BLASTX nr result
ID: Cocculus22_contig00026742
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00026742
(340 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006359638.1| PREDICTED: ribosome biogenesis protein WDR12... 155 7e-36
ref|XP_004232168.1| PREDICTED: ribosome biogenesis protein WDR12... 155 7e-36
ref|XP_006338371.1| PREDICTED: ribosome biogenesis protein WDR12... 152 4e-35
ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12... 152 4e-35
emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera] 152 4e-35
ref|XP_004230897.1| PREDICTED: ribosome biogenesis protein WDR12... 147 1e-33
gb|EXB38097.1| Ribosome biogenesis protein WDR12-like protein [M... 147 1e-33
ref|XP_004149101.1| PREDICTED: ribosome biogenesis protein WDR12... 135 4e-30
ref|XP_004168778.1| PREDICTED: ribosome biogenesis protein WDR12... 133 3e-29
gb|EYU34608.1| hypothetical protein MIMGU_mgv1a017726mg [Mimulus... 132 6e-29
ref|XP_006482744.1| PREDICTED: ribosome biogenesis protein WDR12... 131 8e-29
ref|XP_006431288.1| hypothetical protein CICLE_v10011739mg [Citr... 131 8e-29
ref|XP_006431287.1| hypothetical protein CICLE_v10011739mg [Citr... 131 8e-29
ref|XP_007032734.1| Transducin/WD40 repeat-like superfamily prot... 130 2e-28
ref|XP_002324109.2| hypothetical protein POPTR_0017s12880g [Popu... 128 7e-28
ref|NP_974784.1| WD-40 repeat family protein [Arabidopsis thalia... 124 2e-26
ref|NP_197059.1| WD-40 repeat family protein [Arabidopsis thalia... 124 2e-26
ref|XP_004489459.1| PREDICTED: ribosome biogenesis protein WDR12... 123 2e-26
ref|XP_002526121.1| WD-repeat protein, putative [Ricinus communi... 123 3e-26
ref|XP_006287791.1| hypothetical protein CARUB_v10001003mg [Caps... 122 4e-26
>ref|XP_006359638.1| PREDICTED: ribosome biogenesis protein WDR12 homolog isoform X1
[Solanum tuberosum] gi|565387726|ref|XP_006359639.1|
PREDICTED: ribosome biogenesis protein WDR12 homolog
isoform X2 [Solanum tuberosum]
Length = 440
Score = 155 bits (391), Expect = 7e-36
Identities = 79/95 (83%), Positives = 85/95 (89%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
M++NG EEA+RRVQVRFVTKL+SP KAPPTSIAIPSNLTR GLS +VNNLLKA DW
Sbjct: 4 MDINGQVEEAARRVQVRFVTKLKSPFKAPPTSIAIPSNLTRLGLSSIVNNLLKAGKDDWN 63
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
P+PFDFLID ELVRMSLEEFLLAKGISAEKILEIE
Sbjct: 64 PEPFDFLIDGELVRMSLEEFLLAKGISAEKILEIE 98
>ref|XP_004232168.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Solanum
lycopersicum]
Length = 441
Score = 155 bits (391), Expect = 7e-36
Identities = 78/95 (82%), Positives = 86/95 (90%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
M+++G EEA+RRVQVRFVTKL++P KAPPTSIAIPSNLTR GLS +VNNLLKA N DW
Sbjct: 4 MDIDGNVEEAARRVQVRFVTKLKAPFKAPPTSIAIPSNLTRLGLSSIVNNLLKAGNDDWN 63
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
P+PFDFLID ELVRMSLEEFLLAKGISAEKILEIE
Sbjct: 64 PEPFDFLIDGELVRMSLEEFLLAKGISAEKILEIE 98
>ref|XP_006338371.1| PREDICTED: ribosome biogenesis protein WDR12 homolog isoform X1
[Solanum tuberosum] gi|565342478|ref|XP_006338372.1|
PREDICTED: ribosome biogenesis protein WDR12 homolog
isoform X2 [Solanum tuberosum]
Length = 440
Score = 152 bits (385), Expect = 4e-35
Identities = 77/95 (81%), Positives = 85/95 (89%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
M+++G EEA+RRVQVRFVTKL++P KAPPTSIAIPSNLTR GLS +VNNLLKA DW
Sbjct: 4 MDIDGNVEEAARRVQVRFVTKLKAPFKAPPTSIAIPSNLTRLGLSSIVNNLLKAGKDDWN 63
