BLASTX nr result
ID: Cocculus22_contig00027039
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus22_contig00027039 (801 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu... 412 e-113 ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu... 409 e-112 gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus... 407 e-111 ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 400 e-109 gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 400 e-109 gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] 400 e-109 gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 399 e-109 dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 399 e-109 gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot... 395 e-108 ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 395 e-107 ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li... 395 e-107 emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 393 e-107 ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun... 392 e-107 emb|CBI21038.3| unnamed protein product [Vitis vinifera] 390 e-106 ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V... 390 e-106 ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Caps... 390 e-106 ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca... 389 e-106 gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis] 388 e-105 gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu... 385 e-104 ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis ... 384 e-104 >ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] Length = 1198 Score = 412 bits (1059), Expect = e-113 Identities = 200/265 (75%), Positives = 229/265 (86%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGR+Y+FLAFS NQLRD SAWFFAED NI V I+SWMG FT++N+AK AARMG C Sbjct: 498 GFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAKCAARMGQC 557 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYAT+EVP +EVNS LPDIKRNGYDFSDGIGMITPDLA EVAEKL+ +PP AYQI Sbjct: 558 FSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLAREVAEKLKFDFDPPCAYQI 617 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AGCKGV+ACWP +GDGIRLSLR SMNKF S H ILE+ SWTRFQPGFLNRQIITLLSA Sbjct: 618 RYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEICSWTRFQPGFLNRQIITLLSA 677 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 L+VPD VF +MQ+ MV KL+QML ++D+AF++LT SC+E+GN AA+ML+AGFKPQ+EPHL Sbjct: 678 LNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAEQGNVAAIMLSAGFKPQKEPHL 737 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 R ML+ VR AQL L EKARIFVPS Sbjct: 738 RGMLTCVRAAQLWGLREKARIFVPS 762 >ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] Length = 1200 Score = 409 bits (1051), Expect = e-112 Identities = 195/265 (73%), Positives = 228/265 (86%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGR+Y+FLAFS NQLRD SAWFF+E+ NI V D++SWMG FT+RN+AK AARMG C Sbjct: 501 GFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFTNRNIAKCAARMGQC 560 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYAT+EVP +EVNS LPDI+RNGY FSDGIG+ITPDLA EVAEKL+L +PP AYQI Sbjct: 561 FSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDPPCAYQI 620 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AGCKGV+ACWPGKGDG+RLSLR SMNKF S H LE+ SWTRFQPGFLNRQIITLLS Sbjct: 621 RYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLST 680 