BLASTX nr result
ID: Cocculus22_contig00026980
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00026980
(458 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
emb|CBI17546.3| unnamed protein product [Vitis vinifera] 95 9e-18
emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera] 95 9e-18
ref|XP_007046988.1| Tetratricopeptide repeat (TPR)-like superfam... 89 5e-16
ref|XP_002310210.2| pentatricopeptide repeat-containing family p... 86 4e-15
gb|EXB59125.1| hypothetical protein L484_014620 [Morus notabilis] 86 7e-15
ref|XP_006425713.1| hypothetical protein CICLE_v10025762mg [Citr... 86 7e-15
ref|XP_002866998.1| pentatricopeptide repeat-containing protein ... 83 5e-14
emb|CAA05629.1| membrane-associated salt-inducible protein like ... 82 6e-14
ref|NP_195386.1| pentatricopeptide repeat-containing protein [Ar... 82 6e-14
ref|XP_006282615.1| hypothetical protein CARUB_v10004839mg, part... 82 1e-13
ref|XP_007202370.1| hypothetical protein PRUPE_ppa009261mg [Prun... 82 1e-13
ref|XP_006383229.1| pentatricopeptide repeat-containing family p... 81 2e-13
ref|XP_006411973.1| hypothetical protein EUTSA_v10027579mg [Eutr... 80 2e-13
ref|XP_004232380.1| PREDICTED: pentatricopeptide repeat-containi... 79 7e-13
gb|ABU45207.1| unknown [Solanum bulbocastanum] 79 9e-13
gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata] 78 1e-12
ref|XP_004300620.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_006363148.1| PREDICTED: pentatricopeptide repeat-containi... 76 6e-12
gb|AAG01123.1|AF273333_8 BAC19.8 [Solanum lycopersicum] 76 6e-12
>ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Vitis vinifera]
Length = 414
Score = 95.1 bits (235), Expect = 9e-18
Identities = 46/71 (64%), Positives = 55/71 (77%)
Frame = -1
Query: 458 AKRDKIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEE 279
A R KIPDFGT+R LV GLV+KKK K+AKG+IRTVKK FP NFLN W+KLE +LGL +
Sbjct: 342 AFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTVKKNFPANFLNVWRKLEEDLGLAGVD 401
Query: 278 QSPEEEDVAKA 246
SP +DV +A
Sbjct: 402 SSPAADDVQEA 412
>emb|CBI17546.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 95.1 bits (235), Expect = 9e-18
Identities = 46/71 (64%), Positives = 55/71 (77%)
Frame = -1
Query: 458 AKRDKIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEE 279
A R KIPDFGT+R LV GLV+KKK K+AKG+IRTVKK FP NFLN W+KLE +LGL +
Sbjct: 299 AFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTVKKNFPANFLNVWRKLEEDLGLAGVD 358
Query: 278 QSPEEEDVAKA 246
SP +DV +A
Sbjct: 359 SSPAADDVQEA 369
>emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
Length = 416
Score = 95.1 bits (235), Expect = 9e-18
Identities = 46/71 (64%), Positives = 55/71 (77%)
Frame = -1
Query: 458 AKRDKIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEE 279
A R KIPDFGT+R LV GLV+KKK K+AKG+IRTVKK FP NFLN W+KLE +LGL +
Sbjct: 344 AFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTVKKNFPANFLNVWRKLEEDLGLAGVD 403
Query: 278 QSPEEEDVAKA 246
SP +DV +A
Sbjct: 404 SSPAADDVQEA 414
>ref|XP_007046988.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508699249|gb|EOX91145.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 411
Score = 89.4 bits (220), Expect = 5e-16
Identities = 45/68 (66%), Positives = 51/68 (75%)
Frame = -1
Query: 446 KIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEEQSPE 267
KIPDF T++ LV GLV+ KK+K+AKG+IRTVKKKFP NFLNAWKKLE ELGLV
Sbjct: 342 KIPDFNTLKHLVEGLVKNKKIKEAKGLIRTVKKKFPPNFLNAWKKLEEELGLVSGNAGGG 401
Query: 266 EEDVAKAA 243
E AK A
Sbjct: 402 EAQEAKEA 409
>ref|XP_002310210.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550334733|gb|EEE90660.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 396