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
P+PFDFLID ELVRMSLEEFLLAKGISAEKILEIE
Sbjct: 64 PEPFDFLIDGELVRMSLEEFLLAKGISAEKILEIE 98
>ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Vitis
vinifera] gi|296082215|emb|CBI21220.3| unnamed protein
product [Vitis vinifera]
Length = 438
Score = 152 bits (385), Expect = 4e-35
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
ME++G EE SRRVQVRF TKLQSP K PPTSIAIPSNLTR GLS +VNNLLK+ N DW+
Sbjct: 1 MEIDGDVEETSRRVQVRFTTKLQSPFKTPPTSIAIPSNLTRMGLSAIVNNLLKSGNPDWK 60
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
P+PFDFLID ELVRMSLE+FL+AKGISAEKILEIE
Sbjct: 61 PEPFDFLIDGELVRMSLEQFLIAKGISAEKILEIE 95
>emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]
Length = 427
Score = 152 bits (385), Expect = 4e-35
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
ME++G EE SRRVQVRF TKLQSP K PPTSIAIPSNLTR GLS +VNNLLK+ N DW+
Sbjct: 1 MEIDGDVEETSRRVQVRFTTKLQSPFKTPPTSIAIPSNLTRMGLSAIVNNLLKSGNPDWK 60
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
P+PFDFLID ELVRMSLE+FL+AKGISAEKILEIE
Sbjct: 61 PEPFDFLIDGELVRMSLEQFLIAKGISAEKILEIE 95
>ref|XP_004230897.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Solanum
lycopersicum]
Length = 434
Score = 147 bits (372), Expect = 1e-33
Identities = 76/95 (80%), Positives = 82/95 (86%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
M+ NG EEA+RRVQVRFVTKL+ P KAPPTSIAIPSNLTR GLS + NNLLKA +W
Sbjct: 1 MDNNGQVEEAARRVQVRFVTKLKPPFKAPPTSIAIPSNLTRLGLSSIANNLLKAGKDNWN 60
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
P+PFDFLID ELVRMSLEEFLLAKGISAEKILEIE
Sbjct: 61 PEPFDFLIDGELVRMSLEEFLLAKGISAEKILEIE 95
>gb|EXB38097.1| Ribosome biogenesis protein WDR12-like protein [Morus notabilis]
Length = 434
Score = 147 bits (371), Expect = 1e-33
Identities = 73/95 (76%), Positives = 83/95 (87%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
M++NG +E SRR+Q RFVTKL PLKAP TSIAIPS+LTR GLS +VNNLL+A N DWE
Sbjct: 1 MDVNGDADETSRRIQARFVTKLDPPLKAPATSIAIPSSLTRLGLSTIVNNLLQAGNPDWE 60
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
P+PFDFLID ELVRMSLE+FLLAKGISAEK+LEIE
Sbjct: 61 PEPFDFLIDGELVRMSLEQFLLAKGISAEKVLEIE 95
>ref|XP_004149101.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Cucumis
sativus]
Length = 434
Score = 135 bits (341), Expect = 4e-30
Identities = 69/95 (72%), Positives = 79/95 (83%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
M+++G E+ SRRVQVRF+TKL +P K P +IAIPSNLTR GLS VVNNLL A N +WE
Sbjct: 1 MDIDGDFEDTSRRVQVRFITKLIAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
+PFDFLID ELVRMSLE+FLLAKGISAEK LEIE
Sbjct: 61 EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIE 95
>ref|XP_004168778.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Cucumis
sativus]
Length = 434
Score = 133 bits (334), Expect = 3e-29
Identities = 68/95 (71%), Positives = 78/95 (82%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
M+++G E+ SRRVQVRF+TKL +P K P +IAIPSNLTR GLS VVNNLL A N +WE
Sbjct: 1 MDIDGDFEDTSRRVQVRFITKLIAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
+PFDFLID ELVRMSLE+FLLAKGISA K LEIE
Sbjct: 61 EEPFDFLIDGELVRMSLEKFLLAKGISAGKTLEIE 95
>gb|EYU34608.1| hypothetical protein MIMGU_mgv1a017726mg [Mimulus guttatus]
Length = 448
Score = 132 bits (331), Expect = 6e-29
Identities = 67/99 (67%), Positives = 81/99 (81%), Gaps = 4/99 (4%)
Frame = -1
Query: 286 MELNGGD----EEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVN 119