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 L+VPD VF +MQ++MV KL+QM N+D+AF++LT SC+++GN AA+ML+AGFKP REPHL Sbjct: 681 LNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAIMLSAGFKPDREPHL 740 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 R ML+ VR AQL DL EK RIFVPS Sbjct: 741 RGMLTCVRAAQLWDLREKTRIFVPS 765 >gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus] Length = 1196 Score = 407 bits (1045), Expect = e-111 Identities = 197/266 (74%), Positives = 233/266 (87%) Frame = +2 Query: 2 SGFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGL 181 SGF LCGRKY+FLAFS NQLRD SAWFFAED +I V++I++WMG FT+RNVAK AARMG Sbjct: 498 SGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKDIGVANIKNWMGRFTNRNVAKCAARMGQ 557 Query: 182 CFSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQ 361 CFSSTYATVEVP +VNSKLPDI+RN Y FSDGIGM++ DLAMEVAEKLQLT N PSAYQ Sbjct: 558 CFSSTYATVEVPSKQVNSKLPDIERNDYVFSDGIGMLSADLAMEVAEKLQLTTNLPSAYQ 617 Query: 362 IRFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLS 541 IR+AG KGV+ACWP + DG RLSLR+SM KF S H +LE+ SWTRFQPGFLNRQIITLLS Sbjct: 618 IRYAGYKGVVACWPAQSDGFRLSLRKSMKKFDSNHTVLEICSWTRFQPGFLNRQIITLLS 677 Query: 542 ALDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPH 721 AL+V D++F RMQ++M+ +L+QMLE+TD AF++LT SC+++GNTAA+ML+AGFKPQ EPH Sbjct: 678 ALEVGDEIFWRMQETMISRLNQMLEDTDTAFDVLTSSCTDQGNTAAIMLSAGFKPQTEPH 737 Query: 722 LRSMLSSVRVAQLTDLLEKARIFVPS 799 LR ML+S+RVAQL DL E+ARIFVPS Sbjct: 738 LRGMLTSIRVAQLGDLRERARIFVPS 763 >ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp. vesca] Length = 1197 Score = 400 bits (1028), Expect = e-109 Identities = 192/266 (72%), Positives = 224/266 (84%) Frame = +2 Query: 2 SGFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGL 181 +GF LCGRKY+FLAFS NQLRD SAWFFAED I + I++WMG FT+RNVAK AARMG Sbjct: 497 NGFHLCGRKYSFLAFSSNQLRDRSAWFFAEDKTISIQGIKNWMGRFTNRNVAKCAARMGQ 556 Query: 182 CFSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQ 361 CFSSTYATVEVP +VN +LPDI+RNGY FSDGIG ITPDLAMEVAEKL+L +PPSAYQ Sbjct: 557 CFSSTYATVEVPSTQVNHELPDIERNGYVFSDGIGRITPDLAMEVAEKLKLDRDPPSAYQ 616 Query: 362 IRFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLS 541 IR+ GCKGV+ACWP GDG RLSLR+SMNKF S H LE+ SWTR QPGFLNRQIITLLS Sbjct: 617 IRYGGCKGVVACWPSTGDGFRLSLRRSMNKFASDHTTLEICSWTRLQPGFLNRQIITLLS 676 Query: 542 ALDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPH 721 AL+VPD++F MQ++MV KL QML +TD+AF++LT SC+E+GN+AA+ML+AGFKPQ EPH Sbjct: 677 ALNVPDEIFWTMQETMVSKLKQMLVDTDVAFDVLTASCAEQGNSAAIMLSAGFKPQTEPH 736 Query: 722 LRSMLSSVRVAQLTDLLEKARIFVPS 799 LR ML+ ++ AQL L EK RIFVPS Sbjct: 737 LRGMLTCIQAAQLWGLREKTRIFVPS 762 >gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 400 bits (1028), Expect = e-109 Identities = 195/265 (73%), Positives = 223/265 (84%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRKY+FLAFS NQLRD SAWFFAED I+V I SWMG F++RNVAK AARMG C Sbjct: 498 GFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQC 557 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYATVEVP EVNS+LPDI+RNGY FSDGIGMI+ DLA+EVAEKL L+ NPPSAYQI Sbjct: 558 FSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQI 617 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AGCKGV+ACWP K DGIRLSLR SM KF S H ILE+ SWTRFQPGFLNRQI+TLLS+ Sbjct: 618 RYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSS 677 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 