BLASTX nr result

ID: Cocculus22_contig00026567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00026567
         (616 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC06141.1| Pre-mRNA-splicing factor ATP-dependent RNA helica...   161   2e-37
ref|XP_004310060.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   159   5e-37
ref|XP_007227071.1| hypothetical protein PRUPE_ppa000450mg [Prun...   159   6e-37
ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinu...   158   1e-36
ref|XP_002316148.2| hypothetical protein POPTR_0010s17940g [Popu...   158   1e-36
ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...   154   2e-35
ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   150   4e-34
ref|XP_004487236.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   146   5e-33
ref|XP_006595050.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   145   9e-33
ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   145   9e-33
ref|XP_004167772.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   143   5e-32
ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   143   5e-32
ref|XP_007022441.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   142   6e-32
ref|XP_007150398.1| hypothetical protein PHAVU_005G150000g [Phas...   140   4e-31
ref|XP_006484072.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   139   9e-31
ref|XP_006438067.1| hypothetical protein CICLE_v100305311mg, par...   139   9e-31
ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   137   3e-30
ref|XP_006849874.1| hypothetical protein AMTR_s00022p00074370 [A...   137   3e-30
ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [S...   133   4e-29
ref|XP_004957810.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   130   2e-28

>gb|EXC06141.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase [Morus
           notabilis]
          Length = 1302

 Score =  161 bits (407), Expect = 2e-37
 Identities = 76/114 (66%), Positives = 86/114 (75%)
 Frame = +2

Query: 236 DDGQGHSRGRDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSY 415
           +D   HS GR+T  RYE        RK  ++ SS R + GRSDWDDG+WEWEDTPRRD Y
Sbjct: 207 NDENYHSYGRETSGRYEQGYGGDYGRKRSRYESSKRGS-GRSDWDDGKWEWEDTPRRDGY 265

Query: 416 SVAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
           S + R H+PS SPMLVGASPDARLVSPWLGG TPHS+GS AS WDH+SPSPVPI
Sbjct: 266 SSSSRRHQPSPSPMLVGASPDARLVSPWLGGHTPHSSGSNASAWDHVSPSPVPI 319


>ref|XP_004310060.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Fragaria vesca subsp. vesca]
          Length = 1307

 Score =  159 bits (403), Expect = 5e-37
 Identities = 76/113 (67%), Positives = 86/113 (76%)
 Frame = +2

Query: 239 DGQGHSRGRDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSYS 418
           D + ++  R+   RYE +     ERK G++   SR TPGRSDWDDGRWEWE+TPRRD YS
Sbjct: 213 DNKDYNGRREERGRYEQDYGGEYERKRGRY-EGSRRTPGRSDWDDGRWEWEETPRRDGYS 271

Query: 419 VAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
              R H+PSRSPML+GASPDARLVSPWLGG TP S GS ASPWDHISPSPVPI
Sbjct: 272 NTSRHHQPSRSPMLLGASPDARLVSPWLGGTTPRS-GSGASPWDHISPSPVPI 323


>ref|XP_007227071.1| hypothetical protein PRUPE_ppa000450mg [Prunus persica]
           gi|462424007|gb|EMJ28270.1| hypothetical protein
           PRUPE_ppa000450mg [Prunus persica]
          Length = 1168

 Score =  159 bits (402), Expect = 6e-37
 Identities = 79/116 (68%), Positives = 88/116 (75%), Gaps = 5/116 (4%)
 Frame = +2

Query: 245 QGHSRGRDTPVRYE---YEQNYSRE--RKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRD 409
           Q +  G+D   R E   YEQ Y  E  RK  ++  S R TPGRSDWDDGRWEWE++PRRD
Sbjct: 70  QRYGNGKDYYRRREGGRYEQEYGGEYGRKQRRYEDSKR-TPGRSDWDDGRWEWEESPRRD 128

Query: 410 SYSVAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
           SYS   R H+PS SPML+GASPDARLVSPWLGG TPHS+GSAASPWDHISPSP PI
Sbjct: 129 SYSNTSRRHQPSPSPMLLGASPDARLVSPWLGGYTPHSSGSAASPWDHISPSPAPI 184


>ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533556|gb|EEF35296.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1269

