BLASTX nr result
ID: Cocculus22_contig00026657
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00026657
(381 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006853102.1| hypothetical protein AMTR_s00038p00125360 [A... 143 2e-32
ref|NP_001049993.1| Os03g0326600 [Oryza sativa Japonica Group] g... 143 3e-32
ref|XP_006650019.1| PREDICTED: RNA-binding protein 40-like [Oryz... 142 4e-32
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu... 141 1e-31
ref|XP_007030223.1| RNA-binding family protein isoform 6 [Theobr... 139 3e-31
ref|XP_007030221.1| RNA-binding family protein isoform 4 [Theobr... 139 3e-31
ref|XP_007030218.1| RNA-binding family protein isoform 1 [Theobr... 139 3e-31
ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citr... 139 4e-31
ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti... 136 3e-30
ref|XP_003624600.1| RNA-binding protein [Medicago truncatula] gi... 134 1e-29
ref|XP_004984515.1| PREDICTED: RNA-binding protein 40-like [Seta... 132 4e-29
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 132 4e-29
emb|CBI36673.3| unnamed protein product [Vitis vinifera] 132 4e-29
ref|XP_006417594.1| hypothetical protein EUTSA_v10007645mg [Eutr... 130 2e-28
ref|XP_004493140.1| PREDICTED: RNA-binding protein 40-like isofo... 130 3e-28
ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isofo... 130 3e-28
ref|XP_002892494.1| RNA recognition motif-containing protein [Ar... 130 3e-28
ref|XP_002465331.1| hypothetical protein SORBIDRAFT_01g036600 [S... 130 3e-28
ref|XP_003565980.1| PREDICTED: RNA-binding protein 40-like [Brac... 129 3e-28
dbj|BAH57015.1| AT1G09230 [Arabidopsis thaliana] 129 3e-28
>ref|XP_006853102.1| hypothetical protein AMTR_s00038p00125360 [Amborella trichopoda]
gi|548856741|gb|ERN14569.1| hypothetical protein
AMTR_s00038p00125360 [Amborella trichopoda]
Length = 471
Score = 143 bits (361), Expect = 2e-32
Identities = 73/90 (81%), Positives = 78/90 (86%)
Frame = -1
Query: 291 EWAAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQAQS 112
E ATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRN AFVDFK++ LASQAQS
Sbjct: 22 EEKTATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNAAFVDFKDDVLASQAQS 81
Query: 111 QLNRLRFLGKVLSVERAGKPSAKNKNQDEE 22
QLNRLRFLGKVLSVERA + K++ EE
Sbjct: 82 QLNRLRFLGKVLSVERASTLAINKKHRTEE 111
>ref|NP_001049993.1| Os03g0326600 [Oryza sativa Japonica Group]
gi|108707928|gb|ABF95723.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113548464|dbj|BAF11907.1| Os03g0326600 [Oryza sativa
Japonica Group] gi|218192743|gb|EEC75170.1| hypothetical
protein OsI_11395 [Oryza sativa Indica Group]
Length = 467
Score = 143 bits (360), Expect = 3e-32
Identities = 69/94 (73%), Positives = 82/94 (87%)
Frame = -1
Query: 282 AATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQAQSQLN 103