LDV D +F MQ M+ LD+ML ++D+AF+++T SC+E GNTAA+ML+AGFKPQ EPHL Sbjct: 678 LDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHL 737 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 R MLSS+R +QL DL KARIFVPS Sbjct: 738 RGMLSSIRASQLGDLRNKARIFVPS 762 >gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata] Length = 1197 Score = 400 bits (1027), Expect = e-109 Identities = 195/265 (73%), Positives = 223/265 (84%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRKY+FLAFS NQLRD SAWFFAED I+V I SWMG F++RNVAK AARMG C Sbjct: 498 GFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQC 557 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYATVEVP EVNS+LPDI+RNGY FSDGIGMI+ DLA+EVAEKL L+ NPPSAYQI Sbjct: 558 FSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAVEVAEKLHLSVNPPSAYQI 617 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AGCKGV+ACWP K DGIRLSLR SM KF S H ILE+ SWTRFQPGFLNRQI+TLLS+ Sbjct: 618 RYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSS 677 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 LDV D +F MQ M+ LD+ML ++D+AF+++T SC+E GNTAA+ML+AGFKPQ EPHL Sbjct: 678 LDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHL 737 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 R MLSS+R +QL DL KARIFVPS Sbjct: 738 RGMLSSIRASQLGDLRNKARIFVPS 762 >gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] Length = 1197 Score = 399 bits (1026), Expect = e-109 Identities = 194/265 (73%), Positives = 223/265 (84%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRKY+FLAFS NQLRD SAWFFAED I+V I SWMG F++RNVAK AARMG C Sbjct: 498 GFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQC 557 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYATVEVP EVNS+LPDI+RNGY FSDGIGMI+ DLA+EVAEKL L+ NPP+AYQI Sbjct: 558 FSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPAAYQI 617 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AGCKGV+ACWP K DGIRLSLR SM KF S H ILE+ SWTRFQPGFLNRQI+TLLS+ Sbjct: 618 RYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSS 677 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 LDV D +F MQ M+ LD+ML ++D+AF+++T SC+E GNTAA+ML+AGFKPQ EPHL Sbjct: 678 LDVKDGIFWEMQKEMIAGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHL 737 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 R MLSS+R +QL DL KARIFVPS Sbjct: 738 RGMLSSIRASQLGDLRNKARIFVPS 762 >dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 399 bits (1025), Expect = e-109 Identities = 195/265 (73%), Positives = 223/265 (84%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRKY+FLAFS NQLRD SAWFFAED I+V I SWMG F++RNVAK AARMG C Sbjct: 498 GFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQC 557 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYATVEVP EVNS+LPDI+RNGY FSDGIGMI+ DLA+EVAEKL L+ NPPSAYQI Sbjct: 558 FSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQI 617 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AGCKGV+ACWP K DGIRLSLR SM KF S H ILE+ SWTRFQPGFLNRQI+TLLS+ Sbjct: 618 RYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSS 677 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 LDV D +F MQ M+ LD+ML ++D+AF+++T SC+E GNTAA+ML+AGFKPQ EPHL Sbjct: 678 LDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHL 737 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 R MLSS+R +QL DL KARIFVPS Sbjct: 738 RGMLSSIRASQLGDLRNKARIFVPS 