 Score =  158 bits (400), Expect = 1e-36
 Identities = 78/116 (67%), Positives = 91/116 (78%), Gaps = 2/116 (1%)
 Frame = +2

Query: 236 DDGQGHSRGRDTPVRYEYEQNYSRE--RKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRD 409
           DD +  ++ R+   R  YE+ YSR+  RK G++   SR TPGRSDWDDGRWEWE+TPRRD
Sbjct: 174 DDREERNQKREA--RSSYEREYSRDYGRKRGRY-EDSRWTPGRSDWDDGRWEWEETPRRD 230

Query: 410 SYSVAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
           S S + R ++PS SPM VGASPDARLVSPWLGG TP STGSAASPWDHI+PSPVPI
Sbjct: 231 SRSNSSRHNQPSPSPMFVGASPDARLVSPWLGGHTPSSTGSAASPWDHIAPSPVPI 286


>ref|XP_002316148.2| hypothetical protein POPTR_0010s17940g [Populus trichocarpa]
           gi|550330040|gb|EEF02319.2| hypothetical protein
           POPTR_0010s17940g [Populus trichocarpa]
          Length = 1284

 Score =  158 bits (399), Expect = 1e-36
 Identities = 75/113 (66%), Positives = 87/113 (76%)
 Frame = +2

Query: 239 DGQGHSRGRDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSYS 418
           D +   RGR+   RYE E +    RK  ++   SR TPGRSDWDDGRWEWE+TPR+DSY+
Sbjct: 191 DREERYRGREARGRYEQEYDGDYGRKRSRY-EGSRRTPGRSDWDDGRWEWEETPRQDSYN 249

Query: 419 VAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
            + R H PS SPM VGASPDARLVSPW+GG+TP S+GSAASPWDHISPSPVPI
Sbjct: 250 TSRR-HHPSPSPMFVGASPDARLVSPWMGGQTPRSSGSAASPWDHISPSPVPI 301


>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Vitis vinifera]
          Length = 1289

 Score =  154 bits (389), Expect = 2e-35
 Identities = 74/111 (66%), Positives = 84/111 (75%)
 Frame = +2

Query: 245 QGHSRGRDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSYSVA 424
           +G +RGR     Y  E N    RK  K+   SR TPGRSDWDDGRWEWE+TP+RD +S  
Sbjct: 205 EGEARGR-----YAQEYNGQYGRKRSKY-EVSRRTPGRSDWDDGRWEWEETPQRDGHSNT 258

Query: 425 GRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
            R H+PS SPMLVG+SPDARLVSPW GG+TPH+TGSAASPWD ISPSPVPI
Sbjct: 259 SRRHQPSPSPMLVGSSPDARLVSPWFGGQTPHTTGSAASPWDTISPSPVPI 309


>ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X1 [Glycine max]
          Length = 1270

 Score =  150 bits (378), Expect = 4e-34
 Identities = 72/113 (63%), Positives = 83/113 (73%)
 Frame = +2

Query: 239 DGQGHSRGRDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSYS 418
           + +G    RD+  RY+ E    R R  G     SR TPGRSDWDDGRWEW DTPRRDS S
Sbjct: 182 ESRGSYSERDSHSRYDREYGKKRNRYEG-----SRRTPGRSDWDDGRWEWGDTPRRDSVS 236

Query: 419 VAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
            + R H+PS SPM VGASPDARLVSPWLGG TPHS+ +++SPWDH+SPSPVPI
Sbjct: 237 -SSRRHQPSPSPMFVGASPDARLVSPWLGGHTPHSSFTSSSPWDHVSPSPVPI 288


>ref|XP_004487236.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Cicer arietinum]
          Length = 1254

 Score =  146 bits (368), Expect = 5e-33
 Identities = 70/105 (66%), Positives = 81/105 (77%)
 Frame = +2

Query: 263 RDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSYSVAGRDHRP 442
           RD+  RY    +Y  +RK  K+   SR TPGRSDWD G+WEWEDTPRRDS S   R H+P
Sbjct: 189 RDSRSRY---YDYEYDRKRSKY-EGSRRTPGRSDWDHGQWEWEDTPRRDSVS-GSRRHQP 243

