BLASTX nr result
ID: Cocculus22_contig00026515
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00026515
(254 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu... 138 7e-31
ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putativ... 138 7e-31
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 137 1e-30
emb|CBI26203.3| unnamed protein product [Vitis vinifera] 137 1e-30
ref|XP_007034658.1| P-loop containing nucleoside triphosphate hy... 134 1e-29
ref|XP_007034657.1| P-loop containing nucleoside triphosphate hy... 134 1e-29
ref|XP_007034656.1| P-loop containing nucleoside triphosphate hy... 134 1e-29
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not... 131 8e-29
gb|EYU41518.1| hypothetical protein MIMGU_mgv1a005973mg [Mimulus... 130 1e-28
ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citr... 130 2e-28
ref|XP_004507705.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 130 2e-28
ref|XP_004296920.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 130 2e-28
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ... 129 5e-28
gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' ... 129 5e-28
gb|AAG34882.1|AF261027_1 putative chloroplast RNA helicase VDL' ... 129 5e-28
gb|AAG38496.1|AF261032_4 putative chloroplast RNA helicase VDL' ... 129 5e-28
ref|XP_006489327.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 128 7e-28
ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 128 7e-28
ref|XP_006836561.1| hypothetical protein AMTR_s00131p00060240 [A... 128 7e-28
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i... 127 1e-27
>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
gi|550329495|gb|EEF01963.2| hypothetical protein
POPTR_0010s10230g [Populus trichocarpa]
Length = 477
Score = 138 bits (348), Expect = 7e-31
Identities = 65/76 (85%), Positives = 70/76 (92%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FNSSKQ SLRKLLTSYSS NSRQTVFASASIPQH RF+YDCIQQKWTK DVVHVHV
Sbjct: 239 DFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFLYDCIQQKWTKRDVVHVHV 298
Query: 72 NPIEPMPSRLRHRFVV 25
NPIEPMP+ L+HRFV+
Sbjct: 299 NPIEPMPTCLQHRFVI 314
>ref|XP_002517195.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223543830|gb|EEF45358.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 476
Score = 138 bits (348), Expect = 7e-31
Identities = 63/76 (82%), Positives = 71/76 (93%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FNSSKQ SLRKLLTSYSS NSRQTVFASASIPQHRRF+YDCIQQKWTK+D VHVH+
Sbjct: 238 DFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHRRFLYDCIQQKWTKSDAVHVHI 297
Query: 72 NPIEPMPSRLRHRFVV 25
NP++PMPS L+HRFV+
Sbjct: 298 NPVQPMPSCLQHRFVI 313
>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Vitis vinifera]
Length = 482
Score = 137 bits (346), Expect = 1e-30
Identities = 64/76 (84%), Positives = 71/76 (93%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FN+SKQ SLRKLLTSYSS N+RQTVFASASIPQHRRF++DCIQQKWTK+DVVHVHV
Sbjct: 240 DFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHV 299
Query: 72 NPIEPMPSRLRHRFVV 25
NPIEPMPS L HRFV+
Sbjct: 300 NPIEPMPSSLHHRFVI 315
>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 137 bits (346), Expect = 1e-30
Identities = 64/76 (84%), Positives = 71/76 (93%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FN+SKQ SLRKLLTSYSS N+RQTVFASASIPQHRRF++DCIQQKWTK+DVVHVHV
Sbjct: 244 DFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHV 303
Query: 72 NPIEPMPSRLRHRFVV 25
NPIEPMPS L HRFV+
Sbjct: 304 NPIEPMPSSLHHRFVI 319
>ref|XP_007034658.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 3 [Theobroma cacao]
gi|508713687|gb|EOY05584.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 3
[Theobroma cacao]
Length = 351
Score = 134 bits (338), Expect = 1e-29