762 >gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana] Length = 1197 Score = 395 bits (1016), Expect = e-108 Identities = 193/265 (72%), Positives = 222/265 (83%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRKY+FLAFS NQLRD SAWFFAED I+V I SWMG F++RNVAK AARMG C Sbjct: 498 GFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQC 557 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYATVEVP EVNS+LPDI+RNGY FSDGIGMI+ DLA+EVAEKL L+ NPPSAYQI Sbjct: 558 FSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLALEVAEKLHLSVNPPSAYQI 617 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AGCKGV+ACWP K DGI LSLR SM KF S H ILE+ SWTRFQPGFLNRQI+TLLS+ Sbjct: 618 RYAGCKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSS 677 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 LDV D +F MQ M+ L++ML ++D+AF+++T SC+E GNTAA+ML+AGFKPQ EPHL Sbjct: 678 LDVKDGIFWEMQKEMISGLNKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHL 737 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 R MLSS+R +QL DL KARIFVPS Sbjct: 738 RGMLSSIRASQLGDLRNKARIFVPS 762 >ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus sinensis] Length = 1025 Score = 395 bits (1014), Expect = e-107 Identities = 192/266 (72%), Positives = 225/266 (84%), Gaps = 1/266 (0%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRK++FLAFS +QLRD SAWFF+ED V DI+ WMG FTD+N+AK AARMG C Sbjct: 498 GFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKTSVLDIKKWMGRFTDKNIAKCAARMGQC 557 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPS-AYQ 361 FSSTYATVEVP EV+ +LPDIKRNGY FSDGIG ITPDLAMEVA+KL+L NPP AYQ Sbjct: 558 FSSTYATVEVPPTEVDPELPDIKRNGYVFSDGIGKITPDLAMEVAQKLKLDVNPPPCAYQ 617 Query: 362 IRFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLS 541 IR+AGCKGV+ACWP KGDGIR+SLR+SMNKF S H LE+ SWTRFQPGFLNRQIITLLS Sbjct: 618 IRYAGCKGVVACWPAKGDGIRMSLRESMNKFQSHHTTLEICSWTRFQPGFLNRQIITLLS 677 Query: 542 ALDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPH 721 L+VPD++F MQDSM+ KL+QML ++D+AFE+LT +C+E+GNTAA+ML+AGF PQ EPH Sbjct: 678 TLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEVLTAACAEQGNTAAIMLSAGFNPQTEPH 737 Query: 722 LRSMLSSVRVAQLTDLLEKARIFVPS 799 LR ML+ +R AQL L EKARIFVP+ Sbjct: 738 LRGMLTCIRAAQLWGLREKARIFVPA 763 >ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Citrus sinensis] Length = 1197 Score = 395 bits (1014), Expect = e-107 Identities = 192/266 (72%), Positives = 225/266 (84%), Gaps = 1/266 (0%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRK++FLAFS +QLRD SAWFF+ED V DI+ WMG FTD+N+AK AARMG C Sbjct: 498 GFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKTSVLDIKKWMGRFTDKNIAKCAARMGQC 557 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPS-AYQ 361 FSSTYATVEVP EV+ +LPDIKRNGY FSDGIG ITPDLAMEVA+KL+L NPP AYQ Sbjct: 558 FSSTYATVEVPPTEVDPELPDIKRNGYVFSDGIGKITPDLAMEVAQKLKLDVNPPPCAYQ 617 Query: 362 IRFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLS 541 IR+AGCKGV+ACWP KGDGIR+SLR+SMNKF S H LE+ SWTRFQPGFLNRQIITLLS Sbjct: 618 IRYAGCKGVVACWPAKGDGIRMSLRESMNKFQSHHTTLEICSWTRFQPGFLNRQIITLLS 677 Query: 542 ALDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPH 721 L+VPD++F MQDSM+ KL+QML ++D+AFE+LT +C+E+GNTAA+ML+AGF PQ EPH Sbjct: 678 TLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEVLTAACAEQGNTAAIMLSAGFNPQTEPH 737 Query: 722 LRSMLSSVRVAQLTDLLEKARIFVPS 799 LR ML+ +R