M+++GGD EE +R+VQVRFVTKL+ P K P +SI+IP+ LTR+GLS +VNNLL AVN
Sbjct: 1 MDVDGGDGAAAEEFTRQVQVRFVTKLKPPYKTPQSSISIPAKLTRRGLSTIVNNLLLAVN 60
Query: 118 SDWEPQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
DW+ +PFDFLID ELVRM L+EFLL KGISAEK LEIE
Sbjct: 61 GDWQSEPFDFLIDGELVRMPLQEFLLVKGISAEKTLEIE 99
>ref|XP_006482744.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Citrus
sinensis]
Length = 440
Score = 131 bits (330), Expect = 8e-29
Identities = 67/89 (75%), Positives = 77/89 (86%)
Frame = -1
Query: 268 DEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWEPQPFDF 89
+EE SRRVQVRF TKL+ P K P SIAIPSNLTR GLS VVNNLL+AVN +W+ +PFDF
Sbjct: 12 NEENSRRVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDF 71
Query: 88 LIDDELVRMSLEEFLLAKGISAEKILEIE 2
L++ ELVRMSLE+FLLAKGISAEK+LEIE
Sbjct: 72 LVNGELVRMSLEQFLLAKGISAEKVLEIE 100
>ref|XP_006431288.1| hypothetical protein CICLE_v10011739mg [Citrus clementina]
gi|557533345|gb|ESR44528.1| hypothetical protein
CICLE_v10011739mg [Citrus clementina]
Length = 440
Score = 131 bits (330), Expect = 8e-29
Identities = 67/89 (75%), Positives = 77/89 (86%)
Frame = -1
Query: 268 DEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWEPQPFDF 89
+EE SRRVQVRF TKL+ P K P SIAIPSNLTR GLS +VNNLL+AVN +W+ +PFDF
Sbjct: 12 NEENSRRVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSIVNNLLQAVNPEWKSEPFDF 71
Query: 88 LIDDELVRMSLEEFLLAKGISAEKILEIE 2
LI+ ELVRMSLE+FLLAKGISAEK+LEIE
Sbjct: 72 LINGELVRMSLEQFLLAKGISAEKVLEIE 100
>ref|XP_006431287.1| hypothetical protein CICLE_v10011739mg [Citrus clementina]
gi|557533344|gb|ESR44527.1| hypothetical protein
CICLE_v10011739mg [Citrus clementina]
Length = 428
Score = 131 bits (330), Expect = 8e-29
Identities = 67/89 (75%), Positives = 77/89 (86%)
Frame = -1
Query: 268 DEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWEPQPFDF 89
+EE SRRVQVRF TKL+ P K P SIAIPSNLTR GLS +VNNLL+AVN +W+ +PFDF
Sbjct: 12 NEENSRRVQVRFKTKLKPPQKVPSNSIAIPSNLTRFGLSSIVNNLLQAVNPEWKSEPFDF 71
Query: 88 LIDDELVRMSLEEFLLAKGISAEKILEIE 2
LI+ ELVRMSLE+FLLAKGISAEK+LEIE
Sbjct: 72 LINGELVRMSLEQFLLAKGISAEKVLEIE 100
>ref|XP_007032734.1| Transducin/WD40 repeat-like superfamily protein isoform 1
[Theobroma cacao] gi|590650808|ref|XP_007032735.1|
Transducin/WD40 repeat-like superfamily protein isoform
1 [Theobroma cacao] gi|508711763|gb|EOY03660.1|
Transducin/WD40 repeat-like superfamily protein isoform
1 [Theobroma cacao] gi|508711764|gb|EOY03661.1|
Transducin/WD40 repeat-like superfamily protein isoform
1 [Theobroma cacao]
Length = 436
Score = 130 bits (326), Expect = 2e-28
Identities = 67/96 (69%), Positives = 84/96 (87%), Gaps = 1/96 (1%)
Frame = -1
Query: 286 MELNGG-DEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDW 110
ME++G +E+ SRR+QVRFVTKL++P K P T+IAIPS+L+R GLS +VN LL+AV S+W
Sbjct: 1 MEIDGDTNEDNSRRIQVRFVTKLKAPYKVPTTAIAIPSDLSRLGLSSIVNKLLQAVVSEW 60
Query: 109 EPQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
+ +PFDFLI+ ELVRMSLE+FLLAKGISAEKILEIE
Sbjct: 61 KTEPFDFLINGELVRMSLEQFLLAKGISAEKILEIE 96
>ref|XP_002324109.2| hypothetical protein POPTR_0017s12880g [Populus trichocarpa]
gi|550320162|gb|EEF04242.2| hypothetical protein
POPTR_0017s12880g [Populus trichocarpa]
Length = 437
Score = 128 bits (322), Expect = 7e-28
Identities = 66/95 (69%), Positives = 79/95 (83%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
M+++ EE RRVQVRF+TKL+ P K P TSIAIP+NLTR GLS +VN+LLKA + +WE
