BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00026783
         (427 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   194   8e-48
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         194   1e-47
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   194   1e-47
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   194   1e-47
gb|AAX14649.1| gag-pol polyprotein [Setaria pumila]                   193   2e-47
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc...   193   2e-47
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni...   193   2e-47
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   193   2e-47
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun...   191   7e-47
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   191   7e-47
gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex]                190   2e-46
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   190   2e-46
ref|XP_007023626.1| Uncharacterized protein TCM_046829 [Theobrom...   189   3e-46
ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, par...   189   3e-46
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     189   3e-46
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g...   189   3e-46
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|...   189   3e-46
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni...   189   4e-46
ref|XP_007212569.1| hypothetical protein PRUPE_ppa015570mg, part...   188   8e-46
gb|AAM74412.1|AC120497_12 Putative retroelement [Oryza sativa Ja...   188   8e-46

>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  194 bits (494), Expect = 8e-48
 Identities = 88/144 (61%), Positives = 111/144 (77%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2    LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
            LCIP  S+RL ++ E HG G   HFG KKT ++++  FFWP MR+D+ ++V  C  CQ+A
Sbjct: 1185 LCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKA 1244

Query: 173  KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
            K      GLY+PLP+P  PW D++MDF+LGLPRT+RG DSIFVVVDRFSKMAHFI C KT
Sbjct: 1245 KSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKT 1304

Query: 353  MDATHIACLYFKEVVRLHGVPNSI 424
             DA+HIA L+F+E+VRLHGVPN+I
Sbjct: 1305 DDASHIADLFFREIVRLHGVPNTI 1328



 Score =  117 bits (292), Expect = 2e-24
 Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 5/146 (3%)
 Frame = +2

Query: 2    LCIPDC-SLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQR 169
            +C+PD   L+  I+ E H      H G  K +  + + ++W SM+++I ++V +C +CQR
Sbjct: 2005 VCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQR 2064

Query: 170  AKGTTSN-AGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACR 346
             K      AGL  PL +P+  W ++ MDFI GLP+TQ G DSI+VVVDR +K+A FI  +
Sbjct: 2065 VKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVK 2124

Query: 347  KTMDATHIACLYFKEVVRLHGVPNSI 424
             T     +A LYF  +V LHGVP  I
Sbjct: 2125 TTYGGNKLAELYFARIVSLHGVPKKI 2150


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  194 bits (493), Expect = 1e-47
 Identities = 89/144 (61%), Positives = 112/144 (77%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2    LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
            LCIP  S+RL ++ E HG G   HFG KKT ++++  FFWP MR+D+ + V  C  CQ+A
Sbjct: 1188 LCIPASSVRLLLLQEAHGGGLMGHFGAKKTEDILAGHFFWPKMRRDVVRLVARCTTCQKA 1247

Query: 173  KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
            K   +  GLYLPLP+P APW D++MDF+LGLPRT++G DS+FVVVDRFSKMAHFI C KT
Sbjct: 1248 KSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTRKGRDSVFVVVDRFSKMAHFIPCHKT 1307

Query: 353  MDATHIACLYFKEVVRLHGVPNSI 424
             DATHIA L+F+E+VRLHGVPN+I
Sbjct: 1308 DDATHIADLFFREIVRLHGVPNTI 1331


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  194 bits (492), Expect = 1e-47
 Identities = 90/144 (62%), Positives = 108/144 (75%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2    LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
            LC+P  SLR  +I ELHG G   HFG+ KT  LV   FFWPS++KD+ K +  C  CQ  
Sbjct: 1091 LCLPRTSLRDHVIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWKVIKQCRACQVG 1150

Query: 173  KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
            KG+  N GLY PLP+P  PW D++MDF+LGLPRTQRG DSIFVVVDRFSKMAHFI C+K 
Sbjct: 1151 KGSKQNTGLYTPLPVPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIPCKKA 1210