Query: 443 SRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
           S SPM VGASPDARLVSPWLGG TPHS+ +++SPWDH+SPSPVPI
Sbjct: 244 SPSPMFVGASPDARLVSPWLGGHTPHSSFTSSSPWDHVSPSPVPI 288


>ref|XP_006595050.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X2 [Glycine max]
           gi|571503064|ref|XP_006595051.1| PREDICTED:
           pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X3 [Glycine max]
          Length = 1271

 Score =  145 bits (366), Expect = 9e-33
 Identities = 72/114 (63%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
 Frame = +2

Query: 239 DGQGHSRGRDTPVRYEYEQNYSRERKHGKHASSSRNTP-GRSDWDDGRWEWEDTPRRDSY 415
           + +G    RD+  RY+ E    R R  G     SR TP GRSDWDDGRWEW DTPRRDS 
Sbjct: 182 ESRGSYSERDSHSRYDREYGKKRNRYEG-----SRRTPAGRSDWDDGRWEWGDTPRRDSV 236

Query: 416 SVAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
           S + R H+PS SPM VGASPDARLVSPWLGG TPHS+ +++SPWDH+SPSPVPI
Sbjct: 237 S-SSRRHQPSPSPMFVGASPDARLVSPWLGGHTPHSSFTSSSPWDHVSPSPVPI 289


>ref|XP_003547002.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X1 [Glycine max]
          Length = 1272

 Score =  145 bits (366), Expect = 9e-33
 Identities = 70/113 (61%), Positives = 81/113 (71%)
 Frame = +2

Query: 239 DGQGHSRGRDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSYS 418
           + +G    RD+  RY+ E    R R  G     SR  PGRSDWDDG+WEW DTPRRDS S
Sbjct: 184 ESKGSYSERDSHSRYDREYGRKRNRYEG-----SRRMPGRSDWDDGQWEWGDTPRRDSVS 238

Query: 419 VAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
            + R H+PS SPM VGASPDARLVSPWLGG TPHS+ ++ SPWDH+SPSPVPI
Sbjct: 239 -SSRRHQPSPSPMFVGASPDARLVSPWLGGHTPHSSFTSPSPWDHVSPSPVPI 290


>ref|XP_004167772.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like, partial [Cucumis sativus]
          Length = 1178

 Score =  143 bits (360), Expect = 5e-32
 Identities = 74/124 (59%), Positives = 87/124 (70%), Gaps = 14/124 (11%)
 Frame = +2

Query: 248 GHSRGRDTPV--RYEYEQNYSRE--RKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSY 415
           GH  G D P   R  Y++++ RE  RK  ++  SSR TPGRSDWDDGRWEWE+TPRRD  
Sbjct: 71  GHGDG-DEPYYGRSRYQRDFGRENERKRSRY-ESSRRTPGRSDWDDGRWEWEETPRRDGR 128

Query: 416 SV----------AGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPS 565
           S           + R ++PS SPM VGASPDARLVSPW GG TP+STGS+ASPWD ISPS
Sbjct: 129 SEETPRRDGRSNSSRHYQPSPSPMYVGASPDARLVSPWFGGNTPNSTGSSASPWDQISPS 188

Query: 566 PVPI 577
           PVP+
Sbjct: 189 PVPV 192


>ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Cucumis sativus]
          Length = 1298

 Score =  143 bits (360), Expect = 5e-32
 Identities = 74/124 (59%), Positives = 87/124 (70%), Gaps = 14/124 (11%)
 Frame = +2

Query: 248 GHSRGRDTPV--RYEYEQNYSRE--RKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSY 415
           GH  G D P   R  Y++++ RE  RK  ++  SSR TPGRSDWDDGRWEWE+TPRRD  
Sbjct: 191 GHGDG-DEPYYGRSRYQRDFGRENERKRSRY-ESSRRTPGRSDWDDGRWEWEETPRRDGR 248

Query: 416 SV----------AGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPS 565
           S           + R ++PS SPM VGASPDARLVSPW GG TP+STGS+ASPWD ISPS
Sbjct: 249 SEETPRRDGRSNSSRHYQPSPSPMYVGASPDARLVSPWFGGNTPNSTGSSASPWDQISPS 308