Sbjct: 5 MDMDSDVEE--RRVQVRFITKLKPPFKVPNTSIAIPANLTRLGLSTIVNSLLKAGDDEWE 62
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
QPFDFLID ELVR+ LE+FLLAKGISAEK+LEIE
Sbjct: 63 SQPFDFLIDGELVRLPLEQFLLAKGISAEKVLEIE 97
>ref|NP_974784.1| WD-40 repeat family protein [Arabidopsis thaliana]
gi|332004794|gb|AED92177.1| WD-40 repeat family protein
[Arabidopsis thaliana]
Length = 402
Score = 124 bits (310), Expect = 2e-26
Identities = 60/95 (63%), Positives = 79/95 (83%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
M+++G E+ SRR+ V+FVTKL SP K P S+AIPSN+TR GLS +VN+++++ N +W+
Sbjct: 1 MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 58
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
+PFDFLID EL+RMSLEEFLLAKGISAE+ LEIE
Sbjct: 59 TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIE 93
>ref|NP_197059.1| WD-40 repeat family protein [Arabidopsis thaliana]
gi|9755810|emb|CAC01754.1| putative protein [Arabidopsis
thaliana] gi|17381110|gb|AAL36367.1| unknown protein
[Arabidopsis thaliana] gi|20258961|gb|AAM14196.1|
unknown protein [Arabidopsis thaliana]
gi|332004793|gb|AED92176.1| WD-40 repeat family protein
[Arabidopsis thaliana]
Length = 433
Score = 124 bits (310), Expect = 2e-26
Identities = 60/95 (63%), Positives = 79/95 (83%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
M+++G E+ SRR+ V+FVTKL SP K P S+AIPSN+TR GLS +VN+++++ N +W+
Sbjct: 1 MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 58
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
+PFDFLID EL+RMSLEEFLLAKGISAE+ LEIE
Sbjct: 59 TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIE 93
>ref|XP_004489459.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Cicer
arietinum]
Length = 439
Score = 123 bits (309), Expect = 2e-26
Identities = 63/97 (64%), Positives = 77/97 (79%)
Frame = -1
Query: 292 LAMELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSD 113
L E N E ++RR+QVRF+TKL P K P ++IAIP++LTR GLS +VN LL++ D
Sbjct: 4 LVGEENADGEASTRRIQVRFITKLSEPFKVPSSAIAIPADLTRFGLSSLVNALLQSKYDD 63
Query: 112 WEPQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
+EP+PFDFLID E VRMSLEEFLLAKGISAE+ILEIE
Sbjct: 64 YEPEPFDFLIDGEFVRMSLEEFLLAKGISAERILEIE 100
>ref|XP_002526121.1| WD-repeat protein, putative [Ricinus communis]
gi|223534618|gb|EEF36315.1| WD-repeat protein, putative
[Ricinus communis]
Length = 401
Score = 123 bits (308), Expect = 3e-26
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = -1
Query: 265 EEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWEPQPFDFL 86
E R++Q RFVTKL++P +AP +I IPSNLTR GLS +VN+LLKA N +WE PFDFL
Sbjct: 4 ETEERQIQARFVTKLKAPYRAPSATITIPSNLTRLGLSTIVNSLLKAGNPEWENCPFDFL 63
Query: 85 IDDELVRMSLEEFLLAKGISAEKILEIE 2
ID EL+R+SLE+FLLAKGISAEKILEIE
Sbjct: 64 IDGELIRLSLEQFLLAKGISAEKILEIE 91
>ref|XP_006287791.1| hypothetical protein CARUB_v10001003mg [Capsella rubella]
gi|482556497|gb|EOA20689.1| hypothetical protein
CARUB_v10001003mg [Capsella rubella]
Length = 433
Score = 122 bits (307), Expect = 4e-26
Identities = 60/95 (63%), Positives = 78/95 (82%)
Frame = -1
Query: 286 MELNGGDEEASRRVQVRFVTKLQSPLKAPPTSIAIPSNLTRKGLSLVVNNLLKAVNSDWE 107
M++ G E+ SRR+ V+FVTKL SP K P S+AIPSN+TR GLS +VN+++++ N +W+
Sbjct: 1 MDVEG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESDNPEWK 58
Query: 106 PQPFDFLIDDELVRMSLEEFLLAKGISAEKILEIE 2
+PFDFLID EL+RMSLEEFLLAKGISAE+ LEIE
Sbjct: 59 TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIE 93