Query: 353  MDATHIACLYFKEVVRLHGVPNSI 424
             DA+++A L+FKEVVRLHG+P SI
Sbjct: 1211 SDASYVAALFFKEVVRLHGLPQSI 1234


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  194 bits (492), Expect = 1e-47
 Identities = 90/144 (62%), Positives = 108/144 (75%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2    LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
            LC+P  SLR  +I ELHG G   HFG+ KT  LV   FFWPS++KD+ K +  C  CQ  
Sbjct: 962  LCLPRTSLRDHVIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWKVIKQCRACQVG 1021

Query: 173  KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
            KG+  N GLY PLP+P  PW D++MDF+LGLPRTQRG DSIFVVVDRFSKMAHFI C+K 
Sbjct: 1022 KGSKQNTGLYTPLPVPSKPWEDLSMDFVLGLPRTQRGFDSIFVVVDRFSKMAHFIPCKKA 1081

Query: 353  MDATHIACLYFKEVVRLHGVPNSI 424
             DA+++A L+FKEVVRLHG+P SI
Sbjct: 1082 SDASYVAALFFKEVVRLHGLPQSI 1105


>gb|AAX14649.1| gag-pol polyprotein [Setaria pumila]
          Length = 185

 Score =  193 bits (490), Expect = 2e-47
 Identities = 87/144 (60%), Positives = 112/144 (77%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
           LCIP  S+RL ++ E HG G   HFG KKT ++++  FFWP MR+D+ ++V  C  CQ+A
Sbjct: 1   LCIPASSVRLLLLQEAHGGGLMGHFGVKKTEDILAGHFFWPKMRRDVKRFVARCTTCQKA 60

Query: 173 KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
           K   +  GLYLPLP+P APW D++MDF++GLPRT++G DS+FVVVDRFSKMAHFI C KT
Sbjct: 61  KSRLNPHGLYLPLPVPSAPWEDISMDFVMGLPRTRKGRDSVFVVVDRFSKMAHFIPCHKT 120

Query: 353 MDATHIACLYFKEVVRLHGVPNSI 424
            DA HIA L+F+E+VRLHGVPN+I
Sbjct: 121 DDAPHIADLFFREIVRLHGVPNTI 144


>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 889

 Score =  193 bits (490), Expect = 2e-47
 Identities = 85/144 (59%), Positives = 113/144 (78%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
           LCIP  S+R+ ++ E HG G   HFG KKT ++++  FFWP MR+D++++V  C  CQ+A
Sbjct: 526 LCIPASSVRMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKA 585

Query: 173 KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
           K   +  GLY+PLP+P  PW D++MDF+LGLPRT++G DSIFVVVDRFSKMAHFI C K+
Sbjct: 586 KSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 645

Query: 353 MDATHIACLYFKEVVRLHGVPNSI 424
            DATH+A L+F+E+VRLHGVPN+I
Sbjct: 646 DDATHVADLFFREIVRLHGVPNTI 669


>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  193 bits (490), Expect = 2e-47
 Identities = 87/144 (60%), Positives = 110/144 (76%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2    LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
            LCIP  S+RL ++ E HG G   HFG KKT ++++  FFWP MR+D+ ++V  C  CQ+A
Sbjct: 1164 LCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKA 1223

Query: 173  KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
            K      GLY+PLP+P  PW D++MDF+LGLPRT+RG DSIFVVVDRFSKM HFI C KT
Sbjct: 1224 KSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMVHFIPCHKT 1283

Query: 353  MDATHIACLYFKEVVRLHGVPNSI 424
             DA+HIA L+F+E+VRLHGVPN+I
Sbjct: 1284 DDASHIADLFFREIVRLHGVPNTI 1307


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  193 bits (490), Expect = 2e-47
 Identities = 85/144 (59%), Positives = 113/144 (78%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2    LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
            LCIP  S+R+ ++ E HG G   HFG KKT ++++  FFWP MR+D++++V  C  CQ+A
Sbjct: 1213 LCIPASSVRMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKA 1272