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/66 (60%), Positives = 52/66 (78%)
Frame = -1
Query: 455 KRDKIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEEQ 276
K +IPDF T++ LV GLVEKKK+K+AKG+IRT+KKKFP+N LNAWKK+E LGL E+
Sbjct: 328 KVHRIPDFNTLKYLVKGLVEKKKIKEAKGLIRTMKKKFPLNLLNAWKKVEENLGLHSTEE 387
Query: 275 SPEEED 258
E ++
Sbjct: 388 DKEVKE 393
>gb|EXB59125.1| hypothetical protein L484_014620 [Morus notabilis]
Length = 400
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/70 (57%), Positives = 55/70 (78%), Gaps = 2/70 (2%)
Frame = -1
Query: 446 KIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLV--KEEQS 273
KIPDF T+++LV GLV+KKK+++A+G++RT+KKKFP N LN+WKK+E LGL +EQS
Sbjct: 331 KIPDFNTIKILVEGLVKKKKIREARGMLRTIKKKFPANVLNSWKKVEESLGLASDSDEQS 390
Query: 272 PEEEDVAKAA 243
+ED AA
Sbjct: 391 AGDEDKEAAA 400
>ref|XP_006425713.1| hypothetical protein CICLE_v10025762mg [Citrus clementina]
gi|568824774|ref|XP_006466769.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Citrus sinensis]
gi|557527703|gb|ESR38953.1| hypothetical protein
CICLE_v10025762mg [Citrus clementina]
Length = 403
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = -1
Query: 446 KIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLV 288
KIPDF T++LLV GLV+KKK+K+AKGVIRT+KKKFP N L AWKK+E ELGLV
Sbjct: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLV 390
>ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312834|gb|EFH43257.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 411
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = -1
Query: 446 KIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGL 291
KIPDF T++ L GLVEKKK+ DAKG+IRTVKKKFP +F+NAWKKLE ELGL
Sbjct: 344 KIPDFNTLKHLAVGLVEKKKIDDAKGLIRTVKKKFPPSFMNAWKKLEEELGL 395
>emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
Length = 428
Score = 82.4 bits (202), Expect = 6e-14
Identities = 45/69 (65%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -1
Query: 446 KIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLV-KEEQSP 270
KIPDF T++ LV GLVE KK DAKG+IRTVKKKFP +FLNAWKKLE ELGL K + P
Sbjct: 360 KIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGLYSKTDAFP 419
Query: 269 EEEDVAKAA 243
A AA
Sbjct: 420 SSAKEAAAA 428
>ref|NP_195386.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181418|sp|Q9M065.1|PP352_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g36680, mitochondrial; Flags: Precursor
gi|2464912|emb|CAB16807.1| salt-inducible like protein
[Arabidopsis thaliana] gi|7270616|emb|CAB80334.1|
salt-inducible like protein [Arabidopsis thaliana]
gi|17381286|gb|AAL36061.1| C7A10_680/C7A10_680
[Arabidopsis thaliana] gi|24111267|gb|AAN46757.1|
At4g36680/C7A10_680 [Arabidopsis thaliana]
gi|332661286|gb|AEE86686.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 412
Score = 82.4 bits (202), Expect = 6e-14
Identities = 45/69 (65%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -1
Query: 446 KIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLV-KEEQSP 270
KIPDF T++ LV GLVE KK DAKG+IRTVKKKFP +FLNAWKKLE ELGL K + P
Sbjct: 344 KIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGLYSKTDAFP 403
Query: 269 EEEDVAKAA 243
A AA
Sbjct: 404 SSAKEAAAA 412
>ref|XP_006282615.1| hypothetical protein CARUB_v10004839mg, partial [Capsella rubella]
gi|482551320|gb|EOA15513.1| hypothetical protein
CARUB_v10004839mg, partial [Capsella rubella]
Length = 435
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = -1
Query: 449 DKIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEEQSP 270
+KIPDF T++ L +GLV KK+ DAKG+IRTVKKKFP +F+NAWKKLE ELGL + +
Sbjct: 370 NKIPDFNTLKHLAAGLVANKKIDDAKGLIRTVKKKFPPSFMNAWKKLEEELGLDSKTDAS 429
Query: 269 EEEDVA 252
+E A
Sbjct: 430 AKEAAA 435
