BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00027090
         (264 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]   123   2e-26
ref|XP_007224434.1| hypothetical protein PRUPE_ppa021491mg [Prun...   119   6e-25
ref|XP_006474468.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
gb|EYU20314.1| hypothetical protein MIMGU_mgv1a003025mg [Mimulus...   107   1e-21
ref|XP_006453029.1| hypothetical protein CICLE_v10007870mg [Citr...   106   4e-21
ref|XP_007136868.1| hypothetical protein PHAVU_009G080600g [Phas...   104   1e-20
ref|XP_007012378.1| Pentatricopeptide repeat superfamily protein...   104   1e-20
ref|XP_006578089.1| PREDICTED: pentatricopeptide repeat-containi...   103   3e-20
ref|XP_002308534.1| hypothetical protein POPTR_0006s23980g [Popu...   100   4e-19
ref|XP_006849607.1| hypothetical protein AMTR_s00024p00204830 [A...    99   6e-19
gb|EXB48288.1| hypothetical protein L484_003771 [Morus notabilis]      93   4e-17
ref|XP_006368374.1| pentatricopeptide repeat-containing family p...    84   2e-14
ref|XP_006303167.1| hypothetical protein CARUB_v10008555mg [Caps...    84   3e-14
gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]               82   1e-13
ref|NP_172694.1| pentatricopeptide repeat-containing protein [Ar...    82   1e-13
ref|XP_006303621.1| hypothetical protein CARUB_v10011428mg [Caps...    81   2e-13
gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]             81   2e-13
ref|NP_563911.1| pentatricopeptide repeat-containing protein [Ar...    81   2e-13
ref|XP_007224062.1| hypothetical protein PRUPE_ppa015300mg, part...    80   2e-13
ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selag...    80   2e-13

>emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  123 bits (309), Expect = 2e-26
 Identities = 57/87 (65%), Positives = 69/87 (79%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDTVT+TT+IDGYCKR ELEEA K MEEMV++NCEPNV+TYNA+I G CL+G        
Sbjct: 319 PDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRM 378

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
               RL+GLK+NVATH S+L+GLC+VG
Sbjct: 379 MTRMRLNGLKDNVATHTSILKGLCVVG 405



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/52 (53%), Positives = 34/52 (65%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSG 157
           PD  T+TTII GYCK   +E A    +EM    C+PN+VTYN +INGFC  G
Sbjct: 251 PDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKG 299


>ref|XP_007224434.1| hypothetical protein PRUPE_ppa021491mg [Prunus persica]
           gi|462421370|gb|EMJ25633.1| hypothetical protein
           PRUPE_ppa021491mg [Prunus persica]
          Length = 557

 Score =  119 bits (297), Expect = 6e-25
 Identities = 53/87 (60%), Positives = 68/87 (78%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDTVT+TT+IDGYCK+ EL+EA +CM+EM  Q CEPN+ TYNALI+GFCLSG        
Sbjct: 224 PDTVTYTTLIDGYCKKGELKEAMECMKEMGKQGCEPNLFTYNALIHGFCLSGHVSEAKRM 283

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
               RL+G+K+N+ATH ++L+GLCIVG
Sbjct: 284 LTRMRLNGVKDNIATHTAILKGLCIVG 310


>ref|XP_006474468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Citrus sinensis]
           gi|343887304|dbj|BAK61850.1| PPR containing protein
           [Citrus unshiu]
          Length = 567

 Score =  110 bits (274), Expect = 3e-22
 Identities = 47/87 (54%), Positives = 64/87 (73%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+ VT+TT+IDGYCK+ ELEEA KCM EM+ + C PN +TYNA+I G C++G        
Sbjct: 260 PNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKML 319

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
               RL+G K+NV+TH+S+L+GLC+VG
Sbjct: 320 MAKMRLNGFKDNVSTHKSMLKGLCVVG 346


>gb|EYU20314.1| hypothetical protein MIMGU_mgv1a003025mg [Mimulus guttatus]
          Length = 614

 Score =  107 bits (268), Expect = 1e-21
 Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQ--NCEPNVVTYNALINGFCLSGXXXXXX 175
           PDTV++TT+IDGYCK+ E + A  C +EMV++  NCEPNV TYN LINGFCL+G      
Sbjct: 319 PDTVSYTTLIDGYCKKGEFKNAIMCFDEMVSKGDNCEPNVFTYNVLINGFCLNGDVDEAR 378