Query: 173  KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
            K   +  GLY+PLP+P  PW D++MDF+LGLPRT++G DSIFVVVDRFSKMAHFI C K+
Sbjct: 1273 KSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 1332

Query: 353  MDATHIACLYFKEVVRLHGVPNSI 424
             DATH+A L+F+E+VRLHGVPN+I
Sbjct: 1333 DDATHVADLFFREIVRLHGVPNTI 1356


>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
            gi|462405925|gb|EMJ11389.1| hypothetical protein
            PRUPE_ppa017790mg [Prunus persica]
          Length = 1485

 Score =  191 bits (486), Expect = 7e-47
 Identities = 88/145 (60%), Positives = 110/145 (75%), Gaps = 3/145 (2%)
 Frame = +2

Query: 2    LCIPDCSLRLQIINELHG---EGHFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
            LCIP  SLR ++I +LHG    GH G+ KT   + + F+WP +++D+   V  CY CQ +
Sbjct: 1092 LCIPVSSLREKLIRDLHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTIVRKCYTCQTS 1151

Query: 173  KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
            KG   N GLY+PLP+P   W D+ MDF+LGLPRTQRG+DS+FVVVDRFSKMAHFIACRKT
Sbjct: 1152 KGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQRGVDSVFVVVDRFSKMAHFIACRKT 1211

Query: 353  MDATHIACLYFKEVVRLHGVPNSIT 427
             DA++IA L+F+EVVRLHGVP SIT
Sbjct: 1212 ADASNIAKLFFREVVRLHGVPTSIT 1236


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  191 bits (486), Expect = 7e-47
 Identities = 85/144 (59%), Positives = 113/144 (78%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2    LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
            LCIP  S+R+ ++ E HG G   HFG KKT ++++  FFWP MR+D++++V  C  CQ+A
Sbjct: 1213 LCIPASSVRMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKMRRDVERFVARCTTCQKA 1272

Query: 173  KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
            K   +  GLY+PLP+P  PW D++MDF+LGLPRT++G DSIFVVVDRFSKMAHFI C K+
Sbjct: 1273 KLRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 1332

Query: 353  MDATHIACLYFKEVVRLHGVPNSI 424
             DATH+A L+F+E+VRLHGVPN+I
Sbjct: 1333 DDATHVADLFFREIVRLHGVPNTI 1356


>gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex]
          Length = 227

 Score =  190 bits (482), Expect = 2e-46
 Identities = 85/144 (59%), Positives = 112/144 (77%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
           LCIP  S+RL ++ E HG G   HFG KKT ++++  FFWP MR+D++++V  C  CQ+A
Sbjct: 1   LCIPASSVRLLLLQEAHGGGLMGHFGAKKTEDILASHFFWPKMRRDVERFVARCTTCQKA 60

Query: 173 KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
           K   +  GLY+PLP+P  PW D++MDF+LGLPRT++G DSIFVVVDRFSKMAHFI C K+
Sbjct: 61  KSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 120

Query: 353 MDATHIACLYFKEVVRLHGVPNSI 424
            DAT+IA L+F+EV+RLHGVP +I
Sbjct: 121 DDATNIADLFFREVIRLHGVPTTI 144


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  190 bits (482), Expect = 2e-46
 Identities = 84/144 (58%), Positives = 112/144 (77%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2    LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
            LCIP  S+RL ++ E HG G   HFG KKT ++++  FFWP MR+D++++V  C  CQRA
Sbjct: 1229 LCIPASSVRLLLLQEAHGGGLMGHFGVKKTEDILATHFFWPKMRRDVERFVARCTTCQRA 1288

Query: 173  KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
            K   +  GLY+PLP+P  PW D++MDF+LGLPRT++G DSIFVVVDRFSKMAHFI C K+
Sbjct: 1289 KSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 1348

