform 2 [Theobroma cacao]
gi|508787007|gb|EOY34263.1| DNA repair (Rad51) family
protein isoform 2 [Theobroma cacao]
Length = 377
Score = 125 bits (313), Expect = 8e-27
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGIHWAHAVT RLVLEA SGQRFIKVAKSPISPPLAFPF I SSGISLLSD+G+E+ G E
Sbjct: 297 LGIHWAHAVTTRLVLEAKSGQRFIKVAKSPISPPLAFPFHITSSGISLLSDEGMELMGPE 356
Query: 208 INTIHCQGYNEI 173
IN+IHCQG+NEI
Sbjct: 357 INSIHCQGHNEI 368
>ref|XP_007016643.1| DNA repair (Rad51) family protein isoform 1 [Theobroma cacao]
gi|590590126|ref|XP_007016645.1| DNA repair (Rad51)
family protein isoform 1 [Theobroma cacao]
gi|508787006|gb|EOY34262.1| DNA repair (Rad51) family
protein isoform 1 [Theobroma cacao]
gi|508787008|gb|EOY34264.1| DNA repair (Rad51) family
protein isoform 1 [Theobroma cacao]
Length = 371
Score = 125 bits (313), Expect = 8e-27
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGIHWAHAVT RLVLEA SGQRFIKVAKSPISPPLAFPF I SSGISLLSD+G+E+ G E
Sbjct: 291 LGIHWAHAVTTRLVLEAKSGQRFIKVAKSPISPPLAFPFHITSSGISLLSDEGMELMGPE 350
Query: 208 INTIHCQGYNEI 173
IN+IHCQG+NEI
Sbjct: 351 INSIHCQGHNEI 362
>ref|XP_004487150.1| PREDICTED: DNA repair protein RAD51 homolog 2-like isoform X1
[Cicer arietinum]
Length = 367
Score = 119 bits (299), Expect = 3e-25
Identities = 57/73 (78%), Positives = 64/73 (87%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGI+WAHAVTIRLVLE+ SGQRFIK+AKSP+SPPLAFPF I SSGI LL DDG+E+ G E
Sbjct: 291 LGINWAHAVTIRLVLESRSGQRFIKLAKSPMSPPLAFPFNITSSGIVLLDDDGIEMKGPE 350
Query: 208 INTIHCQGYNEIF 170
INTIHCQG N +F
Sbjct: 351 INTIHCQGQNALF 363
>ref|XP_004170620.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cucumis
sativus]
Length = 379
Score = 118 bits (295), Expect = 1e-24
Identities = 54/75 (72%), Positives = 67/75 (89%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LG+HWAH+VTIRLVLEA SGQRFIK+AKSP+SPPLAFPF I +SGISLLS++G E+ G E
Sbjct: 299 LGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFTITASGISLLSNNGEELSGAE 358
Query: 208 INTIHCQGYNEIFTS 164
IN IHCQG+++I ++
Sbjct: 359 INEIHCQGHSDIISN 373
>ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cucumis
sativus]
Length = 371
Score = 118 bits (295), Expect = 1e-24
Identities = 54/75 (72%), Positives = 67/75 (89%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LG+HWAH+VTIRLVLEA SGQRFIK+AKSP+SPPLAFPF I +SGISLLS++G E+ G E
Sbjct: 291 LGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFTITASGISLLSNNGEELSGAE 350
Query: 208 INTIHCQGYNEIFTS 164
IN IHCQG+++I ++
Sbjct: 351 INEIHCQGHSDIISN 365
>ref|XP_004294689.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Fragaria vesca
subsp. vesca]
Length = 370
Score = 117 bits (292), Expect = 2e-24
Identities = 56/72 (77%), Positives = 64/72 (88%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGIHWAHAVTIRLVL+A G+RFIK+AKSPISP LAFPF I SSGISLL+DDG+E+ G E
Sbjct: 291 LGIHWAHAVTIRLVLDAKFGKRFIKLAKSPISPSLAFPFNITSSGISLLTDDGIELSGPE 350
Query: 208 INTIHCQGYNEI 173
INTIHCQG++ I
Sbjct: 351 INTIHCQGHSGI 362
>ref|XP_004251280.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Solanum
lycopersicum]
Length = 371
Score = 116 bits (290), Expect = 4e-24
Identities = 53/72 (73%), Positives = 65/72 (90%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGIHWAHAV+IRL+ E+ SGQRFIK+AKSP+SPPLAFPF I SSGISLL+DDGVE+ G E