Query: 566 PVPI 577
           PVP+
Sbjct: 309 PVPV 312


>ref|XP_007022441.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1
           [Theobroma cacao] gi|590612647|ref|XP_007022442.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 isoform 1 [Theobroma cacao]
           gi|508722069|gb|EOY13966.1| Pre-mRNA-splicing factor
           ATP-dependent RNA helicase PRP16 isoform 1 [Theobroma
           cacao] gi|508722070|gb|EOY13967.1| Pre-mRNA-splicing
           factor ATP-dependent RNA helicase PRP16 isoform 1
           [Theobroma cacao]
          Length = 1279

 Score =  142 bits (359), Expect = 6e-32
 Identities = 72/124 (58%), Positives = 81/124 (65%), Gaps = 10/124 (8%)
 Frame = +2

Query: 236 DDGQGHSRGRDTPVRYE--------YEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWE 391
           DD +  SR       YE        YE+ Y R    G    S + TPGRSDWDDG+WEWE
Sbjct: 177 DDSRSDSRNARKRHYYEDRRDTHGGYEEYYGRS---GSRYESRKRTPGRSDWDDGKWEWE 233

Query: 392 DTPRRDSYSVAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTG--SAASPWDHISPS 565
           DTP RD+YS + R H+PS SPM VGASPDARLVSPW+G RTP S G  S ASPWD+ SPS
Sbjct: 234 DTPHRDNYSGSNRRHQPSPSPMFVGASPDARLVSPWMGDRTPRSAGTSSGASPWDYASPS 293

Query: 566 PVPI 577
           PVPI
Sbjct: 294 PVPI 297


>ref|XP_007150398.1| hypothetical protein PHAVU_005G150000g [Phaseolus vulgaris]
           gi|561023662|gb|ESW22392.1| hypothetical protein
           PHAVU_005G150000g [Phaseolus vulgaris]
          Length = 1272

 Score =  140 bits (352), Expect = 4e-31
 Identities = 64/105 (60%), Positives = 79/105 (75%)
 Frame = +2

Query: 263 RDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSYSVAGRDHRP 442
           RD+  RY+ +    R R        SR TPGRSDWDDGRW+W ++PRRDS S + R H+P
Sbjct: 189 RDSHSRYDRDNGRKRSRYE-----DSRRTPGRSDWDDGRWDWGESPRRDSVS-SSRRHQP 242

Query: 443 SRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
           S SPM +GASPDARLVSPWLGG TPHS+ +++SPWDH+SPSP+PI
Sbjct: 243 SPSPMFLGASPDARLVSPWLGGNTPHSSFNSSSPWDHVSPSPIPI 287


>ref|XP_006484072.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Citrus sinensis]
          Length = 1284

 Score =  139 bits (349), Expect = 9e-31
 Identities = 70/113 (61%), Positives = 79/113 (69%)
 Frame = +2

Query: 239 DGQGHSRGRDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSYS 418
           D +G  RGR+   R E E      RK  K+   +R TPGRSDWDDGRWEWEDTPRR+ YS
Sbjct: 193 DSKGRYRGREARDRDEPEYGGEYGRKRSKY-DGTRRTPGRSDWDDGRWEWEDTPRREGYS 251

Query: 419 VAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
            + + ++PS SPM VGASPDARLVSP     TP S G AASPWDHISPSPVPI
Sbjct: 252 NSSKRYQPSPSPMFVGASPDARLVSPL---STPRSNGYAASPWDHISPSPVPI 301


>ref|XP_006438067.1| hypothetical protein CICLE_v100305311mg, partial [Citrus
           clementina] gi|557540263|gb|ESR51307.1| hypothetical
           protein CICLE_v100305311mg, partial [Citrus clementina]
          Length = 402

 Score =  139 bits (349), Expect = 9e-31
 Identities = 70/113 (61%), Positives = 79/113 (69%)
 Frame = +2

Query: 239 DGQGHSRGRDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSYS 418
           D +G  RGR+   R E E      RK  K+   +R TPGRSDWDDGRWEWEDTPRR+ YS
Sbjct: 193 DSKGRYRGREARDRDEPEYGGEYGRKRSKY-DGTRRTPGRSDWDDGRWEWEDTPRREGYS 251

Query: 419 VAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
            + + ++PS SPM VGASPDARLVSP     TP S G AASPWDHISPSPVPI
Sbjct: 252 NSSKRYQPSPSPMFVGASPDARLVSPL---STPRSNGYAASPWDHISPSPVPI 301