>ref|XP_007202370.1| hypothetical protein PRUPE_ppa009261mg [Prunus persica]
gi|462397901|gb|EMJ03569.1| hypothetical protein
PRUPE_ppa009261mg [Prunus persica]
Length = 299
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/71 (60%), Positives = 52/71 (73%), Gaps = 3/71 (4%)
Frame = -1
Query: 446 KIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEEQ--- 276
KIPDF TMR LV GLV+KKK+K+AKG+IRT+KKKFP N L AWKK+E LGL ++
Sbjct: 227 KIPDFNTMRHLVEGLVKKKKMKEAKGLIRTIKKKFPPNLLVAWKKVEEGLGLASSDRNAS 286
Query: 275 SPEEEDVAKAA 243
S + D AK A
Sbjct: 287 SVPDNDEAKEA 297
>ref|XP_006383229.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550338811|gb|ERP61026.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 397
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = -1
Query: 446 KIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEEQSPE 267
+IPDF T++ L GL EKKK+K+AKG+IRT+KKKFP N LNAWKK+E LGL E+ E
Sbjct: 332 RIPDFNTLKYLAEGLAEKKKMKEAKGLIRTMKKKFPPNLLNAWKKVEESLGLHSTEEDKE 391
Query: 266 EED 258
++
Sbjct: 392 VKE 394
>ref|XP_006411973.1| hypothetical protein EUTSA_v10027579mg [Eutrema salsugineum]
gi|557113143|gb|ESQ53426.1| hypothetical protein
EUTSA_v10027579mg [Eutrema salsugineum]
Length = 410
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = -1
Query: 446 KIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKE 282
KIPDF T++ LV GLV KK+ DAKG+IRTVKKKFP +FLNAWKKLE E+GL+ +
Sbjct: 348 KIPDFNTLQHLVVGLVRNKKIDDAKGLIRTVKKKFPPSFLNAWKKLEEEVGLLSK 402
>ref|XP_004232380.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Solanum lycopersicum]
Length = 405
Score = 79.0 bits (193), Expect = 7e-13
Identities = 39/59 (66%), Positives = 44/59 (74%)
Frame = -1
Query: 455 KRDKIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEE 279
K KIPDF T+ LV GLV+K K+KDAKG+ RTVKKKFP N + AW KLE ELGL K E
Sbjct: 340 KVQKIPDFDTLTYLVEGLVKKSKLKDAKGMSRTVKKKFPPNLVKAWTKLEKELGLAKAE 398
>gb|ABU45207.1| unknown [Solanum bulbocastanum]
Length = 405
Score = 78.6 bits (192), Expect = 9e-13
Identities = 37/59 (62%), Positives = 44/59 (74%)
Frame = -1
Query: 455 KRDKIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEE 279
K KIPDF T++ LV GL +K K+KDAKG+ RTVKKKFP N + AW K+E ELGL K E
Sbjct: 340 KVQKIPDFDTLKYLVEGLAKKSKLKDAKGMCRTVKKKFPPNLIKAWTKIEEELGLAKAE 398
>gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/57 (63%), Positives = 46/57 (80%)
Frame = -1
Query: 449 DKIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEE 279
+K+PDF T++ LV GLV+++K+KDAKG+ RTVKKKFP N + AW KLE ELGL K E
Sbjct: 340 NKMPDFNTLKCLVEGLVKREKLKDAKGMSRTVKKKFPPNLVKAWAKLEEELGLAKVE 396
>ref|XP_004300620.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 461
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = -1
Query: 446 KIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEE 279
KIPDF T+R L GL++K K+AKG+IRTVKKKFP N LNAWKK+E LGLV +E
Sbjct: 335 KIPDFNTLRFLAEGLMKKNMRKEAKGLIRTVKKKFPPNVLNAWKKVEEGLGLVPDE 390
>ref|XP_006363148.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Solanum tuberosum]
Length = 406
Score = 75.9 bits (185), Expect = 6e-12
Identities = 37/59 (62%), Positives = 43/59 (72%)
Frame = -1
Query: 455 KRDKIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVKEE 279
K KIPDF T++ LV GLV+K +KDAKG+ RTVKKKFP N + W KLE ELGL K E
Sbjct: 341 KVQKIPDFNTLKYLVEGLVKKSMLKDAKGMSRTVKKKFPPNLVKDWTKLEEELGLAKAE 399
>gb|AAG01123.1|AF273333_8 BAC19.8 [Solanum lycopersicum]
Length = 167
Score = 75.9 bits (185), Expect = 6e-12
Identities = 37/57 (64%), Positives = 43/57 (75%)
Frame = -1
Query: 455 KRDKIPDFGTMRLLVSGLVEKKKVKDAKGVIRTVKKKFPVNFLNAWKKLEIELGLVK 285
K KIPDF T+ LV GLV+K K+KDAKG+ RTVKKKFP N + AW KLE ELGL +
Sbjct: 104 KVQKIPDFDTLTYLVEGLVKKSKLKDAKGMSRTVKKKFPPNLVKAWTKLEEELGLAE 160