Query: 176 XXXXXXRLSGLKENVATHRSLLQGLCIVG 262
                 R +G+KEN+ATH SLL+G C+ G
Sbjct: 379 RMMTRMRFAGVKENLATHTSLLKGYCVAG 407


>ref|XP_006453029.1| hypothetical protein CICLE_v10007870mg [Citrus clementina]
           gi|557556255|gb|ESR66269.1| hypothetical protein
           CICLE_v10007870mg [Citrus clementina]
          Length = 567

 Score =  106 bits (264), Expect = 4e-21
 Identities = 47/87 (54%), Positives = 63/87 (72%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+ VT+TT+IDGYCK+ ELEEA KCM EM+ +   PN  TYNA+I G C++G        
Sbjct: 260 PNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGSRPNEWTYNAMIYGLCINGRVDEAKML 319

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
               RL+GLK+NV+TH+S+L+GLC+VG
Sbjct: 320 MAKMRLNGLKDNVSTHKSMLKGLCVVG 346


>ref|XP_007136868.1| hypothetical protein PHAVU_009G080600g [Phaseolus vulgaris]
           gi|561009955|gb|ESW08862.1| hypothetical protein
           PHAVU_009G080600g [Phaseolus vulgaris]
          Length = 550

 Score =  104 bits (260), Expect = 1e-20
 Identities = 49/87 (56%), Positives = 63/87 (72%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PD V+FTT+I GY KR E ++A +C++EM+ + C PNVVTYNAL+ G CLSG        
Sbjct: 265 PDVVSFTTLIYGYSKRGEFKKAVECLKEMMERGCSPNVVTYNALVEGLCLSGEVDEAKKM 324

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
               RL+GLK+NVAT+ SLL+GLCIVG
Sbjct: 325 MSRMRLNGLKDNVATNTSLLKGLCIVG 351



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/52 (51%), Positives = 33/52 (63%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSG 157
           PD  T TT+I G+CK   +  A K  +EM    CEPN+VTYN LI+GFC  G
Sbjct: 197 PDVYTHTTMIRGFCKVGMVASARKVFDEM---RCEPNMVTYNTLIHGFCKRG 245


>ref|XP_007012378.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508782741|gb|EOY29997.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 722

 Score =  104 bits (259), Expect = 1e-20
 Identities = 47/87 (54%), Positives = 61/87 (70%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDTVT+TT+IDGYCK+ E EEA K M++MV   C PNV+TYNA+I   CL G        
Sbjct: 261 PDTVTYTTLIDGYCKKGEFEEAMKYMDKMVKTGCLPNVLTYNAIIYALCLKGEVDEAKRM 320

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
               RL+G+++N ATH S+L+GLC+VG
Sbjct: 321 MSKMRLNGVEDNTATHMSILKGLCVVG 347


>ref|XP_006578089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 551

 Score =  103 bits (257), Expect = 3e-20
 Identities = 48/87 (55%), Positives = 61/87 (70%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PD V+FTT+IDGY KR   +EA +C++EMV + C PN VTYNAL+ G CLSG        
Sbjct: 262 PDVVSFTTLIDGYSKRGGFQEALECLKEMVERGCSPNAVTYNALVEGLCLSGEVDEARKM 321

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
               RL+GLK++VAT+ SLL+G CIVG
Sbjct: 322 MSRMRLNGLKDDVATNTSLLKGFCIVG 348



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSG 157
           PD  T+TT+I G+CK  ++E A K  +EM    CEPN+VTYN LI+GFC  G
Sbjct: 194 PDVYTYTTMIRGFCKVGKVESARKVFDEM---RCEPNIVTYNTLIHGFCKKG 242


>ref|XP_002308534.1| hypothetical protein POPTR_0006s23980g [Populus trichocarpa]
           gi|222854510|gb|EEE92057.1| hypothetical protein
           POPTR_0006s23980g [Populus trichocarpa]
          Length = 567

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 46/87 (52%), Positives = 60/87 (68%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDTVT++T+IDGYCK+ EL EA K M+ M+ + C PN+ TYNA+I G CL G        
Sbjct: 266 PDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRL 325

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
               RL+G+KENVATH S+L+GL + G
Sbjct: 326 LTKMRLNGVKENVATHLSILKGLSVAG 352



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMV-TQNCEPNVVTYNALINGFCLSGXXXXXXX 178
           P+ +T  T+I+GYCK+ ++E A   +  M+ +++C P+ VTY+ LI+G+C  G       
Sbjct: 230 PNLITCNTLINGYCKKGDMENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARK 289