Query: 353  MDATHIACLYFKEVVRLHGVPNSI 424
             DA ++A L+F+E++RLHGVPN+I
Sbjct: 1349 DDAVNVADLFFREIIRLHGVPNTI 1372


>ref|XP_007023626.1| Uncharacterized protein TCM_046829 [Theobroma cacao]
           gi|508778992|gb|EOY26248.1| Uncharacterized protein
           TCM_046829 [Theobroma cacao]
          Length = 672

 Score =  189 bits (480), Expect = 3e-46
 Identities = 87/144 (60%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
           LCIP+ SLR QII ELHG G   HFG+ KT  +V+  ++WP MR+D+++ V  C  C   
Sbjct: 280 LCIPEGSLREQIIRELHGNGLGGHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPACLFG 339

Query: 173 KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
           KG+  N GLY+PLP P APW  ++MDF+LGLP+T +G DSIFVVVDRFSKMAHFI C +T
Sbjct: 340 KGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKGFDSIFVVVDRFSKMAHFIPCFRT 399

Query: 353 MDATHIACLYFKEVVRLHGVPNSI 424
            DATHIA L+F+E+VRLHG+P SI
Sbjct: 400 SDATHIAELFFREIVRLHGIPTSI 423


>ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
           gi|508702149|gb|EOX94045.1| DNA/RNA polymerases
           superfamily protein, partial [Theobroma cacao]
          Length = 624

 Score =  189 bits (480), Expect = 3e-46
 Identities = 87/144 (60%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
           LCIP+ SLR QII ELHG G   HFG+ KT  +V+  ++WP MR+D+++ V  C  C   
Sbjct: 461 LCIPEGSLREQIIRELHGNGLGGHFGRDKTLAMVADRYYWPKMRRDVERLVKRCPACLFG 520

Query: 173 KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
           KG+  N GLY+PLP P APW  ++MDF+LGLP+T +G DSIFVVVDRFSKMAHFI C +T
Sbjct: 521 KGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKGFDSIFVVVDRFSKMAHFIPCFRT 580

Query: 353 MDATHIACLYFKEVVRLHGVPNSI 424
            DATHIA L+F+E+VRLHG+P SI
Sbjct: 581 SDATHIAELFFREIVRLHGIPTSI 604


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  189 bits (480), Expect = 3e-46
 Identities = 82/144 (56%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2    LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
            LC+P CS+RL ++ E H  G   HFG +KT+++++  F+WP MR+D+ + V  C  C +A
Sbjct: 1188 LCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKA 1247

Query: 173  KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
            K   +  GLY PLP+P APW D++MDF+LGLPRT+RG DSIFVVVDRFSKMAHFI C K+
Sbjct: 1248 KSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKS 1307

Query: 353  MDATHIACLYFKEVVRLHGVPNSI 424
             DA+HIA L+F E+VRLHG+P +I
Sbjct: 1308 DDASHIASLFFSEIVRLHGMPKTI 1331


>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
           gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
           Japonica Group]
          Length = 681

 Score =  189 bits (480), Expect = 3e-46
 Identities = 82/144 (56%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
           LC+P CS+RL ++ E H  G   HFG +KT+++++  F+WP MR+D+ + V  C  C +A
Sbjct: 156 LCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKA 215

Query: 173 KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
           K   +  GLY PLP+P APW D++MDF+LGLPRT+RG DSIFVVVDRFSKMAHFI C K+
Sbjct: 216 KSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKS 275

Query: 353 MDATHIACLYFKEVVRLHGVPNSI 424
            DA+HIA L+F E+VRLHG+P +I
Sbjct: 276 DDASHIASLFFSEIVRLHGMPKTI 299


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 681

 Score =  189 bits (480), Expect = 3e-46
 Identities = 82/144 (56%), Positives = 109/144 (75%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
           LC+P CS+RL ++ E H  G   HFG +KT+++++  F+WP MR+D+ + V  C  C +A
Sbjct: 156 LCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCVTCHKA 215