Identities = 62/76 (81%), Positives = 70/76 (92%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FNSSKQ S+RKLLTSYSS N+RQTVFASASIPQHRRF++DCIQQKWTK DVVHVHV
Sbjct: 235 DFIFNSSKQVSSIRKLLTSYSSCNNRQTVFASASIPQHRRFLHDCIQQKWTKGDVVHVHV 294
Query: 72 NPIEPMPSRLRHRFVV 25
NP++PMPS L HRFV+
Sbjct: 295 NPVKPMPSCLLHRFVI 310
>ref|XP_007034657.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 2 [Theobroma cacao]
gi|508713686|gb|EOY05583.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 2
[Theobroma cacao]
Length = 409
Score = 134 bits (338), Expect = 1e-29
Identities = 63/78 (80%), Positives = 70/78 (89%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FNSSKQ S+RKLLTSYSS N+RQTVFASASIPQHRRF++DCIQQKWTK DVVHVHV
Sbjct: 235 DFIFNSSKQVSSIRKLLTSYSSCNNRQTVFASASIPQHRRFLHDCIQQKWTKGDVVHVHV 294
Query: 72 NPIEPMPSRLRHRFVVRK 19
NP++PMPS L HRFV K
Sbjct: 295 NPVKPMPSCLLHRFVSEK 312
>ref|XP_007034656.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 1 [Theobroma cacao]
gi|508713685|gb|EOY05582.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 1
[Theobroma cacao]
Length = 477
Score = 134 bits (338), Expect = 1e-29
Identities = 62/76 (81%), Positives = 70/76 (92%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FNSSKQ S+RKLLTSYSS N+RQTVFASASIPQHRRF++DCIQQKWTK DVVHVHV
Sbjct: 235 DFIFNSSKQVSSIRKLLTSYSSCNNRQTVFASASIPQHRRFLHDCIQQKWTKGDVVHVHV 294
Query: 72 NPIEPMPSRLRHRFVV 25
NP++PMPS L HRFV+
Sbjct: 295 NPVKPMPSCLLHRFVI 310
>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
Length = 464
Score = 131 bits (330), Expect = 8e-29
Identities = 60/76 (78%), Positives = 71/76 (93%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FNSSKQ SLRKLLTSYS+I++RQTVFASASIPQHRRF+++C+QQKWTK++VVHVHV
Sbjct: 226 DFIFNSSKQVSSLRKLLTSYSTISNRQTVFASASIPQHRRFLHECVQQKWTKSNVVHVHV 285
Query: 72 NPIEPMPSRLRHRFVV 25
NPIEPMPS L H FV+
Sbjct: 286 NPIEPMPSCLHHNFVI 301
>gb|EYU41518.1| hypothetical protein MIMGU_mgv1a005973mg [Mimulus guttatus]
Length = 463
Score = 130 bits (328), Expect = 1e-28
Identities = 60/76 (78%), Positives = 69/76 (90%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FNSS++ SL+KLLT +SSIN+RQT+FASASIPQHRRFVYDCIQQKWTK DVVHVHV
Sbjct: 225 DFMFNSSEEVSSLKKLLTIHSSINNRQTIFASASIPQHRRFVYDCIQQKWTKADVVHVHV 284
Query: 72 NPIEPMPSRLRHRFVV 25
NP+ PMPS L HRFV+
Sbjct: 285 NPVNPMPSCLYHRFVI 300
>ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citrus clementina]
gi|557521726|gb|ESR33093.1| hypothetical protein
CICLE_v10004897mg [Citrus clementina]
Length = 473
Score = 130 bits (327), Expect = 2e-28
Identities = 61/76 (80%), Positives = 69/76 (90%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DFLFNSSKQ SL+KLL SYSS N+RQTVFASASIPQHRRF++DCIQQKWTK+DVVHVHV
Sbjct: 231 DFLFNSSKQVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHDCIQQKWTKSDVVHVHV 290
Query: 72 NPIEPMPSRLRHRFVV 25
N I+P+PS L HRFV+
Sbjct: 291 NAIKPLPSCLHHRFVI 306
>ref|XP_004507705.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Cicer arietinum]
Length = 470
Score = 130 bits (326), Expect = 2e-28
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DFLFNSSKQA SLRK+LT+YSS N+RQTVFASASIP H RF++D +QQKWTK DV+H+HV
Sbjct: 232 DFLFNSSKQASSLRKILTTYSSCNNRQTVFASASIPHHNRFLHDAVQQKWTKRDVIHIHV 291
Query: 72 NPIEPMPSRLRHRFVV 25
+P+EPMPSRL HRF+V
Sbjct: 292 SPVEPMPSRLYHRFIV 307
>ref|XP_004296920.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 395
Score = 130 bits (326), Expect = 2e-28
Identities = 60/76 (78%), Positives = 69/76 (90%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+F S K+ SLRKLLTSYSSINSRQTVFASASIPQHRRF++DCIQQKWTKND +H+HV
Sbjct: 158 DFMFGS-KEVSSLRKLLTSYSSINSRQTVFASASIPQHRRFLHDCIQQKWTKNDAIHIHV 216
Query: 72 NPIEPMPSRLRHRFVV 25
NP++PMPS L HRFV+
Sbjct: 217 NPVQPMPSCLHHRFVI 232
>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