>ref|XP_003597474.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
           truncatula] gi|355486522|gb|AES67725.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Medicago truncatula]
          Length = 1269

 Score =  137 bits (345), Expect = 3e-30
 Identities = 69/113 (61%), Positives = 80/113 (70%)
 Frame = +2

Query: 239 DGQGHSRGRDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRDSYS 418
           D +    GRD+  RY Y+  Y R+R   +    SR TPGRSDWD GRWEWEDTPRRD  S
Sbjct: 182 DSRESYSGRDSRSRY-YDHEYDRKRNRYE---GSRRTPGRSDWDHGRWEWEDTPRRDGVS 237

Query: 419 VAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
            + R H+PS SPM VGASPDARLVSPW    TPHS+ ++ SPWDH+SPSPVPI
Sbjct: 238 -SSRRHQPSPSPMFVGASPDARLVSPW---HTPHSSYNSPSPWDHVSPSPVPI 286


>ref|XP_006849874.1| hypothetical protein AMTR_s00022p00074370 [Amborella trichopoda]
           gi|548853472|gb|ERN11455.1| hypothetical protein
           AMTR_s00022p00074370 [Amborella trichopoda]
          Length = 1340

 Score =  137 bits (344), Expect = 3e-30
 Identities = 69/116 (59%), Positives = 85/116 (73%), Gaps = 3/116 (2%)
 Frame = +2

Query: 239 DGQGHSRGRDTPVRYE-YEQNYSRE--RKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRD 409
           DG    RGR++  R++ Y+Q Y+ E  RK  + A SSR++  +SDWDDG WEWEDTPRRD
Sbjct: 240 DGDKDYRGRESHRRHDGYDQMYAGEHGRKRSRDAYSSRSS-SKSDWDDGGWEWEDTPRRD 298

Query: 410 SYSVAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
           S  V  R+H P+ SPML GASPDARLVSPWLGG TP+ T  +ASPWD ++PSP PI
Sbjct: 299 SPHVPSRNHLPAHSPMLAGASPDARLVSPWLGGHTPY-TSVSASPWDSVTPSPAPI 353


>ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [Sorghum bicolor]
           gi|241926289|gb|EER99433.1| hypothetical protein
           SORBIDRAFT_02g034295 [Sorghum bicolor]
          Length = 1271

 Score =  133 bits (335), Expect = 4e-29
 Identities = 68/120 (56%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
 Frame = +2

Query: 236 DDGQGHSR----GRDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPR 403
           DD + H+R    GR T + Y      + +R   +H+S S  TP RSDWDDGRWEWEDTPR
Sbjct: 181 DDRESHTRRDERGRSTSIEY------TNKRSRHEHSSRSSRTPARSDWDDGRWEWEDTPR 234

Query: 404 RD--SYSVAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
           RD        R   P+RSPML  ASPDARLVSPWLGG TP    SAASPWD++SPSP PI
Sbjct: 235 RDYRDNRPGSRRQHPTRSPMLAAASPDARLVSPWLGGSTPR---SAASPWDNVSPSPAPI 291


>ref|XP_004957810.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like isoform X2 [Setaria italica]
          Length = 1265

 Score =  130 bits (328), Expect = 2e-28
 Identities = 68/116 (58%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
 Frame = +2

Query: 236 DDGQGHSRGRDTPVRYEYEQNYSRERKHGKHASSSRNTPGRSDWDDGRWEWEDTPRRD-- 409
           DD + H+R RD   R       ++  +HG H S S  TP RSDWDDGRWEWEDTPRRD  
Sbjct: 176 DDRESHTR-RDERERSTSIDYANKRSRHG-HGSRSSRTPARSDWDDGRWEWEDTPRRDYR 233

Query: 410 SYSVAGRDHRPSRSPMLVGASPDARLVSPWLGGRTPHSTGSAASPWDHISPSPVPI 577
                 R   P+RSPML  ASPDARLVSPWLGG TP    SAASPWD++SPSP PI
Sbjct: 234 DDRPGSRRQHPTRSPMLAAASPDARLVSPWLGGNTPR---SAASPWDNVSPSPAPI 286


Top