Query: 173 KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
           K   +  GLY PLP+P APW D++MDF+LGLPRT+RG DSIFVVVDRFSKMAHFI C K+
Sbjct: 216 KSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKS 275

Query: 353 MDATHIACLYFKEVVRLHGVPNSI 424
            DA+HIA L+F E+VRLHG+P +I
Sbjct: 276 DDASHIASLFFSEIVRLHGMPKTI 299


>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  189 bits (479), Expect = 4e-46
 Identities = 83/144 (57%), Positives = 111/144 (77%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2    LCIPDCSLRLQIINELHGEG---HFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
            LCIP  S+ + ++ E HG G   HFG KKT ++++   FWP MR+D++++V  C  CQ+A
Sbjct: 1109 LCIPASSVHMLLLQEAHGGGLMGHFGVKKTEDILADHLFWPKMRRDVERFVARCTTCQKA 1168

Query: 173  KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
            K   +  GLY+PLP+P  PW D++MDF+LGLPRT++G DSIFVVVDRFSKMAHFI C K+
Sbjct: 1169 KSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKS 1228

Query: 353  MDATHIACLYFKEVVRLHGVPNSI 424
             DATH+A L+F+E+VRLHGVPN+I
Sbjct: 1229 DDATHVADLFFREIVRLHGVPNTI 1252


>ref|XP_007212569.1| hypothetical protein PRUPE_ppa015570mg, partial [Prunus persica]
           gi|462408434|gb|EMJ13768.1| hypothetical protein
           PRUPE_ppa015570mg, partial [Prunus persica]
          Length = 541

 Score =  188 bits (477), Expect = 8e-46
 Identities = 86/145 (59%), Positives = 110/145 (75%), Gaps = 3/145 (2%)
 Frame = +2

Query: 2   LCIPDCSLRLQIINELHG---EGHFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
           LCIP  SLR ++I +LHG    GH G  KT   + ++F+WP +++D+   V  CY CQ +
Sbjct: 199 LCIPVSSLREKLIRDLHGGGLSGHLGCDKTIAGMEETFYWPQLKRDVGTIVRKCYTCQTS 258

Query: 173 KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
           KG   N GLY+PLP+P   W D+ MDF+LGLPRTQRG+DS+FVVVDRFSKMAHFIAC+KT
Sbjct: 259 KGQVQNTGLYVPLPVPNDIWQDLAMDFVLGLPRTQRGVDSVFVVVDRFSKMAHFIACKKT 318

Query: 353 MDATHIACLYFKEVVRLHGVPNSIT 427
            DA++IA L+F+EVVRLHG+P SIT
Sbjct: 319 DDASNIAKLFFREVVRLHGIPTSIT 343


>gb|AAM74412.1|AC120497_12 Putative retroelement [Oryza sativa Japonica Group]
          Length = 540

 Score =  188 bits (477), Expect = 8e-46
 Identities = 86/144 (59%), Positives = 111/144 (77%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   LCIPDCSLRLQIINELHG---EGHFGQKKTFELVSKSFFWPSMRKDIDKYVNMCYICQRA 172
           LCIP  S+RL +I E HG    GHFG KKT ++++  FFWP MRKDI+++V  C  CQ+A
Sbjct: 108 LCIPVGSVRLLLIQEAHGGGLTGHFGAKKTEDVLAMHFFWPRMRKDIERFVARCTTCQKA 167

Query: 173 KGTTSNAGLYLPLPIPKAPWTDVTMDFILGLPRTQRGMDSIFVVVDRFSKMAHFIACRKT 352
           K   +  GLY+PLP+P  PW D++MDF+LGLPRT+RG DSIFVVVDRFSKMAHFI C K+
Sbjct: 168 KSRLNPHGLYMPLPVPSIPWADISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKS 227

Query: 353 MDATHIACLYFKEVVRLHGVPNSI 424
            DA HIA ++F ++VRLHG+P++I
Sbjct: 228 DDAVHIADMFFHKIVRLHGMPSTI 251