tabacum]
Length = 466
Score = 129 bits (323), Expect = 5e-28
Identities = 59/76 (77%), Positives = 68/76 (89%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FNSSK+ SL++LLTSYSS +RQT+FASASIPQHRRF+YDC+QQKWTK DVVHVHV
Sbjct: 228 DFMFNSSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHV 287
Query: 72 NPIEPMPSRLRHRFVV 25
N +EPMPS L HRFVV
Sbjct: 288 NSVEPMPSCLHHRFVV 303
>gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
tabacum]
Length = 365
Score = 129 bits (323), Expect = 5e-28
Identities = 59/76 (77%), Positives = 68/76 (89%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FNSSK+ SL++LLTSYSS +RQT+FASASIPQHRRF+YDC+QQKWTK DVVHVHV
Sbjct: 228 DFMFNSSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHV 287
Query: 72 NPIEPMPSRLRHRFVV 25
N +EPMPS L HRFVV
Sbjct: 288 NSVEPMPSCLHHRFVV 303
>gb|AAG34882.1|AF261027_1 putative chloroplast RNA helicase VDL' isoform 4 [Nicotiana
tabacum]
Length = 425
Score = 129 bits (323), Expect = 5e-28
Identities = 59/76 (77%), Positives = 68/76 (89%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FNSSK+ SL++LLTSYSS +RQT+FASASIPQHRRF+YDC+QQKWTK DVVHVHV
Sbjct: 187 DFMFNSSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHV 246
Query: 72 NPIEPMPSRLRHRFVV 25
N +EPMPS L HRFVV
Sbjct: 247 NSVEPMPSCLHHRFVV 262
>gb|AAG38496.1|AF261032_4 putative chloroplast RNA helicase VDL' isoform 4 [Nicotiana
tabacum]
Length = 324
Score = 129 bits (323), Expect = 5e-28
Identities = 59/76 (77%), Positives = 68/76 (89%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FNSSK+ SL++LLTSYSS +RQT+FASASIPQHRRF+YDC+QQKWTK DVVHVHV
Sbjct: 187 DFMFNSSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHV 246
Query: 72 NPIEPMPSRLRHRFVV 25
N +EPMPS L HRFVV
Sbjct: 247 NSVEPMPSCLHHRFVV 262
>ref|XP_006489327.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 322
Score = 128 bits (322), Expect = 7e-28
Identities = 60/76 (78%), Positives = 69/76 (90%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DFLFNSSKQ SL+KLL SYSS N+RQTVFASASIPQHRRF+++CIQQKWTK+DVVHVHV
Sbjct: 80 DFLFNSSKQVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHV 139
Query: 72 NPIEPMPSRLRHRFVV 25
N I+P+PS L HRFV+
Sbjct: 140 NAIKPLPSCLHHRFVI 155
>ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 473
Score = 128 bits (322), Expect = 7e-28
Identities = 60/76 (78%), Positives = 69/76 (90%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DFLFNSSKQ SL+KLL SYSS N+RQTVFASASIPQHRRF+++CIQQKWTK+DVVHVHV
Sbjct: 231 DFLFNSSKQVSSLKKLLASYSSCNNRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHV 290
Query: 72 NPIEPMPSRLRHRFVV 25
N I+P+PS L HRFV+
Sbjct: 291 NAIKPLPSCLHHRFVI 306
>ref|XP_006836561.1| hypothetical protein AMTR_s00131p00060240 [Amborella trichopoda]
gi|548839100|gb|ERM99414.1| hypothetical protein
AMTR_s00131p00060240 [Amborella trichopoda]
Length = 507
Score = 128 bits (322), Expect = 7e-28
Identities = 59/80 (73%), Positives = 70/80 (87%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DFLFNSSKQ +SLRKLLTSYS+ + RQT+F+SASIPQH+ FV+DCIQQKWTK DVVH+H+
Sbjct: 261 DFLFNSSKQVHSLRKLLTSYSAADRRQTIFSSASIPQHKHFVHDCIQQKWTKRDVVHIHL 320
Query: 72 NPIEPMPSRLRHRFVVRKIE 13
+P+EPMPSRL H FV K E
Sbjct: 321 HPVEPMPSRLCHIFVTCKKE 340
>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
gi|11385590|gb|AAG34876.1|AF261021_1 putative
chloroplast RNA helicase VDL isoform 1 [Nicotiana
tabacum]
Length = 466
Score = 127 bits (320), Expect = 1e-27
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = -3
Query: 252 DFLFNSSKQAYSLRKLLTSYSSINSRQTVFASASIPQHRRFVYDCIQQKWTKNDVVHVHV 73
DF+FNSSK+ SL++LLTSYS+ +RQT+FASASIPQHRRF+YDC+QQKWTK DVVHVHV
Sbjct: 228 DFMFNSSKEISSLKRLLTSYSTSKNRQTIFASASIPQHRRFLYDCVQQKWTKADVVHVHV 287
Query: 72 NPIEPMPSRLRHRFVV 25
N +EPMPS L HRFVV
Sbjct: 288 NSVEPMPSCLHHRFVV 303