Sbjct: 291 LGIHWAHAVSIRLIFESRSGQRFIKLAKSPVSPPLAFPFNITSSGISLLNDDGVEMPGPE 350
Query: 208 INTIHCQGYNEI 173
I++I CQG+N++
Sbjct: 351 IHSISCQGHNDV 362
>emb|CBI16239.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 114 bits (285), Expect = 1e-23
Identities = 54/72 (75%), Positives = 64/72 (88%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGIHWAHAVTIRLVLEA +GQRF+KVAKSPISPPLAFPF I SGISLL+D+G+E+ G +
Sbjct: 291 LGIHWAHAVTIRLVLEAKAGQRFLKVAKSPISPPLAFPFNITPSGISLLNDEGIEMKGPQ 350
Query: 208 INTIHCQGYNEI 173
I+TIH QG+ +I
Sbjct: 351 ISTIHYQGHEDI 362
>ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Vitis vinifera]
Length = 439
Score = 114 bits (285), Expect = 1e-23
Identities = 54/72 (75%), Positives = 64/72 (88%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGIHWAHAVTIRLVLEA +GQRF+KVAKSPISPPLAFPF I SGISLL+D+G+E+ G +
Sbjct: 291 LGIHWAHAVTIRLVLEAKAGQRFLKVAKSPISPPLAFPFNITPSGISLLNDEGIEMKGPQ 350
Query: 208 INTIHCQGYNEI 173
I+TIH QG+ +I
Sbjct: 351 ISTIHYQGHEDI 362
>ref|XP_007206225.1| hypothetical protein PRUPE_ppa015365mg, partial [Prunus persica]
gi|462401867|gb|EMJ07424.1| hypothetical protein
PRUPE_ppa015365mg, partial [Prunus persica]
Length = 357
Score = 112 bits (280), Expect = 5e-23
Identities = 52/67 (77%), Positives = 61/67 (91%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGIHWAHAVTIRLVL++ SG+RFIK+AKSPISPPLAFP+ I SSGI+LL DDG+E+ G E
Sbjct: 291 LGIHWAHAVTIRLVLDSKSGKRFIKLAKSPISPPLAFPYNITSSGITLLDDDGIELTGPE 350
Query: 208 INTIHCQ 188
IN+IHCQ
Sbjct: 351 INSIHCQ 357
>ref|XP_003547508.1| PREDICTED: DNA repair protein RAD51 homolog 2-like isoform X1
[Glycine max]
Length = 378
Score = 112 bits (280), Expect = 5e-23
Identities = 54/68 (79%), Positives = 60/68 (88%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGI+WAHAVTIRLVLEA SGQRFIK+AKSPIS PLAFPF I SSG+ LL D+G+E+ G E
Sbjct: 291 LGINWAHAVTIRLVLEARSGQRFIKLAKSPISAPLAFPFKITSSGLVLLDDEGIEMKGPE 350
Query: 208 INTIHCQG 185
INTIHCQG
Sbjct: 351 INTIHCQG 358
>emb|CAN73845.1| hypothetical protein VITISV_001338 [Vitis vinifera]
Length = 453
Score = 112 bits (279), Expect = 7e-23
Identities = 53/69 (76%), Positives = 62/69 (89%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGIHWAHAVTIRLVLEA +GQRF+KVAKSPISPPLAFPF I SGISLL+D+G+E+ G +
Sbjct: 236 LGIHWAHAVTIRLVLEAKAGQRFLKVAKSPISPPLAFPFNITPSGISLLNDEGIEMKGPQ 295
Query: 208 INTIHCQGY 182
I+TIH QG+
Sbjct: 296 ISTIHYQGH 304
>ref|XP_006366411.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Solanum
tuberosum]
Length = 371
Score = 111 bits (278), Expect = 9e-23
Identities = 51/72 (70%), Positives = 63/72 (87%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGIHWAHAV+IRL+ E+ SGQRFIK+AKSP+SPP AF F I SSGISLL+DDGVE+ G E
Sbjct: 291 LGIHWAHAVSIRLIFESRSGQRFIKLAKSPVSPPFAFAFNITSSGISLLNDDGVEMPGPE 350
Query: 208 INTIHCQGYNEI 173
I++I CQG+N++
Sbjct: 351 IHSISCQGHNDV 362
>ref|XP_006409886.1| hypothetical protein EUTSA_v10017710mg [Eutrema salsugineum]
gi|557111055|gb|ESQ51339.1| hypothetical protein
EUTSA_v10017710mg [Eutrema salsugineum]
Length = 369
Score = 110 bits (275), Expect = 2e-22
Identities = 54/72 (75%), Positives = 63/72 (87%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGI+WAHAVTIRLVLEA SGQR IKVAKSPISPPLAFPF I S+GISLLSD+G E+ G
Sbjct: 291 LGINWAHAVTIRLVLEAKSGQRIIKVAKSPISPPLAFPFHITSAGISLLSDNGTELKGPG 350