AQL L EKARIFVP+ Sbjct: 738 LRGMLTCIRAAQLWGLREKARIFVPA 763 >emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum] Length = 1197 Score = 393 bits (1009), Expect = e-107 Identities = 193/265 (72%), Positives = 220/265 (83%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRKY+FLAFS NQLRD SAWFFAED I+V I SWMG F++RNVAK AARMG C Sbjct: 498 GFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQC 557 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYATVEVP EVNS+LPDI+RNGY FSDGIGMI+ DLA+EVAEKL L NPPSAYQI Sbjct: 558 FSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLNVNPPSAYQI 617 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AG KGV+ACWP K DGI LSLR SM KF S H ILE+ SWTRFQPGFLNRQI+TLLS+ Sbjct: 618 RYAGYKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSS 677 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 LDV D +F MQ M+ LD+ML ++D+AF+++T SC+E GNTAA+ML+AGFKPQ EPHL Sbjct: 678 LDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHL 737 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 R MLSS+R +QL DL KARIFVPS Sbjct: 738 RGMLSSIRASQLGDLRNKARIFVPS 762 >ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica] gi|462422376|gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica] Length = 1196 Score = 392 bits (1007), Expect = e-107 Identities = 195/265 (73%), Positives = 219/265 (82%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRKYTFLAFS NQLRD SAWFFAE NI V I SWMG F ++NVAK AARMG C Sbjct: 497 GFYLCGRKYTFLAFSSNQLRDRSAWFFAECVNISVGKITSWMGKFNNKNVAKCAARMGQC 556 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYATVEV EVN +PDIKRNGY FSDGIGMITPDLA+EVAEKL+L NPP AYQI Sbjct: 557 FSSTYATVEVTSSEVND-IPDIKRNGYVFSDGIGMITPDLALEVAEKLKLDRNPPCAYQI 615 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 RFAGCKGV+ACWP KGDG RLSLR SMNKF S H LE+ SWTR+QPGFLNRQIITLLS Sbjct: 616 RFAGCKGVVACWPSKGDGFRLSLRTSMNKFESKHTTLEICSWTRYQPGFLNRQIITLLST 675 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 L+V D++F RMQ+ MV KL+QML +TD+AF++LT SC+E+GN AA+ML+AGFKPQ EPHL Sbjct: 676 LNVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTASCAEQGNAAAIMLSAGFKPQTEPHL 735 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 R ML+ ++ AQL L EKARIFV S Sbjct: 736 RGMLTCIQAAQLWGLREKARIFVHS 760 >emb|CBI21038.3| unnamed protein product [Vitis vinifera] Length = 1035 Score = 390 bits (1003), Expect = e-106 Identities = 194/265 (73%), Positives = 221/265 (83%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRKY+FLAFS NQLRD SAWFFAED V I+SWMG FT+RNVAK AARMG C Sbjct: 338 GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVAKCAARMGQC 397 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYATVEVP EV +LPDIKRNGYDFSDGIG I PDLAMEVAEKL+L P SAYQI Sbjct: 398 FSSTYATVEVPSWEVK-ELPDIKRNGYDFSDGIGKIVPDLAMEVAEKLKLEGTP-SAYQI 455 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AGCKGV+ACWP DGIRLS R SMNKF+S H ILE+ SWTRFQPGFLNRQI+TLLSA Sbjct: 456 RYAGCKGVVACWPSDNDGIRLSWRPSMNKFLSDHTILEICSWTRFQPGFLNRQIVTLLSA 515 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 L+VPD +F +MQ+SM+ KL+QML +TD+AF++L SC+E+GNTAA+ML+AGFKPQ EPHL Sbjct: 516 LNVPDKIFWKMQESMISKLNQMLTDTDVAFDVLIASCAEQGNTAAIMLSAGFKPQTEPHL 575 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 + ML+ +R AQ L EKARIFVPS Sbjct: 576 QGMLTCIRAAQFWGLREKARIFVPS 600 >ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera] Length = 1197 