Query: 179 XXXXXRLSGLKENVATHRSLLQGLCIVG 262
                 + G   N+ T+ +++ GLC+ G
Sbjct: 290 WMDGMLIRGCNPNLWTYNAIIYGLCLRG 317



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PD  T+TT+I G+CK   ++ A K  +EM+   CEPN++T N LING+C  G        
Sbjct: 198 PDASTYTTMIRGFCKVGMIDNARKVFDEMI---CEPNLITCNTLINGYCKKG--DMENAR 252

Query: 182 XXXXRLSGLKE---NVATHRSLLQGLCIVG 262
               R+   K+   +  T+ +L+ G C  G
Sbjct: 253 IFLCRMMESKDCLPDTVTYSTLIDGYCKKG 282


>ref|XP_006849607.1| hypothetical protein AMTR_s00024p00204830 [Amborella trichopoda]
           gi|548853182|gb|ERN11188.1| hypothetical protein
           AMTR_s00024p00204830 [Amborella trichopoda]
          Length = 550

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 45/86 (52%), Positives = 58/86 (67%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDT+TFTT+IDGYCK  EL  A K M+EM    CEPNV+TYN LING C++G        
Sbjct: 255 PDTITFTTLIDGYCKNGELGPAKKYMDEMEKHGCEPNVLTYNCLINGLCINGDISGAKKM 314

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIV 259
               RL+G+  ++AT+ SLL+G CI+
Sbjct: 315 MSRMRLNGIMADMATYTSLLKGFCIL 340



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVT-QNCEPNVVTYNALINGFCLSGXXXXXXX 178
           P+ +T+ T+I G+C++     A + +  MV  ++C P+ +T+  LI+G+C +G       
Sbjct: 219 PNVITYNTLISGFCRKGLPSAAVEILGLMVEDKDCSPDTITFTTLIDGYCKNGELGPAKK 278

Query: 179 XXXXXRLSGLKENVATHRSLLQGLCIVG 262
                   G + NV T+  L+ GLCI G
Sbjct: 279 YMDEMEKHGCEPNVLTYNCLINGLCING 306


>gb|EXB48288.1| hypothetical protein L484_003771 [Morus notabilis]
          Length = 563

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 43/87 (49%), Positives = 59/87 (67%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDTVT+TT+IDGY K+ E+ +A   ++EM  +  EPNV TYNALI+G CL G        
Sbjct: 256 PDTVTYTTLIDGYSKKGEVGKAINLLKEMEERGIEPNVFTYNALIHGLCLIGDLHEAKRM 315

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
               RL+G+K++V TH ++L+GLCI G
Sbjct: 316 ITEMRLNGIKDDVGTHTTILKGLCITG 342


>ref|XP_006368374.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550346285|gb|ERP64943.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 826

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 42/87 (48%), Positives = 52/87 (59%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PD  T++TIIDGY K+N+L  A K   +MV Q C+PNVVTY +LINGFC +G        
Sbjct: 553 PDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKT 612

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
               R SGLK NV T+  L+   C  G
Sbjct: 613 FEEMRSSGLKPNVVTYTILIGCFCKEG 639


>ref|XP_006303167.1| hypothetical protein CARUB_v10008555mg [Capsella rubella]
           gi|482571878|gb|EOA36065.1| hypothetical protein
           CARUB_v10008555mg [Capsella rubella]
          Length = 641

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 35/87 (40%), Positives = 57/87 (65%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+TVT++T+IDG+CK N L+EA++ ++ MV++ C+PN+VT+N +ING+C +         
Sbjct: 370 PNTVTYSTLIDGFCKENRLDEANQMLDLMVSKECDPNIVTFNIIINGYCKAKRVDDGFEL 429

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                + G+  N  T+ SL+QG C  G
Sbjct: 430 FRTMSMRGVVANTVTYGSLIQGFCQSG 456



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/83 (30%), Positives = 43/83 (51%)
 Frame = +2

Query: 5   DTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXXX 184
           + +T+T++I G+C      + +K + +M+T+   PNVVT+NALI+ F   G         
Sbjct: 301 NVITYTSLIGGFCNAGRWNDGAKLLRDMITRKITPNVVTFNALIDSFVKEGKLLEAEELH 360