AATLLVRHLPEAIP E LSRLFSHYGA+SVRPCAGG+LRNCAFVDF++E +ASQAQS LN
Sbjct: 42 AATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEVVASQAQSLLN 101
Query: 102 RLRFLGKVLSVERAGKPSAKNKNQDEETQYRKGS 1
RLRFLGKVL VERA +P++KN N+ ++ +G+
Sbjct: 102 RLRFLGKVLIVERANQPNSKNANEKQQEHEAQGA 135
>ref|XP_006650019.1| PREDICTED: RNA-binding protein 40-like [Oryza brachyantha]
Length = 460
Score = 142 bits (359), Expect = 4e-32
Identities = 70/95 (73%), Positives = 81/95 (85%)
Frame = -1
Query: 285 AAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQAQSQL 106
AAATLLVRHLPEAIP E LSRLFSHYGA+SVRPCAGG+LRNCAFVDF++E ASQAQS L
Sbjct: 34 AAATLLVRHLPEAIPQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEVAASQAQSLL 93
Query: 105 NRLRFLGKVLSVERAGKPSAKNKNQDEETQYRKGS 1
NRLRFLGKVL VERA +P++KN ++ + Q G+
Sbjct: 94 NRLRFLGKVLIVERANQPNSKNSSEKQHEQAAHGT 128
>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
gi|223535277|gb|EEF36954.1| RNA binding protein,
putative [Ricinus communis]
Length = 450
Score = 141 bits (355), Expect = 1e-31
Identities = 73/100 (73%), Positives = 79/100 (79%), Gaps = 2/100 (2%)
Frame = -1
Query: 300 EEEEWAAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQ 121
E E A +TLL+RHLPEAIPHETLSRLFSHYGA+SVRPCAGGRL NCAFVDFKNEALA Q
Sbjct: 2 EVESAAVSTLLIRHLPEAIPHETLSRLFSHYGATSVRPCAGGRLTNCAFVDFKNEALAYQ 61
Query: 120 AQSQLNRLRFLGKVLSVERA--GKPSAKNKNQDEETQYRK 7
AQ QLN LRFLGKVL+ E+A KP+ N E Q RK
Sbjct: 62 AQRQLNGLRFLGKVLAAEKANNNKPNENNVLTQSEAQIRK 101
>ref|XP_007030223.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508718828|gb|EOY10725.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 436
Score = 139 bits (351), Expect = 3e-31
Identities = 69/90 (76%), Positives = 75/90 (83%)
Frame = -1
Query: 285 AAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQAQSQL 106
+ TLL+RHLPEAIPH+TL RLFSHYGASSVRPC+ G+LRNCAFVDFKNEALASQAQ QL
Sbjct: 35 SVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLRNCAFVDFKNEALASQAQRQL 94
Query: 105 NRLRFLGKVLSVERAGKPSAKNKNQDEETQ 16
N LRFLGKVLSVERA K + NK Q Q
Sbjct: 95 NGLRFLGKVLSVERASKTTEDNKPQQTGVQ 124
>ref|XP_007030221.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508718826|gb|EOY10723.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 487
Score = 139 bits (351), Expect = 3e-31
Identities = 69/90 (76%), Positives = 75/90 (83%)
Frame = -1
Query: 285 AAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQAQSQL 106
+ TLL+RHLPEAIPH+TL RLFSHYGASSVRPC+ G+LRNCAFVDFKNEALASQAQ QL
Sbjct: 35 SVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLRNCAFVDFKNEALASQAQRQL 94
Query: 105 NRLRFLGKVLSVERAGKPSAKNKNQDEETQ 16
N LRFLGKVLSVERA K + NK Q Q
Sbjct: 95 NGLRFLGKVLSVERASKTTEDNKPQQTGVQ 124