Score = 390 bits (1003), Expect = e-106 Identities = 194/265 (73%), Positives = 221/265 (83%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRKY+FLAFS NQLRD SAWFFAED V I+SWMG FT+RNVAK AARMG C Sbjct: 500 GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVAKCAARMGQC 559 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYATVEVP EV +LPDIKRNGYDFSDGIG I PDLAMEVAEKL+L P SAYQI Sbjct: 560 FSSTYATVEVPSWEVK-ELPDIKRNGYDFSDGIGKIVPDLAMEVAEKLKLEGTP-SAYQI 617 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AGCKGV+ACWP DGIRLS R SMNKF+S H ILE+ SWTRFQPGFLNRQI+TLLSA Sbjct: 618 RYAGCKGVVACWPSDNDGIRLSWRPSMNKFLSDHTILEICSWTRFQPGFLNRQIVTLLSA 677 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 L+VPD +F +MQ+SM+ KL+QML +TD+AF++L SC+E+GNTAA+ML+AGFKPQ EPHL Sbjct: 678 LNVPDKIFWKMQESMISKLNQMLTDTDVAFDVLIASCAEQGNTAAIMLSAGFKPQTEPHL 737 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 + ML+ +R AQ L EKARIFVPS Sbjct: 738 QGMLTCIRAAQFWGLREKARIFVPS 762 >ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Capsella rubella] gi|482559225|gb|EOA23416.1| hypothetical protein CARUB_v10016597mg [Capsella rubella] Length = 1197 Score = 390 bits (1002), Expect = e-106 Identities = 192/266 (72%), Positives = 228/266 (85%), Gaps = 1/266 (0%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRKY+FLAFS NQLRD SAWFFAED +VSDI++WMG F D+NVAK AARMGLC Sbjct: 496 GFMLCGRKYSFLAFSANQLRDSSAWFFAEDGKTRVSDIKTWMGKFKDKNVAKCAARMGLC 555 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTAN-PPSAYQ 361 FSSTYATV+V L EV+++LP+I+RNGY FSDGIG+ITPDLA EV EKL+L + P AYQ Sbjct: 556 FSSTYATVDVMLHEVDTELPEIERNGYVFSDGIGIITPDLADEVMEKLRLDVHCTPCAYQ 615 Query: 362 IRFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLS 541 IR+AG KGV+A WP KGDGIRL+LR SM KF S H ILE+ SWTRFQPGFLNRQIITLLS Sbjct: 616 IRYAGFKGVVARWPSKGDGIRLALRDSMKKFNSNHTILEICSWTRFQPGFLNRQIITLLS 675 Query: 542 ALDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPH 721 L VPD++F MQ+SM+CKL+++L++TD+AFE+LT SC+E+GNTAA+ML+AGFKP+ EPH Sbjct: 676 VLGVPDEIFWAMQESMLCKLNRILDDTDVAFEVLTASCAEQGNTAAIMLSAGFKPKTEPH 735 Query: 722 LRSMLSSVRVAQLTDLLEKARIFVPS 799 LR MLSSVR+AQL DL EK+RIFV S Sbjct: 736 LRGMLSSVRIAQLWDLREKSRIFVTS 761 >ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao] gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao] Length = 1197 Score = 389 bits (998), Expect = e-106 Identities = 192/265 (72%), Positives = 218/265 (82%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRKY+FLAFS NQLRD SAWFFAED V I WMG FT+RN+AK AARMG C Sbjct: 498 GFYLCGRKYSFLAFSANQLRDSSAWFFAEDGKTSVLQILRWMGKFTNRNIAKCAARMGQC 557 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYATVEVP EVN LPDI+RNGY FSDGIG ITPDLA EVA+KL+L NPP AYQI Sbjct: 558 FSSTYATVEVPSTEVNPFLPDIERNGYVFSDGIGKITPDLAKEVAQKLKLDLNPPCAYQI 617 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AGCKGV+ACWP +GDG+RLSLR SMNKF S H LE+ SWTRFQPGFLNRQIITLLS Sbjct: 618 RYAGCKGVVACWPEEGDGVRLSLRCSMNKFFSDHTTLEICSWTRFQPGFLNRQIITLLST 677 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 VPD+VF MQ++MV KL+++L +TD+AFE+LT SCSE+GN AA+ML+AGFKPQ EPHL Sbjct: 678 QYVPDEVFWEMQNTMVSKLNKILVDTDVAFEVLTSSCSEQGNAAAIMLSAGFKPQTEPHL 737 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 R +L+ VR +QL L EKARIFVPS Sbjct: 738 RGILTCVRASQLCGLREKARIFVPS 762 >gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis] Length = 1194 Score = 