Query: 185 XXXRLSGLKENVATHRSLLQGLC 253
                 G+  N  T+ +L+ G C
Sbjct: 361 KEMITRGISPNTVTYSTLIDGFC 383



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/84 (29%), Positives = 42/84 (50%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PD +T  T+++G C + ++ EA   ++ MV   C+P+ VTY  ++N  C SG        
Sbjct: 195 PDLITLNTLVNGLCLKGKVSEAVVLIDRMVENGCQPSEVTYGPVLNVLCKSGKTALAMEL 254

Query: 182 XXXXRLSGLKENVATHRSLLQGLC 253
                   +K N A +  ++ GLC
Sbjct: 255 LRKMEERDIKLNAAKYNIIIDGLC 278



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/84 (32%), Positives = 40/84 (47%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+ VTF  +ID + K  +L EA +  +EM+T+   PN VTY+ LI+GFC           
Sbjct: 335 PNVVTFNALIDSFVKEGKLLEAEELHKEMITRGISPNTVTYSTLIDGFCKENRLDEANQM 394

Query: 182 XXXXRLSGLKENVATHRSLLQGLC 253
                      N+ T   ++ G C
Sbjct: 395 LDLMVSKECDPNIVTFNIIINGYC 418



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 25/86 (29%), Positives = 47/86 (54%)
 Frame = +2

Query: 5   DTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXXX 184
           +TVT+ ++I G+C+  +LE A +  +EMV++   PN+VTY  L++G C +G         
Sbjct: 441 NTVTYGSLIQGFCQSGKLEVAKELFQEMVSRCVPPNIVTYKILLDGLCDNGELEKALEIF 500

Query: 185 XXXRLSGLKENVATHRSLLQGLCIVG 262
                S +  ++  +  ++ G+C  G
Sbjct: 501 EKIEKSKMDLDIGIYNIIIHGICNAG 526


>gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 33/87 (37%), Positives = 57/87 (65%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDT+T+T++IDG+CK N L++A++ ++ MV++ C+PN+ T+N LING+C +         
Sbjct: 464 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 523

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                L G+  +  T+ +L+QG C +G
Sbjct: 524 FRKMSLRGVVADTVTYNTLIQGFCELG 550



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/87 (32%), Positives = 46/87 (52%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+T+TF+T+I+G C    + EA + ++ MV    +P+++T N L+NG CLSG        
Sbjct: 254 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 313

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                  G + N  T+  +L  +C  G
Sbjct: 314 IDKMVEYGCQPNAVTYGPVLNVMCKSG 340



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/83 (30%), Positives = 46/83 (55%)
 Frame = +2

Query: 5   DTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXXX 184
           DTVT+ T+I G+C+  +L  A +  +EMV++   PN+VTY  L++G C +G         
Sbjct: 535 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 594

Query: 185 XXXRLSGLKENVATHRSLLQGLC 253
                S ++ ++  +  ++ G+C
Sbjct: 595 EKIEKSKMELDIGIYNIIIHGMC 617



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/84 (30%), Positives = 41/84 (48%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+ VTF+ +ID + K  +L EA +  +EM+ +   P+ +TY +LI+GFC           
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488

Query: 182 XXXXRLSGLKENVATHRSLLQGLC 253
                  G   N+ T   L+ G C
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYC 512


>ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
           gi|110741411|dbj|BAF02254.1| hypothetical protein
           [Arabidopsis thaliana] gi|332190743|gb|AEE28864.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 637

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 33/87 (37%), Positives = 57/87 (65%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDT+T+T++IDG+CK N L++A++ ++ MV++ C+PN+ T+N LING+C +         
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                L G+  +  T+ +L+QG C +G
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELG 452



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/87 (32%), Positives = 46/87 (52%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+T+TF+T+I+G C    + EA + ++ MV    +P+++T N L+NG CLSG        
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                  G + N  T+  +L  +C  G
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSG 242



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 25/83 (30%), Positives = 46/83 (55%)
 Frame = +2

Query: 5   DTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXXX 184
           DTVT+ T+I G+C+  +L  A +  +EMV++   PN+VTY  L++G C +G         
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496

Query: 185 XXXRLSGLKENVATHRSLLQGLC 253
                S ++ ++  +  ++ G+C
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMC 519



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/84 (30%), Positives = 41/84 (48%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+ VTF+ +ID + K  +L EA +  +EM+ +   P+ +TY +LI+GFC           
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390

Query: 182 XXXXRLSGLKENVATHRSLLQGLC 253
                  G   N+ T   L+ G C
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYC 414