>ref|XP_007030218.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590641397|ref|XP_007030219.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590641400|ref|XP_007030220.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508718823|gb|EOY10720.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508718824|gb|EOY10721.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508718825|gb|EOY10722.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 479
Score = 139 bits (351), Expect = 3e-31
Identities = 69/90 (76%), Positives = 75/90 (83%)
Frame = -1
Query: 285 AAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQAQSQL 106
+ TLL+RHLPEAIPH+TL RLFSHYGASSVRPC+ G+LRNCAFVDFKNEALASQAQ QL
Sbjct: 35 SVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLRNCAFVDFKNEALASQAQRQL 94
Query: 105 NRLRFLGKVLSVERAGKPSAKNKNQDEETQ 16
N LRFLGKVLSVERA K + NK Q Q
Sbjct: 95 NGLRFLGKVLSVERASKTTEDNKPQQTGVQ 124
>ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citrus clementina]
gi|567901734|ref|XP_006443355.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
gi|568850729|ref|XP_006479053.1| PREDICTED: RNA-binding
protein 40-like isoform X1 [Citrus sinensis]
gi|557545616|gb|ESR56594.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
gi|557545617|gb|ESR56595.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
Length = 461
Score = 139 bits (350), Expect = 4e-31
Identities = 68/99 (68%), Positives = 81/99 (81%)
Frame = -1
Query: 312 GLQSEEEEWAAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEA 133
G Q+++E TLL++HLP+AIP +TLSR+FSHYGASSVRPC+ GRLRNC FVDF NE
Sbjct: 9 GPQNKQEAENLVTLLIKHLPDAIPQDTLSRIFSHYGASSVRPCSAGRLRNCVFVDFGNEP 68
Query: 132 LASQAQSQLNRLRFLGKVLSVERAGKPSAKNKNQDEETQ 16
LASQAQ QLN LRFLGKVLSVERA KP+ +NK++ E Q
Sbjct: 69 LASQAQMQLNGLRFLGKVLSVERASKPNEENKHKHFEAQ 107
>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
gi|298205172|emb|CBI17231.3| unnamed protein product
[Vitis vinifera]
Length = 463
Score = 136 bits (343), Expect = 3e-30
Identities = 70/94 (74%), Positives = 77/94 (81%)
Frame = -1
Query: 306 QSEEEEWAAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALA 127
QS E E +AATLL+RHLPEAIP +TLSRLFS YGASSVRPC GRLRNCAFVDFK+E LA
Sbjct: 12 QSFEAEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPCTSGRLRNCAFVDFKSEMLA 71
Query: 126 SQAQSQLNRLRFLGKVLSVERAGKPSAKNKNQDE 25
SQA QLN LRFLGKVL VERA KP+ +K + E
Sbjct: 72 SQALRQLNGLRFLGKVLLVERANKPTEDDKQKSE 105
>ref|XP_003624600.1| RNA-binding protein [Medicago truncatula]
gi|355499615|gb|AES80818.1| RNA-binding protein
[Medicago truncatula]
Length = 492
Score = 134 bits (338), Expect = 1e-29
Identities = 67/93 (72%), Positives = 77/93 (82%)
Frame = -1
Query: 279 ATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQAQSQLNR 100
ATLL++HLP+AIPH+TLSRL SHYGASSVRPC+ GRLRNCAFVDFKN+ LASQAQ QLN
Sbjct: 26 ATLLIKHLPDAIPHDTLSRLLSHYGASSVRPCSAGRLRNCAFVDFKNDMLASQAQRQLNG 85
Query: 99 LRFLGKVLSVERAGKPSAKNKNQDEETQYRKGS 1
L+FLGKVLS ERAGKP+ +N + Q K S
Sbjct: 86 LKFLGKVLSAERAGKPN-ENVGKSSGAQLGKDS 117