388 bits (996), Expect = e-105 Identities = 188/264 (71%), Positives = 220/264 (83%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCG++Y+FLAFS NQLRD SAWFFAED I V+ I+ WMG F +RN+AK AARMG C Sbjct: 494 GFYLCGQRYSFLAFSSNQLRDRSAWFFAEDGKITVNGIKKWMGRFNNRNIAKCAARMGQC 553 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYATVEVPL EVN L +I+RN Y FSDGIGMITPDLA EVAEKL+L NPPSAYQI Sbjct: 554 FSSTYATVEVPLTEVNFDLEEIERNTYVFSDGIGMITPDLAKEVAEKLKLDINPPSAYQI 613 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AGCKGV+ACWP KGDGIRLSLR+SMNKF S H ILE+ SWTRFQPGFLNRQI+TLLS Sbjct: 614 RYAGCKGVVACWPPKGDGIRLSLRRSMNKFDSKHTILEICSWTRFQPGFLNRQIVTLLST 673 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 L+V D++F +MQ++M+ KL+QML + D+AF +LT SC E+GN A+ML+AGFKPQ EPHL Sbjct: 674 LNVRDEIFWKMQETMLFKLNQMLTDADVAFNVLTASCPEQGNVGAIMLSAGFKPQSEPHL 733 Query: 725 RSMLSSVRVAQLTDLLEKARIFVP 796 + ML+ +R AQL L EKARIFVP Sbjct: 734 QGMLTCIRAAQLWGLREKARIFVP 757 >gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum] gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum] Length = 1196 Score = 385 bits (989), Expect = e-104 Identities = 190/265 (71%), Positives = 216/265 (81%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF LCGRKY+FLAFS NQLRD +AWFFAED I V I WMG FT+RN+AK AARMG C Sbjct: 497 GFYLCGRKYSFLAFSANQLRDRAAWFFAEDGKINVLQIIGWMGKFTNRNIAKCAARMGQC 556 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTANPPSAYQI 364 FSSTYATVEVP +VN LPDIKRNGYDFSDGIG ITPDLAMEVA+KL+L NPP AYQI Sbjct: 557 FSSTYATVEVPSGQVNMHLPDIKRNGYDFSDGIGKITPDLAMEVAQKLKLDLNPPCAYQI 616 Query: 365 RFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLSA 544 R+AGCKGV+ACWP +GD IRLSLR SM KF S H LE+ SWTRFQPGFLNRQIITLLS Sbjct: 617 RYAGCKGVVACWPEEGDRIRLSLRSSMIKFFSHHTTLEICSWTRFQPGFLNRQIITLLST 676 Query: 545 LDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPHL 724 L VPD+VF MQ+SMV KLD++L +TD AFE++ SC E+G+T A+ML+AGFKPQ EPHL Sbjct: 677 LGVPDEVFWGMQNSMVSKLDKVLVDTDAAFEVVISSCGEQGHTPAIMLSAGFKPQTEPHL 736 Query: 725 RSMLSSVRVAQLTDLLEKARIFVPS 799 R ML+ VR +QL L EK+RIF+ S Sbjct: 737 RGMLTCVRASQLWGLREKSRIFIHS 761 >ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata] gi|297323519|gb|EFH53940.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata] Length = 1197 Score = 384 bits (985), Expect = e-104 Identities = 191/266 (71%), Positives = 226/266 (84%), Gaps = 1/266 (0%) Frame = +2 Query: 5 GFRLCGRKYTFLAFSQNQLRDHSAWFFAEDDNIKVSDIRSWMGDFTDRNVAKYAARMGLC 184 GF+LCGRKY+FLAFS NQLRD SAWFFAED +VSDI++WMG F D+NVAK AARMGLC Sbjct: 496 GFKLCGRKYSFLAFSANQLRDSSAWFFAEDGKTRVSDIKAWMGKFKDKNVAKCAARMGLC 555 Query: 185 FSSTYATVEVPLDEVNSKLPDIKRNGYDFSDGIGMITPDLAMEVAEKLQLTAN-PPSAYQ 361 FSSTYATV+V +EVN++LPDI+RNGY FSDGIG ITPDLA EV EKL+L + P AYQ Sbjct: 556 FSSTYATVDVMPNEVNTELPDIERNGYVFSDGIGTITPDLADEVMEKLKLDLHCTPCAYQ 615 Query: 362 IRFAGCKGVIACWPGKGDGIRLSLRQSMNKFVSGHNILEVASWTRFQPGFLNRQIITLLS 541 IR+AG KGV+A WP KGDGIRL+LR SM KF S H ILE+ SWTRFQPGFLNRQIITLLS Sbjct: 616 IRYAGFKGVVARWPSKGDGIRLALRDSMKKFNSKHTILEICSWTRFQPGFLNRQIITLLS 675 Query: 542 ALDVPDDVFSRMQDSMVCKLDQMLENTDMAFEILTLSCSEEGNTAAMMLAAGFKPQREPH 721 L VPD++F MQ+SM+ KL+++L++TD+AFE+LT SC+E+GNTAA+ML+AGFKP+ EPH Sbjct: 676 VLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGNTAAIMLSAGFKPKTEPH 735 Query: 722 LRSMLSSVRVAQLTDLLEKARIFVPS 799 LR MLSSVR+AQL L EK+RIFV S Sbjct: 736 LRGMLSSVRIAQLWGLREKSRIFVTS 761