>ref|XP_006303621.1| hypothetical protein CARUB_v10011428mg [Capsella rubella]
           gi|482572332|gb|EOA36519.1| hypothetical protein
           CARUB_v10011428mg [Capsella rubella]
          Length = 620

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 33/87 (37%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDT+T+ ++IDG+CK N L+EA++ ++ MV++ C+P++VT+N +ING+C +         
Sbjct: 349 PDTITYNSLIDGFCKENRLDEANQMLDLMVSKECDPDIVTFNIIINGYCKAKRVDDGFEI 408

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                + G+  N  T+ SL+QG C  G
Sbjct: 409 FRTMSMRGVVANTFTYSSLIQGFCQSG 435



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/87 (33%), Positives = 43/87 (49%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+ VTF+T+I+G C    + EA   ++ MV     PN++T N L+NG CL G        
Sbjct: 139 PNIVTFSTLINGLCLEGRVSEAVGFVDRMVEMGHTPNLITLNTLVNGLCLKGKVSEAIVL 198

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                 +G K +  T+  +L  LC  G
Sbjct: 199 IDQMVENGCKPDGVTYGPVLNVLCKSG 225


>gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 34/87 (39%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDTVT+T++IDG+CK N+L++A+  ++ MV++ C PN+ T+N LING+C +         
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                L G+  +  T+ +L+QG C +G
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELG 436



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/87 (34%), Positives = 48/87 (55%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDTVTF+T+I+G C    + EA + ++ MV    +P ++T NAL+NG CL+G        
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                 +G + N  T+  +L+ +C  G
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSG 226



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/83 (28%), Positives = 47/83 (56%)
 Frame = +2

Query: 5   DTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXXX 184
           DTVT+ T+I G+C+  +LE A +  +EMV++   P++V+Y  L++G C +G         
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480

Query: 185 XXXRLSGLKENVATHRSLLQGLC 253
                S ++ ++  +  ++ G+C
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMC 503



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/84 (32%), Positives = 40/84 (47%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PD V F+ +ID + K  +L EA +  +EM+ +   P+ VTY +LI+GFC           
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374

Query: 182 XXXXRLSGLKENVATHRSLLQGLC 253
                  G   N+ T   L+ G C
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYC 398


>ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g12620 gi|13605505|gb|AAK32746.1|AF361578_1
           At1g12620/T12C24_25 [Arabidopsis thaliana]
           gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25
           [Arabidopsis thaliana] gi|332190781|gb|AEE28902.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 621

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 34/87 (39%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDTVT+T++IDG+CK N+L++A+  ++ MV++ C PN+ T+N LING+C +         
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                L G+  +  T+ +L+QG C +G
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELG 436



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/87 (34%), Positives = 48/87 (55%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PDTVTF+T+I+G C    + EA + ++ MV    +P ++T NAL+NG CL+G        
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                 +G + N  T+  +L+ +C  G
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSG 226



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/83 (28%), Positives = 47/83 (56%)
 Frame = +2

Query: 5   DTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXXX 184
           DTVT+ T+I G+C+  +LE A +  +EMV++   P++V+Y  L++G C +G         
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480

Query: 185 XXXRLSGLKENVATHRSLLQGLC 253
                S ++ ++  +  ++ G+C
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMC 503



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/84 (32%), Positives = 40/84 (47%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PD V F+ +ID + K  +L EA +  +EM+ +   P+ VTY +LI+GFC           
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374

Query: 182 XXXXRLSGLKENVATHRSLLQGLC 253
                  G   N+ T   L+ G C
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYC 398


>ref|XP_007224062.1| hypothetical protein PRUPE_ppa015300mg, partial [Prunus persica]
           gi|462420998|gb|EMJ25261.1| hypothetical protein
           PRUPE_ppa015300mg, partial [Prunus persica]
          Length = 567

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 35/87 (40%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PD VT+ +++DGYCK ++++EA   M+E+  + C P++VT+N L+NGFC +G        
Sbjct: 8   PDIVTYNSLMDGYCKFSDIDEACLLMKEIRMRGCRPDLVTFNVLLNGFCNAGNWEVAFEL 67

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
               R S L  NV T+ +L++G+CI G
Sbjct: 68  LEKMRHSSLLPNVVTYNALIKGICIKG 94



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/82 (39%), Positives = 45/82 (54%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+   FT++IDGYCK   LE A + +E+M   +  PNVVTYNALI G C+ G        
Sbjct: 269 PNLFAFTSLIDGYCKAGNLEVAFELLEKMRQSSLLPNVVTYNALIKGLCMQGMSERADYL 328