>ref|XP_004984515.1| PREDICTED: RNA-binding protein 40-like [Setaria italica]
Length = 459
Score = 132 bits (333), Expect = 4e-29
Identities = 66/93 (70%), Positives = 75/93 (80%)
Frame = -1
Query: 282 AATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQAQSQLN 103
AATLLVRHLPEAI E LSRLFSHYGA+SVRPCAGG+LRNCAFVDF++EA A+ A S LN
Sbjct: 34 AATLLVRHLPEAITQEMLSRLFSHYGATSVRPCAGGKLRNCAFVDFRDEAAANHAHSLLN 93
Query: 102 RLRFLGKVLSVERAGKPSAKNKNQDEETQYRKG 4
RLRFLGKVL VERA +P+A N + + Q G
Sbjct: 94 RLRFLGKVLIVERANRPNANNAHAKPQDQLEHG 126
>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
vinifera]
Length = 463
Score = 132 bits (333), Expect = 4e-29
Identities = 69/94 (73%), Positives = 76/94 (80%)
Frame = -1
Query: 306 QSEEEEWAAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALA 127
QS E E +AATLL+RHLPEAIP +TLSRLFS YGASSVRP GRLRNCAFVDFK+E LA
Sbjct: 12 QSFEAEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPSTSGRLRNCAFVDFKSEMLA 71
Query: 126 SQAQSQLNRLRFLGKVLSVERAGKPSAKNKNQDE 25
SQA QLN LRFLGKVL VERA KP+ +K + E
Sbjct: 72 SQALRQLNGLRFLGKVLLVERANKPTEDDKQKSE 105
>emb|CBI36673.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 132 bits (333), Expect = 4e-29
Identities = 69/94 (73%), Positives = 76/94 (80%)
Frame = -1
Query: 306 QSEEEEWAAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALA 127
QS E E +AATLL+RHLPEAIP +TLSRLFS YGASSVRP GRLRNCAFVDFK+E LA
Sbjct: 12 QSFEAEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPSTSGRLRNCAFVDFKSEMLA 71
Query: 126 SQAQSQLNRLRFLGKVLSVERAGKPSAKNKNQDE 25
SQA QLN LRFLGKVL VERA KP+ +K + E
Sbjct: 72 SQALRQLNGLRFLGKVLLVERANKPTEDDKQKSE 105
>ref|XP_006417594.1| hypothetical protein EUTSA_v10007645mg [Eutrema salsugineum]
gi|557095365|gb|ESQ35947.1| hypothetical protein
EUTSA_v10007645mg [Eutrema salsugineum]
Length = 443
Score = 130 bits (327), Expect = 2e-28
Identities = 64/102 (62%), Positives = 76/102 (74%)
Frame = -1
Query: 309 LQSEEEEWAAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEAL 130
++S E TLLVRHLP+ IPH+ +SRLFS YGAS+VRPC+GGRLRN AFVDFKNEA+
Sbjct: 18 IESNVAEPMGVTLLVRHLPDGIPHDIVSRLFSQYGASAVRPCSGGRLRNAAFVDFKNEAI 77
Query: 129 ASQAQSQLNRLRFLGKVLSVERAGKPSAKNKNQDEETQYRKG 4
ASQA QLN LRFLGKVL V+RA KP+ K+ E + G
Sbjct: 78 ASQAHRQLNGLRFLGKVLQVQRANKPNENKKSSQTEESGKDG 119
>ref|XP_004493140.1| PREDICTED: RNA-binding protein 40-like isoform X2 [Cicer arietinum]
Length = 439
Score = 130 bits (326), Expect = 3e-28
Identities = 65/95 (68%), Positives = 77/95 (81%)
Frame = -1
Query: 285 AAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQAQSQL 106
++ATLL++HLP+AIPH+TLSRL SHYGASSVRPC+ GRLRNCAFVDFKN+ LASQA QL
Sbjct: 24 SSATLLIKHLPDAIPHDTLSRLLSHYGASSVRPCSRGRLRNCAFVDFKNDMLASQAHRQL 83
Query: 105 NRLRFLGKVLSVERAGKPSAKNKNQDEETQYRKGS 1
N L+FLGKVLS ERA KP +N ++ Q K S
Sbjct: 84 NGLKFLGKVLSAERASKP-IENGDKSRGAQLGKDS 117
>ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isoform X1 [Cicer arietinum]
Length = 459
Score = 130 bits (326), Expect = 3e-28
Identities = 65/95 (68%), Positives = 77/95 (81%)
Frame = -1
Query: 285 AAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQAQSQL 106
++ATLL++HLP+AIPH+TLSRL SHYGASSVRPC+ GRLRNCAFVDFKN+ LASQA QL
Sbjct: 24 SSATLLIKHLPDAIPHDTLSRLLSHYGASSVRPCSRGRLRNCAFVDFKNDMLASQAHRQL 83
Query: 105 NRLRFLGKVLSVERAGKPSAKNKNQDEETQYRKGS 1
N L+FLGKVLS ERA KP +N ++ Q K S
Sbjct: 84 NGLKFLGKVLSAERASKP-IENGDKSRGAQLGKDS 117
>ref|XP_002892494.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297338336|gb|EFH68753.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 438
Score = 130 bits (326), Expect = 3e-28
Identities = 64/102 (62%), Positives = 77/102 (75%)
Frame = -1
Query: 306 QSEEEEWAAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALA 127
+S+ E TLLVRHLP+ IPH+ +SRLFS YGAS+VRPC+GG+LRN AFVDFKNEA A
Sbjct: 19 ESQVTEPFGVTLLVRHLPDGIPHDIVSRLFSQYGASAVRPCSGGKLRNAAFVDFKNEAFA 78
Query: 126 SQAQSQLNRLRFLGKVLSVERAGKPSAKNKNQDEETQYRKGS 1
SQA QLN LRFLGKVL V+RA KP+ K++ E KG+
Sbjct: 79 SQAHRQLNGLRFLGKVLQVQRANKPNENKKSRQIEESVTKGN 120
>ref|XP_002465331.1| hypothetical protein SORBIDRAFT_01g036600 [Sorghum bicolor]
gi|241919185|gb|EER92329.1| hypothetical protein
SORBIDRAFT_01g036600 [Sorghum bicolor]
Length = 467
Score = 130 bits (326), Expect = 3e-28
Identities = 65/89 (73%), Positives = 77/89 (86%), Gaps = 3/89 (3%)
Frame = -1
Query: 282 AATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQAQSQLN 103
AATLLVRHLPEAI E LSRLFSHYGA+SVRPC+GG+LRNCAFVDF++EA A+ A S LN
Sbjct: 42 AATLLVRHLPEAITQEMLSRLFSHYGATSVRPCSGGKLRNCAFVDFRDEAAANHAHSLLN 101
Query: 102 RLRFLGKVLSVERAGKPSAKN---KNQDE 25
RLRFLGKVL+VERA +P+A + K+QD+
Sbjct: 102 RLRFLGKVLTVERANRPNANDSHLKHQDQ 130
>ref|XP_003565980.1| PREDICTED: RNA-binding protein 40-like [Brachypodium distachyon]
Length = 455
Score = 129 bits (325), Expect = 3e-28
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = -1
Query: 285 AAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALASQAQSQL 106
A ATLLVRHLPEAI + LSRLFSHYGA++VRP GG+LRNCAFVDFK+E A+QAQS L
Sbjct: 31 APATLLVRHLPEAITQDMLSRLFSHYGATAVRPGGGGKLRNCAFVDFKDEMAANQAQSLL 90
Query: 105 NRLRFLGKVLSVERAGKPSAKNKNQDEETQYRKG 4
NRLRFLGKVL VERA +P+AKN ++ + Q G
Sbjct: 91 NRLRFLGKVLIVERANQPNAKNASEKHQEQLAHG 124
>dbj|BAH57015.1| AT1G09230 [Arabidopsis thaliana]
Length = 375
Score = 129 bits (325), Expect = 3e-28
Identities = 64/102 (62%), Positives = 77/102 (75%)
Frame = -1
Query: 306 QSEEEEWAAATLLVRHLPEAIPHETLSRLFSHYGASSVRPCAGGRLRNCAFVDFKNEALA 127
+S+ E TLLVRHLP+ IPH+ +SRLFS YGAS+VRPC+GG+LRN AFVDFKNEA A
Sbjct: 19 ESQVTEPFGVTLLVRHLPDGIPHDIVSRLFSQYGASAVRPCSGGKLRNAAFVDFKNEAFA 78
Query: 126 SQAQSQLNRLRFLGKVLSVERAGKPSAKNKNQDEETQYRKGS 1
SQA QLN LRFLGKVL V+RA KP+ K++ E KG+
Sbjct: 79 SQAHRQLNGLRFLGKVLQVQRANKPNDNKKSRQIEESVTKGN 120