Query: 208 INTIHCQGYNEI 173
INTIH +G++++
Sbjct: 351 INTIHARGHSDM 362
>ref|XP_002530246.1| conserved hypothetical protein [Ricinus communis]
gi|223530250|gb|EEF32152.1| conserved hypothetical
protein [Ricinus communis]
Length = 238
Score = 110 bits (275), Expect = 2e-22
Identities = 51/71 (71%), Positives = 61/71 (85%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGIHWAHAVT+RLVLEA GQR+IKVAKSPISPP++FPF I +SGI+LL DDG E+ G E
Sbjct: 163 LGIHWAHAVTVRLVLEAKLGQRYIKVAKSPISPPMSFPFNITASGIALLDDDGTELRGKE 222
Query: 208 INTIHCQGYNE 176
IN+I CQG ++
Sbjct: 223 INSIQCQGLSQ 233
>ref|XP_003597136.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|355486184|gb|AES67387.1| DNA repair protein
RAD51-like protein [Medicago truncatula]
Length = 484
Score = 109 bits (273), Expect = 3e-22
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGI+WAHAVTIRLVLE+ SG+RFIK+AKSP+SPPLAFPF I SSGI LL +DG+E+ G E
Sbjct: 339 LGINWAHAVTIRLVLESKSGKRFIKLAKSPMSPPLAFPFHITSSGIVLLDNDGIEMKGPE 398
Query: 208 INTIHCQG 185
I+TIHCQG
Sbjct: 399 ISTIHCQG 406
>gb|AAX40988.1| RAD51B [Arabidopsis thaliana]
Length = 338
Score = 109 bits (272), Expect = 5e-22
Identities = 53/72 (73%), Positives = 63/72 (87%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGI+WAHAVTIRLVLEA SGQR IKVAKSP+SPPLAFPF I S+GISLLSD+G E+ G
Sbjct: 259 LGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISLLSDNGTELKGPG 318
Query: 208 INTIHCQGYNEI 173
INTIH +G++++
Sbjct: 319 INTIHARGHSDM 330
>ref|NP_001031438.1| DNA repair protein RAD51B [Arabidopsis thaliana]
gi|83305358|sp|Q9SK02.2|RA51B_ARATH RecName: Full=DNA
repair protein RAD51 homolog 2; Short=AtRAD51B
gi|58430738|dbj|BAD89163.1| AtRAD51Balpha [Arabidopsis
thaliana] gi|330253047|gb|AEC08141.1| DNA repair protein
RAD51B [Arabidopsis thaliana]
Length = 370
Score = 109 bits (272), Expect = 5e-22
Identities = 53/72 (73%), Positives = 63/72 (87%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGI+WAHAVTIRLVLEA SGQR IKVAKSP+SPPLAFPF I S+GISLLSD+G E+ G
Sbjct: 291 LGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISLLSDNGTELKGPG 350
Query: 208 INTIHCQGYNEI 173
INTIH +G++++
Sbjct: 351 INTIHARGHSDM 362
>ref|NP_001118403.1| DNA repair protein RAD51B [Arabidopsis thaliana]
gi|330253048|gb|AEC08142.1| DNA repair protein RAD51B
[Arabidopsis thaliana]
Length = 338
Score = 109 bits (272), Expect = 5e-22
Identities = 53/72 (73%), Positives = 63/72 (87%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGI+WAHAVTIRLVLEA SGQR IKVAKSP+SPPLAFPF I S+GISLLSD+G E+ G
Sbjct: 259 LGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISLLSDNGTELKGPG 318
Query: 208 INTIHCQGYNEI 173
INTIH +G++++
Sbjct: 319 INTIHARGHSDM 330
>ref|XP_006294373.1| hypothetical protein CARUB_v10023390mg, partial [Capsella rubella]
gi|482563081|gb|EOA27271.1| hypothetical protein
CARUB_v10023390mg, partial [Capsella rubella]
Length = 390
Score = 108 bits (269), Expect = 1e-21
Identities = 52/72 (72%), Positives = 63/72 (87%)
Frame = -3
Query: 388 LGIHWAHAVTIRLVLEANSGQRFIKVAKSPISPPLAFPFAINSSGISLLSDDGVEVDGLE 209
LGI+WAHAVTIRLVLEA SGQR IKVAKSP+SPPLAFPF I ++GISLLSD+G E+ G
Sbjct: 311 LGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITAAGISLLSDNGTELKGPG 370
Query: 208 INTIHCQGYNEI 173
INTIH +G++++
Sbjct: 371 INTIHARGHSDM 382