Query: 182 XXXXRLSGLKENVATHRSLLQG 247
                  G++ N A + S++ G
Sbjct: 329 FSKMWEDGVEPNSAVYTSMIDG 350



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALING---FCLSGXXXXX 172
           PD VT+ ++IDGYCK  +++EA   M ++    C P++ T+N L NG   FC +G     
Sbjct: 196 PDIVTYNSLIDGYCKFCDIDEACLIMRKIRIGGCIPDLGTFNILFNGFYMFCKTGDLGLG 255

Query: 173 XXXXXXXRLSGLKENVATHRSLLQGLCIVG 262
                     G+  N+    SL+ G C  G
Sbjct: 256 YRVLGGMVKDGVLPNLFAFTSLIDGYCKAG 285


>ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
           gi|300160274|gb|EFJ26892.1| hypothetical protein
           SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 35/85 (41%), Positives = 53/85 (62%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PD VTFT ++DG CK + L+EA + +E M  +NC PNV+TY++LI+G C +G        
Sbjct: 334 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 393

Query: 182 XXXXRLSGLKENVATHRSLLQGLCI 256
                + G++ NV T+ SL+ G C+
Sbjct: 394 FKRMIVRGIEPNVVTYNSLIHGFCM 418



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 31/87 (35%), Positives = 49/87 (56%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PD VTF+T+++GYC    +++A + +EEMV  +C P+V TY +L++GFC  G        
Sbjct: 509 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRV 568

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                  G + NV T+ +L+   C  G
Sbjct: 569 LKRMAKRGCQPNVVTYTALIDAFCRAG 595



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 29/87 (33%), Positives = 52/87 (59%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+ +T++++IDG CK  ++ +A +  + M+ +  EPNVVTYN+LI+GFC++         
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 428

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                 +G   ++ T+ +L+ GLC  G
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLCKTG 455



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 30/87 (34%), Positives = 51/87 (58%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+ VT++T+I G+C++ +++ A K   +MV   C PN+VTYN L++G C +G        
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
               R  GL+ +  ++ +L+ GLC  G
Sbjct: 254 LDEMRERGLQPDKFSYDTLMAGLCKTG 280



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 33/87 (37%), Positives = 45/87 (51%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PD V ++T+I G CK   L+EA K  E+M   +CEP+VVT+ AL++G C           
Sbjct: 299 PDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQV 358

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                      NV T+ SL+ GLC  G
Sbjct: 359 LETMEDRNCTPNVITYSSLIDGLCKTG 385



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/83 (37%), Positives = 43/83 (51%)
 Frame = +2

Query: 5   DTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXXX 184
           + +T+T +IDG CK N L EA+    +M  +   PN  TYN LINGFC            
Sbjct: 125 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 184

Query: 185 XXXRLSGLKENVATHRSLLQGLC 253
              + SGL  NV T+ +++ G C
Sbjct: 185 KEMKESGLAPNVVTYSTVIHGFC 207



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSG-XXXXXXX 178
           P+ VT+T +ID +C+  +   A + +EEMV    +PNV+TY +LI GFC +G        
Sbjct: 579 PNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKI 638

Query: 179 XXXXXRLSGLKENVATHRSLLQGLCIVG 262
                R    K ++  +R ++ GLC  G
Sbjct: 639 LERLERDENCKADMFAYRVMMDGLCRTG 666



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/87 (32%), Positives = 43/87 (49%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           PD +T+ T+IDG CK     EA++   +M  + C P+V+TY+ LI GFC           
Sbjct: 439 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTL 498

Query: 182 XXXXRLSGLKENVATHRSLLQGLCIVG 262
                   +  +V T  +L++G C  G
Sbjct: 499 FDDMLKQAVLPDVVTFSTLVEGYCNAG 525



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/84 (32%), Positives = 44/84 (52%)
 Frame = +2

Query: 2   PDTVTFTTIIDGYCKRNELEEASKCMEEMVTQNCEPNVVTYNALINGFCLSGXXXXXXXX 181
           P+  T+  +I+G+CK +++  A   ++EM      PNVVTY+ +I+GFC           
Sbjct: 159 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 218

Query: 182 XXXXRLSGLKENVATHRSLLQGLC 253
                 +G   N+ T+ +LL GLC
Sbjct: 219 FRQMVENGCMPNLVTYNTLLSGLC 242